Click here to switch to the map view.

The map label for this gene is gap [H]

Identifier: 239617386

GI number: 239617386

Start: 1052301

End: 1053317

Strand: Reverse

Name: gap [H]

Synonym: Kole_0996

Alternate gene names: 239617386

Gene position: 1053317-1052301 (Counterclockwise)

Preceding gene: 239617387

Following gene: 239617385

Centisome position: 45.75

GC content: 45.13

Gene sequence:

>1017_bases
ATGGTAAAGGTCGGTGTAGTAGGTTATGGAACCATAGGGCAGAGACTTGCCGATGGAGTAGCATTTCAAGGTGATATGGA
GCTTGTGGGGGTTGCCGATATTGGACCCACTCTTCCCGTTAGAGCACTGAAGGAAAAAGGAATGCCCTACGATTTTTATC
TTGCTGTACCGGAAAACAGGGAGAAACTTGAAGAAGCCGGAATACCAATTTCCGGGACTCTGGAAGAACTAATCCAGAAG
GTCGATATCATTCTTGATGCTACAAATGCCGGTGTTGGCGCAAAGAATAAGGTTCTTTATGAAAAGTACGGGAAAAAAGC
CATCTTCCAGGGTGGAGAAAAAACAAGTGTAGCGGATGTTTTCTTCCATGGATATGCCAATTACGAAAAGGGAATCGGTA
AACAGTTTTTGAAACTCACATCCTGTAACACAACCGGACTCATTCGCTCTGTTGATTGTCTCGACAGGGTCGTTGGAATA
GATAGCGTAATGATCCATATAGTCAGACGTGTAGCTGATCCAGGTGATTATCACAGGGGGCTTACCAATGCCCTTAAAAT
CGATCCTGTTCCCAATCACCAGGCTGTTGACCTTATGCTGATAATGCCTCATGTAAAAGCTACGGGTGTTCTCGTTCACA
CACCGGTTACCCACGGACATATAATCACCGTATTTGCCAAACCAAAAAAGAAGATAACCAGAGAGGAAGTCCTCGAAAGT
TTCAGAGCCCATCCAAGAATCAGAGTAGTGAGAATCGCGGACGGATTCCTCGGTAACGCATCTCTCTTCAAATACGCCAG
AGATCTTGGAAACCCCAGAGGAGATATGTACGAGATAGCGATCTGGGAAGAAACGGTAACGATCTTTGAAGATCACATTA
TCTACGCCTTGAATATTCCTCAAGAAGCCGTCGTTATCCCTGAGACGATAGATGGTATCAGAGCAGCCATGGAAATGCAA
ACAGACAGACTTGAGGCTGTTGGGCTCACAAACAAATACTTGAAGATAGGGGGATAG

Upstream 100 bases:

>100_bases
GACCTGTTGAACAACGAAGACATAAGGCCTACACAGATATCGTTGTTTACCAACATTGTTATTCGAGACAGCGTGAAACT
ATAAACAGGAGGGATTTCAA

Downstream 100 bases:

>100_bases
TTTCCATGAGGGAGCTTCCTATCAATACTCTCGATGATTTCGATTTTAACAACAAGACCGTGATACTGAGAATAGACATA
AACTCTCCCATAGATCCAAA

Product: glyceraldehyde-3-phosphate dehydrogenase, type II

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MVKVGVVGYGTIGQRLADGVAFQGDMELVGVADIGPTLPVRALKEKGMPYDFYLAVPENREKLEEAGIPISGTLEELIQK
VDIILDATNAGVGAKNKVLYEKYGKKAIFQGGEKTSVADVFFHGYANYEKGIGKQFLKLTSCNTTGLIRSVDCLDRVVGI
DSVMIHIVRRVADPGDYHRGLTNALKIDPVPNHQAVDLMLIMPHVKATGVLVHTPVTHGHIITVFAKPKKKITREEVLES
FRAHPRIRVVRIADGFLGNASLFKYARDLGNPRGDMYEIAIWEETVTIFEDHIIYALNIPQEAVVIPETIDGIRAAMEMQ
TDRLEAVGLTNKYLKIGG

