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The map label for this gene is frlC [C]

Identifier: 239617326

GI number: 239617326

Start: 989396

End: 990178

Strand: Reverse

Name: frlC [C]

Synonym: Kole_0935

Alternate gene names: 239617326

Gene position: 990178-989396 (Counterclockwise)

Preceding gene: 239617327

Following gene: 239617325

Centisome position: 43.01

GC content: 41.76

Gene sequence:

>783_bases
ATGAAAATGAACCTGTCCTTTTCGACTGCAGCCTTGTTTCCGAGAAACAGTCTTGATTCTTTAAAAATTGTAGAAGAAGC
GGGATTTCAGTATGCAGAATTAATGCCTCAGTGTATGGAGGAAACAAAACCTTGCTTTGCGAAAGAAATAACGAGCAGAG
TGAAGATAAAAGTTGCCTCCATACACTTCCCACTTGTCTTTTTCTCGATGTTTTACAACCCTTATCCCGGAATGGTGAGG
GAAGCAAAAACTCTGATAGACAATATCACCACACTTGCGGAAACCCTCGGAACGGAAGTCATTGTCATTCATCCGCCCTA
TTTTGGTAATGAAACCACGGAAAGATTATTTTACACCCCTATAATGGATAATATGAGATATCTATGCGAAAAGTCCAAGG
AAAACGGTGTAAAAATTGCTCTTGAAAACTCACCAAAGGGCGGGCGTACACCTGAAGAGATGCTGCAGGTAATTCGTGCT
GTGAACCATGAGAATATTTTTCCAATGCTTGATACAACAGAAGCGGTTGAGTCCGATCAAGATCCAGTGGAGATGCTGAA
AAAACTGGATGTGATACACATTCATGCAAGTGATCATAAAGGTGAAGCCAAACATATTCTGCCGAACGAAGGAGATCTCG
ATTGGGTGAAAATCGTTTCTATTTTGCAGGAAAAGGGATTTTCCGGGTTCTTCACCGTAGAACCATCCTACAGATACTTC
CTTGAAGAACCGGAGGAGAAGATGAAGGCCGTGTTGAAGTTTTTAACGAATTTGCAGGGGTGA

Upstream 100 bases:

>100_bases
TATTATACGAATACCTCGACAAGATCGAGAGGGGTATATTAACACCAGAAGAGGCAATGAAAGAAGCAGCAGAAAAGCTT
AAGAAGGAGATAGAAAACGA

Downstream 100 bases:

>100_bases
CATGCTTGAGAGCTGGAGTGATAGTAAACACATCGGCTGGTAAATTCGAATATATAAGAAAAAGGATATCGAAGCTAAAA
GAAGTATTCGATGAGATAGT

Product: Xylose isomerase domain protein TIM barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKMNLSFSTAALFPRNSLDSLKIVEEAGFQYAELMPQCMEETKPCFAKEITSRVKIKVASIHFPLVFFSMFYNPYPGMVR
EAKTLIDNITTLAETLGTEVIVIHPPYFGNETTERLFYTPIMDNMRYLCEKSKENGVKIALENSPKGGRTPEEMLQVIRA
VNHENIFPMLDTTEAVESDQDPVEMLKKLDVIHIHASDHKGEAKHILPNEGDLDWVKIVSILQEKGFSGFFTVEPSYRYF
LEEPEEKMKAVLKFLTNLQG

Sequences:

>Translated_260_residues
MKMNLSFSTAALFPRNSLDSLKIVEEAGFQYAELMPQCMEETKPCFAKEITSRVKIKVASIHFPLVFFSMFYNPYPGMVR
EAKTLIDNITTLAETLGTEVIVIHPPYFGNETTERLFYTPIMDNMRYLCEKSKENGVKIALENSPKGGRTPEEMLQVIRA
VNHENIFPMLDTTEAVESDQDPVEMLKKLDVIHIHASDHKGEAKHILPNEGDLDWVKIVSILQEKGFSGFFTVEPSYRYF
LEEPEEKMKAVLKFLTNLQG
>Mature_260_residues
MKMNLSFSTAALFPRNSLDSLKIVEEAGFQYAELMPQCMEETKPCFAKEITSRVKIKVASIHFPLVFFSMFYNPYPGMVR
EAKTLIDNITTLAETLGTEVIVIHPPYFGNETTERLFYTPIMDNMRYLCEKSKENGVKIALENSPKGGRTPEEMLQVIRA
VNHENIFPMLDTTEAVESDQDPVEMLKKLDVIHIHASDHKGEAKHILPNEGDLDWVKIVSILQEKGFSGFFTVEPSYRYF
LEEPEEKMKAVLKFLTNLQG

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 29708; Mature: 29708

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNLSFSTAALFPRNSLDSLKIVEEAGFQYAELMPQCMEETKPCFAKEITSRVKIKVAS
CEECCCCCHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEE
IHFPLVFFSMFYNPYPGMVREAKTLIDNITTLAETLGTEVIVIHPPYFGNETTERLFYTP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHEEECH
IMDNMRYLCEKSKENGVKIALENSPKGGRTPEEMLQVIRAVNHENIFPMLDTTEAVESDQ
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
DPVEMLKKLDVIHIHASDHKGEAKHILPNEGDLDWVKIVSILQEKGFSGFFTVEPSYRYF
CHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHH
LEEPEEKMKAVLKFLTNLQG
HCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMNLSFSTAALFPRNSLDSLKIVEEAGFQYAELMPQCMEETKPCFAKEITSRVKIKVAS
CEECCCCCHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEE
IHFPLVFFSMFYNPYPGMVREAKTLIDNITTLAETLGTEVIVIHPPYFGNETTERLFYTP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHEEECH
IMDNMRYLCEKSKENGVKIALENSPKGGRTPEEMLQVIRAVNHENIFPMLDTTEAVESDQ
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
DPVEMLKKLDVIHIHASDHKGEAKHILPNEGDLDWVKIVSILQEKGFSGFFTVEPSYRYF
CHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHH
LEEPEEKMKAVLKFLTNLQG
HCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]