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The map label for this gene is rbgA [H]

Identifier: 239617320

GI number: 239617320

Start: 983390

End: 984232

Strand: Reverse

Name: rbgA [H]

Synonym: Kole_0929

Alternate gene names: 239617320

Gene position: 984232-983390 (Counterclockwise)

Preceding gene: 239617321

Following gene: 239617319

Centisome position: 42.75

GC content: 40.81

Gene sequence:

>843_bases
TTGTGGTACCCGGGTCATATTGAAAAAGCGAAGAAAAACATTCAGAAACATCTGAAGATTGTCGATGCAATTGTTGAATT
GGTAGATGCACGCATTCCATATACAAGTAGAGCATATGAATATGAAAAGCTCTTTGGGAATAAACAAAGAATCCTCGTGC
TCAATAAAGAAGACCTCGCCGACCCGGCCATCACCTCCAGATGGCAGAAATACTTTTTAAAAGGTAACGTCCCTATTCTT
AAAATCAATCTAAAAAGTGCGGATGCTAGAAGATTCCTTACAAAAAAGGTCTTTCCTCTCATAAAAAGTCGATACGCTGA
AAAAAGAATCATGATAGTTGGAATACCAAACGTTGGAAAGTCAACATTCATAAACCGATTAAAGGGAAAGAAGTCTCTCG
TTGTTGGAAATACCCCCGGTGTTACCCGGGGAGTTCAATGGATTACCGTCAGTAAGCAACTTATGGTTTTAGATACCCCG
GGTATTCTGTACACGCGGCTCCATAGTCCTTCGATAATTACTAAACTCGCCGCAGTCGGTTCCCTTCCGCTGGAAAAACT
TGATATTCTGGAAGCTTTCAGGGATGTTTTCACGTTACTTACTGAACGTTATGGAACGGCAGTATTATCCGGTCTTATTG
ACATAAATACCGATGATCCATTCGAGTTTCTTGAAAATTTCACAGAAAAGAGAAGGTTCCTCCAATCCAGAGGAGAATTG
AATCTCGAACGTGGTGCGTTTGCTTTCCTCAGGGAACTTGCTAATGGCAAGTTTGGCCGTTTCTCTTATGAAACCCCTGA
AGAAATTGAGCAACTTGTGTCTCAGAAGAAAGAAAAGCAATAA

Upstream 100 bases:

>100_bases
TCGATAAAATTCGTTTTCCACTTCATCCTGGTATTTGTGGTATATTCTGTTTGCATGTACAGATAAAACCACTGTATAAT
CCGTCAGGGGGTATAATGCT

Downstream 100 bases:

>100_bases
CAAGTAACCGAAATATTTTTGGAACGTCTGTACGAAATCACCCTGGAAATCTGGTTAGAGGAAAGGAAAAATGAAAAAAA
TGGGAGAGAAGAAATCTCGT

Product: GTP-binding protein HSR1-related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MWYPGHIEKAKKNIQKHLKIVDAIVELVDARIPYTSRAYEYEKLFGNKQRILVLNKEDLADPAITSRWQKYFLKGNVPIL
KINLKSADARRFLTKKVFPLIKSRYAEKRIMIVGIPNVGKSTFINRLKGKKSLVVGNTPGVTRGVQWITVSKQLMVLDTP
GILYTRLHSPSIITKLAAVGSLPLEKLDILEAFRDVFTLLTERYGTAVLSGLIDINTDDPFEFLENFTEKRRFLQSRGEL
NLERGAFAFLRELANGKFGRFSYETPEEIEQLVSQKKEKQ

Sequences:

>Translated_280_residues
MWYPGHIEKAKKNIQKHLKIVDAIVELVDARIPYTSRAYEYEKLFGNKQRILVLNKEDLADPAITSRWQKYFLKGNVPIL
KINLKSADARRFLTKKVFPLIKSRYAEKRIMIVGIPNVGKSTFINRLKGKKSLVVGNTPGVTRGVQWITVSKQLMVLDTP
GILYTRLHSPSIITKLAAVGSLPLEKLDILEAFRDVFTLLTERYGTAVLSGLIDINTDDPFEFLENFTEKRRFLQSRGEL
NLERGAFAFLRELANGKFGRFSYETPEEIEQLVSQKKEKQ
>Mature_280_residues
MWYPGHIEKAKKNIQKHLKIVDAIVELVDARIPYTSRAYEYEKLFGNKQRILVLNKEDLADPAITSRWQKYFLKGNVPIL
KINLKSADARRFLTKKVFPLIKSRYAEKRIMIVGIPNVGKSTFINRLKGKKSLVVGNTPGVTRGVQWITVSKQLMVLDTP
GILYTRLHSPSIITKLAAVGSLPLEKLDILEAFRDVFTLLTERYGTAVLSGLIDINTDDPFEFLENFTEKRRFLQSRGEL
NLERGAFAFLRELANGKFGRFSYETPEEIEQLVSQKKEKQ

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=200, Percent_Identity=37, Blast_Score=111, Evalue=6e-25,
Organism=Homo sapiens, GI296317324, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI9506611, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI7019419, Length=265, Percent_Identity=28.6792452830189, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25143545, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI115535155, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17534827, Length=176, Percent_Identity=31.25, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71982363, Length=173, Percent_Identity=31.2138728323699, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193211047, Length=186, Percent_Identity=32.7956989247312, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320842, Length=297, Percent_Identity=28.6195286195286, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6324381, Length=150, Percent_Identity=30, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85815858, Length=304, Percent_Identity=30.2631578947368, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI28572990, Length=294, Percent_Identity=27.2108843537415, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI19922460, Length=157, Percent_Identity=31.8471337579618, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32103; Mature: 32103

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYPGHIEKAKKNIQKHLKIVDAIVELVDARIPYTSRAYEYEKLFGNKQRILVLNKEDLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHCC
DPAITSRWQKYFLKGNVPILKINLKSADARRFLTKKVFPLIKSRYAEKRIMIVGIPNVGK
CHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
STFINRLKGKKSLVVGNTPGVTRGVQWITVSKQLMVLDTPGILYTRLHSPSIITKLAAVG
HHHHHHHCCCCEEEECCCCCCHHCEEEEEECCEEEEEECCCEEEEEECCCHHHHHHHHHC
SLPLEKLDILEAFRDVFTLLTERYGTAVLSGLIDINTDDPFEFLENFTEKRRFLQSRGEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
NLERGAFAFLRELANGKFGRFSYETPEEIEQLVSQKKEKQ
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWYPGHIEKAKKNIQKHLKIVDAIVELVDARIPYTSRAYEYEKLFGNKQRILVLNKEDLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCHHCC
DPAITSRWQKYFLKGNVPILKINLKSADARRFLTKKVFPLIKSRYAEKRIMIVGIPNVGK
CHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
STFINRLKGKKSLVVGNTPGVTRGVQWITVSKQLMVLDTPGILYTRLHSPSIITKLAAVG
HHHHHHHCCCCEEEECCCCCCHHCEEEEEECCEEEEEECCCEEEEEECCCHHHHHHHHHC
SLPLEKLDILEAFRDVFTLLTERYGTAVLSGLIDINTDDPFEFLENFTEKRRFLQSRGEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
NLERGAFAFLRELANGKFGRFSYETPEEIEQLVSQKKEKQ
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]