Sequences:

>Translated_338_residues
MVKVGVVGYGTIGQRLADGVAFQGDMELVGVADIGPTLPVRALKEKGMPYDFYLAVPENREKLEEAGIPISGTLEELIQK
VDIILDATNAGVGAKNKVLYEKYGKKAIFQGGEKTSVADVFFHGYANYEKGIGKQFLKLTSCNTTGLIRSVDCLDRVVGI
DSVMIHIVRRVADPGDYHRGLTNALKIDPVPNHQAVDLMLIMPHVKATGVLVHTPVTHGHIITVFAKPKKKITREEVLES
FRAHPRIRVVRIADGFLGNASLFKYARDLGNPRGDMYEIAIWEETVTIFEDHIIYALNIPQEAVVIPETIDGIRAAMEMQ
TDRLEAVGLTNKYLKIGG
>Mature_338_residues
MVKVGVVGYGTIGQRLADGVAFQGDMELVGVADIGPTLPVRALKEKGMPYDFYLAVPENREKLEEAGIPISGTLEELIQK
VDIILDATNAGVGAKNKVLYEKYGKKAIFQGGEKTSVADVFFHGYANYEKGIGKQFLKLTSCNTTGLIRSVDCLDRVVGI
DSVMIHIVRRVADPGDYHRGLTNALKIDPVPNHQAVDLMLIMPHVKATGVLVHTPVTHGHIITVFAKPKKKITREEVLES
FRAHPRIRVVRIADGFLGNASLFKYARDLGNPRGDMYEIAIWEETVTIFEDHIIYALNIPQEAVVIPETIDGIRAAMEMQ
TDRLEAVGLTNKYLKIGG

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.59 [H]

Molecular weight: Translated: 37176; Mature: 37176

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVGVVGYGTIGQRLADGVAFQGDMELVGVADIGPTLPVRALKEKGMPYDFYLAVPENR
CEEEEEEECCHHHHHHHCCCEECCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCH
EKLEEAGIPISGTLEELIQKVDIILDATNAGVGAKNKVLYEKYGKKAIFQGGEKTSVADV
HHHHHCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCHHHHCCCCCCCHHHH
FFHGYANYEKGIGKQFLKLTSCNTTGLIRSVDCLDRVVGIDSVMIHIVRRVADPGDYHRG
HHHCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
LTNALKIDPVPNHQAVDLMLIMPHVKATGVLVHTPVTHGHIITVFAKPKKKITREEVLES
CCCCEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHH
FRAHPRIRVVRIADGFLGNASLFKYARDLGNPRGDMYEIAIWEETVTIFEDHIIYALNIP
HHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHEEEECCEEEEEECC
QEAVVIPETIDGIRAAMEMQTDRLEAVGLTNKYLKIGG
CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MVKVGVVGYGTIGQRLADGVAFQGDMELVGVADIGPTLPVRALKEKGMPYDFYLAVPENR
CEEEEEEECCHHHHHHHCCCEECCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCH
EKLEEAGIPISGTLEELIQKVDIILDATNAGVGAKNKVLYEKYGKKAIFQGGEKTSVADV
HHHHHCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCHHHHCCCCCCCHHHH
FFHGYANYEKGIGKQFLKLTSCNTTGLIRSVDCLDRVVGIDSVMIHIVRRVADPGDYHRG
HHHCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
LTNALKIDPVPNHQAVDLMLIMPHVKATGVLVHTPVTHGHIITVFAKPKKKITREEVLES
CCCCEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHH
FRAHPRIRVVRIADGFLGNASLFKYARDLGNPRGDMYEIAIWEETVTIFEDHIIYALNIP
HHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHEEEECCEEEEEECC
QEAVVIPETIDGIRAAMEMQTDRLEAVGLTNKYLKIGG
CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2492940 [H]