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The map label for this gene is ydfM [H]

Identifier: 239617236

GI number: 239617236

Start: 891493

End: 892440

Strand: Direct

Name: ydfM [H]

Synonym: Kole_0844

Alternate gene names: 239617236

Gene position: 891493-892440 (Clockwise)

Preceding gene: 239617235

Following gene: 239617237

Centisome position: 38.72

GC content: 39.66

Gene sequence:

>948_bases
ATGGAGTACAATAACAGGGATAAAATCGCGAATAAAGGATCTATCGTCGGAGTCGTAGGAAATCTCATTCTTTCTGTCGG
AAAGATTGTTACCGGCTTATTTACGGGAAGTATGGCTATCCTCGCTGATGGTCTTGATTCTGCCATCGATGTGATGACAT
CCATGGTTACCCTCGCATCAACTAGAATCGCAAGCAAACCCCCAGATAGAGAACACCCTTACGGCCACGAAAGAGCTGAA
GCGATAGCAGCGAAGATTATTGCTATGATTGTTCTCTTTGCTGGTGGTGAACTTGCCATTACTTCGATTAAAAAGTTGTT
TTTAGAAGCACCTGTAATAAATAACCTTGGCCTCGTTTTAGGAGTCGCATTGATGTCGGCTCTGGGAAAATATTTTCTTT
ACAGATACAAACTCAATATTGGAAAGAAGATAAACAGCAGCGTTTTCATCGCTGATGCGGTAAATATGAGAAGTGATATA
CTTATATCCCTTTCTGTTTTTGGTGGAATATTTCTTATTATGTTGACAGGGTTAACTATCCTGGACACAATAGTGGGATT
GATTGTTTCCGCCTTTGTTATAAAAAGCGCTGTGGAAATATTCTTACAGAGCAGTACAGAACTGATGGATGGGATTCCTG
GCAACGACAATATTTACAAAAGAGTCTTCGAAGCGGTAAATACAGTTGAAGGCGCTTCAAATCCACACAAAGTTAGAATC
AGGAAAATGGGGCATAAATATCTCGTAGATATGGATATTGAGGTTGATGGAAACCTTACCGTACAAAAAGCCCACGAAAT
CGCAAAAGAGATAGAAGAAGCTATAATGAACAATGAGAAGAGCGTTTATGATGTACATGTTCATATCGAACCTCTTGGGA
ACATCGAATCTGAAAATTTCGGTATATCCGTTGAAACAACCAGAAAAGACCGACATACTAAAGGATAA

Upstream 100 bases:

>100_bases
CCCGTAAAAAAAGGAATAGGGGGGCAAGTTTCTATAATTTTGACTTGTGAAAGTTCAAAAGAGTTCATCTATTTCAAAAG
TTTGTGGAGGAAACAATTAT

Downstream 100 bases:

>100_bases
AGCCTTTTTATGGAGGGTGTTGCAAATGCCGGATACAATAGGTAAAAATACCCGTGATTTCATTCAGCAATTTCATCAAC
TATTTATTGAACTTTGCGAA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MEYNNRDKIANKGSIVGVVGNLILSVGKIVTGLFTGSMAILADGLDSAIDVMTSMVTLASTRIASKPPDREHPYGHERAE
AIAAKIIAMIVLFAGGELAITSIKKLFLEAPVINNLGLVLGVALMSALGKYFLYRYKLNIGKKINSSVFIADAVNMRSDI
LISLSVFGGIFLIMLTGLTILDTIVGLIVSAFVIKSAVEIFLQSSTELMDGIPGNDNIYKRVFEAVNTVEGASNPHKVRI
RKMGHKYLVDMDIEVDGNLTVQKAHEIAKEIEEAIMNNEKSVYDVHVHIEPLGNIESENFGISVETTRKDRHTKG

Sequences:

>Translated_315_residues
MEYNNRDKIANKGSIVGVVGNLILSVGKIVTGLFTGSMAILADGLDSAIDVMTSMVTLASTRIASKPPDREHPYGHERAE
AIAAKIIAMIVLFAGGELAITSIKKLFLEAPVINNLGLVLGVALMSALGKYFLYRYKLNIGKKINSSVFIADAVNMRSDI
LISLSVFGGIFLIMLTGLTILDTIVGLIVSAFVIKSAVEIFLQSSTELMDGIPGNDNIYKRVFEAVNTVEGASNPHKVRI
RKMGHKYLVDMDIEVDGNLTVQKAHEIAKEIEEAIMNNEKSVYDVHVHIEPLGNIESENFGISVETTRKDRHTKG
>Mature_315_residues
MEYNNRDKIANKGSIVGVVGNLILSVGKIVTGLFTGSMAILADGLDSAIDVMTSMVTLASTRIASKPPDREHPYGHERAE
AIAAKIIAMIVLFAGGELAITSIKKLFLEAPVINNLGLVLGVALMSALGKYFLYRYKLNIGKKINSSVFIADAVNMRSDI
LISLSVFGGIFLIMLTGLTILDTIVGLIVSAFVIKSAVEIFLQSSTELMDGIPGNDNIYKRVFEAVNTVEGASNPHKVRI
RKMGHKYLVDMDIEVDGNLTVQKAHEIAKEIEEAIMNNEKSVYDVHVHIEPLGNIESENFGISVETTRKDRHTKG

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=275, Percent_Identity=24.7272727272727, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193210990, Length=318, Percent_Identity=23.5849056603774, Blast_Score=81, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6325032, Length=232, Percent_Identity=28.0172413793103, Blast_Score=83, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323831, Length=221, Percent_Identity=28.5067873303167, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 34245; Mature: 34245

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNNRDKIANKGSIVGVVGNLILSVGKIVTGLFTGSMAILADGLDSAIDVMTSMVTLAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
TRIASKPPDREHPYGHERAEAIAAKIIAMIVLFAGGELAITSIKKLFLEAPVINNLGLVL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
GVALMSALGKYFLYRYKLNIGKKINSSVFIADAVNMRSDILISLSVFGGIFLIMLTGLTI
HHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHCCCHHHEEHHHHHHHHHHHHHHHHHH
LDTIVGLIVSAFVIKSAVEIFLQSSTELMDGIPGNDNIYKRVFEAVNTVEGASNPHKVRI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHH
RKMGHKYLVDMDIEVDGNLTVQKAHEIAKEIEEAIMNNEKSVYDVHVHIEPLGNIESENF
EECCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
GISVETTRKDRHTKG
CEEEEECCCCCCCCC
>Mature Secondary Structure
MEYNNRDKIANKGSIVGVVGNLILSVGKIVTGLFTGSMAILADGLDSAIDVMTSMVTLAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
TRIASKPPDREHPYGHERAEAIAAKIIAMIVLFAGGELAITSIKKLFLEAPVINNLGLVL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
GVALMSALGKYFLYRYKLNIGKKINSSVFIADAVNMRSDILISLSVFGGIFLIMLTGLTI
HHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHCCCHHHEEHHHHHHHHHHHHHHHHHH
LDTIVGLIVSAFVIKSAVEIFLQSSTELMDGIPGNDNIYKRVFEAVNTVEGASNPHKVRI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHH
RKMGHKYLVDMDIEVDGNLTVQKAHEIAKEIEEAIMNNEKSVYDVHVHIEPLGNIESENF
EECCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
GISVETTRKDRHTKG
CEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]