| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is yitW [H]
Identifier: 239617252
GI number: 239617252
Start: 907376
End: 907681
Strand: Direct
Name: yitW [H]
Synonym: Kole_0860
Alternate gene names: 239617252
Gene position: 907376-907681 (Clockwise)
Preceding gene: 239617251
Following gene: 239617253
Centisome position: 39.41
GC content: 42.48
Gene sequence:
>306_bases ATGGCGGCTGTGACAAAAGAACAGGTGATGGAAGCTCTCAAAGAGGTTTACGACATGGAAATCGGCTTTGATATTGTTAG CCTTGGGCTTGTATATGGTGTTGAGATAGACAACGAAAACAACGTTAAGGTAACCATGACGCTGACCACACCAATGTGCC CTCTTGCAGGCTTTATCATCGAGGATGCCAGAAGTAAGGTTCAACAGATAGAAGGTGTCAACAAAGTTGATGTTGAACTG ACTTTCGATCCACCATGGACACCCGAAAAAGCTTCTGACGAAGTAAAAAAAATCTTTGGAATATAA
Upstream 100 bases:
>100_bases AGAGAAAAAGAAGAACATATGGAATACCTTTATCGAACAGTATTTTGTTCCTTTCAGGGAACAGGCAATAATCGAAGTTG GCGAAATAGGAGGATAGAAC
Downstream 100 bases:
>100_bases GAATGAAACTCAAAGAGTTGTTTGAAGGAATCACGTTCGAACTCAAAGAAGCGGGGATTGAAAATCCTCGCTTCGTTACT TTTACTTTACTTGAAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MAAVTKEQVMEALKEVYDMEIGFDIVSLGLVYGVEIDNENNVKVTMTLTTPMCPLAGFIIEDARSKVQQIEGVNKVDVEL TFDPPWTPEKASDEVKKIFGI
Sequences:
>Translated_101_residues MAAVTKEQVMEALKEVYDMEIGFDIVSLGLVYGVEIDNENNVKVTMTLTTPMCPLAGFIIEDARSKVQQIEGVNKVDVEL TFDPPWTPEKASDEVKKIFGI >Mature_100_residues AAVTKEQVMEALKEVYDMEIGFDIVSLGLVYGVEIDNENNVKVTMTLTTPMCPLAGFIIEDARSKVQQIEGVNKVDVELT FDPPWTPEKASDEVKKIFGI
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 11223; Mature: 11092
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVTKEQVMEALKEVYDMEIGFDIVSLGLVYGVEIDNENNVKVTMTLTTPMCPLAGFII CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHH EDARSKVQQIEGVNKVDVELTFDPPWTPEKASDEVKKIFGI HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AAVTKEQVMEALKEVYDMEIGFDIVSLGLVYGVEIDNENNVKVTMTLTTPMCPLAGFII CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHH EDARSKVQQIEGVNKVDVELTFDPPWTPEKASDEVKKIFGI HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]