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The map label for this gene is iolB [H]

Identifier: 239617380

GI number: 239617380

Start: 1046049

End: 1046846

Strand: Reverse

Name: iolB [H]

Synonym: Kole_0990

Alternate gene names: 239617380

Gene position: 1046846-1046049 (Counterclockwise)

Preceding gene: 239617381

Following gene: 239617379

Centisome position: 45.47

GC content: 43.48

Gene sequence:

>798_bases
ATGTTTCTACTCAAACCAGATGGAATTTTTCAATGGGGATATACGTCAATTACAGAGGAAGGAGAAGCATCTGGAAATAC
CATGATGGATTTTGGCATCTTGCGTCTCGAAGCTGGTAAAACCTATGAATGTTCCCTTCCGAAAGAACGTGCATTTCTCT
TGCTAAGTGGAAATGTTATTTTCTTTTTCAATGAAGAGAAACGAGAAGCAAAAAGAAATTCCCTTTTTGATGAAGGCCCA
ACGTGTTTGCACGTCCCACAAAAGACTCCCGTGAAGATCGAGGCTGTGAGTGATTCGGAGATCGCGATCGTTCGCACGAC
TAACGATAAAACTTTTCCATCGCGTTTGTACACCCCATACGATGTAGAAGACGAATACCGCGGGCAGGGTACCATGCAGG
AAACCTCAACCCGTATAGTCAGAACTATATTCGACATAAACAACGCACCAGACGCGAAACTGGTTCTTGGCGAGGTTGTG
AATTTTCCGGGTAAATGGTCGAGTTACCCGCCACATCACCATCCTCAACCAGAAATCTATCACTACCGTTTCTTACCCGA
ACAGGGTTTTGGTTTCGCGATGCTTGGAGATGAAGTTTTTAAAGTCAGAAATGGCTACACAGTGAAAATACTAAACGATC
TATCACACCCTCAGGTAAGTGCTCCTGGTTATGCAATGTATTACATATGGGCAATTCGCCATCTTGATGATAATCCTTAC
ATAACACCGGTTTTCGAACCAGAACATACATGGGTCATGAACAAGAATGCGCCCATATGGACAAAGAGAGGTGAATGA

Upstream 100 bases:

>100_bases
ACCGTAGATCTGGGCGGAAATTCAACTACCCAGGAAGTAGGAGAGGCCATAAGAAATAAAATGAGAGAACTCGTGTGAAT
TTCAGAGGGGGCGGATGGTG

Downstream 100 bases:

>100_bases
TCCTTGAAAACAATTCGGTTGACTACGGCTCAAGCCTTACTGAAATTTCTTGATGCTCAGTATGTTGAATTGGACGGGGA
AGAACACAAATTTGTCAAAG

Product: Myo-inositol catabolism IolB domain protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFLLKPDGIFQWGYTSITEEGEASGNTMMDFGILRLEAGKTYECSLPKERAFLLLSGNVIFFFNEEKREAKRNSLFDEGP
TCLHVPQKTPVKIEAVSDSEIAIVRTTNDKTFPSRLYTPYDVEDEYRGQGTMQETSTRIVRTIFDINNAPDAKLVLGEVV
NFPGKWSSYPPHHHPQPEIYHYRFLPEQGFGFAMLGDEVFKVRNGYTVKILNDLSHPQVSAPGYAMYYIWAIRHLDDNPY
ITPVFEPEHTWVMNKNAPIWTKRGE

Sequences:

>Translated_265_residues
MFLLKPDGIFQWGYTSITEEGEASGNTMMDFGILRLEAGKTYECSLPKERAFLLLSGNVIFFFNEEKREAKRNSLFDEGP
TCLHVPQKTPVKIEAVSDSEIAIVRTTNDKTFPSRLYTPYDVEDEYRGQGTMQETSTRIVRTIFDINNAPDAKLVLGEVV
NFPGKWSSYPPHHHPQPEIYHYRFLPEQGFGFAMLGDEVFKVRNGYTVKILNDLSHPQVSAPGYAMYYIWAIRHLDDNPY
ITPVFEPEHTWVMNKNAPIWTKRGE
>Mature_265_residues
MFLLKPDGIFQWGYTSITEEGEASGNTMMDFGILRLEAGKTYECSLPKERAFLLLSGNVIFFFNEEKREAKRNSLFDEGP
TCLHVPQKTPVKIEAVSDSEIAIVRTTNDKTFPSRLYTPYDVEDEYRGQGTMQETSTRIVRTIFDINNAPDAKLVLGEVV
NFPGKWSSYPPHHHPQPEIYHYRFLPEQGFGFAMLGDEVFKVRNGYTVKILNDLSHPQVSAPGYAMYYIWAIRHLDDNPY
ITPVFEPEHTWVMNKNAPIWTKRGE

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30468; Mature: 30468

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLKPDGIFQWGYTSITEEGEASGNTMMDFGILRLEAGKTYECSLPKERAFLLLSGNVI
CEEECCCCEEECCCCEECCCCCCCCCEEEEEEEEEEECCCEEEECCCCCEEEEEEECCEE
FFFNEEKREAKRNSLFDEGPTCLHVPQKTPVKIEAVSDSEIAIVRTTNDKTFPSRLYTPY
EEECCHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHCCCCC
DVEDEYRGQGTMQETSTRIVRTIFDINNAPDAKLVLGEVVNFPGKWSSYPPHHHPQPEIY
CCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEE
HYRFLPEQGFGFAMLGDEVFKVRNGYTVKILNDLSHPQVSAPGYAMYYIWAIRHLDDNPY
EEEECCCCCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCE
ITPVFEPEHTWVMNKNAPIWTKRGE
EEEEECCCCCEEEECCCCEEEECCC
>Mature Secondary Structure
MFLLKPDGIFQWGYTSITEEGEASGNTMMDFGILRLEAGKTYECSLPKERAFLLLSGNVI
CEEECCCCEEECCCCEECCCCCCCCCEEEEEEEEEEECCCEEEECCCCCEEEEEEECCEE
FFFNEEKREAKRNSLFDEGPTCLHVPQKTPVKIEAVSDSEIAIVRTTNDKTFPSRLYTPY
EEECCHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCEEEEEECCCCCCHHHCCCCC
DVEDEYRGQGTMQETSTRIVRTIFDINNAPDAKLVLGEVVNFPGKWSSYPPHHHPQPEIY
CCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEE
HYRFLPEQGFGFAMLGDEVFKVRNGYTVKILNDLSHPQVSAPGYAMYYIWAIRHLDDNPY
EEEECCCCCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCE
ITPVFEPEHTWVMNKNAPIWTKRGE
EEEEECCCCCEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA