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The map label for this gene is ycjP [H]

Identifier: 239617206

GI number: 239617206

Start: 864359

End: 865330

Strand: Direct

Name: ycjP [H]

Synonym: Kole_0813

Alternate gene names: 239617206

Gene position: 864359-865330 (Clockwise)

Preceding gene: 239617205

Following gene: 239617207

Centisome position: 37.55

GC content: 41.36

Gene sequence:

>972_bases
ATGGTAAAGGCGAAAAATATACCCAAAAAAATTGGTTTCTATATACTGGTTATCCTGGTGGTTCTTTTTGTTGCCTATCC
GTTCGCCTGGATGATTTCCGTATCTTTAAGGTACGACACCGATGCCTTTGAACCTGGTATAATCCCAAAGAGGCCTACTC
TCAGACAATACGGTGAACTTCTTGGTTTTGTCAAATCCATAAGAGAAGAGCTCTCCCGTGAGGAAGAACAACTGACAGAA
CTCATAAAAGATCTCCCCCCGGAATTGCAAAAACAGGTTGCTGCTGAGATTAAAGCCCAGAGGAAACAGGAATCCTTTCC
ATTTCTCAGATTTTTCCGGAACAGTTTAACAGTTGCTGGGATCTCCGCTTTCATAAGTCTTGTCGTTTCCGTTTTTGGCG
CGTATTCTTTCAGTCGTCTCGAGTACGTCGGAAGAGGTGTCTTACAACGTGGCGTTCTTGTAGTTTATCTGTTCGGTGGA
ACTATACTCGCGGTACCGTTGTACCAGATATTTGTGAAACTAGGATTTGTTGGCTCTGGTTTAAAATCTTTCCTTGCGCT
TTTCATAATATACATCGTACAAACGTTACCCGTGTCGCTCTACATGCTGGGAAATTACTTTAGAACAATACCTTACTCCA
TAGAGGAAGCAGCGATAATAGATGGCTGTACCAGAATCCAGGCGATATTCAAAATAGTTGTTCCGTTATCATTACCTGCT
ATTGTAACTGTCTATATTTATGCCTTCATGATAGCGTGGAACGAATTCCTTTTTGCTTCTATTTTTGTAAGGCCGTACCC
AACATACTATACTCTTCCTATCGGTTTGAATGAACTCTTCTACTCTGAACATGCTATCTGGGGAAAGATGATGACGGCTT
CTGTACTAACGGCTCTTCCTGTTGTCGTTATGTTCACAATAATGGAAAAATACCTAACAAGCGGTTTAACCGTTGGTGGA
GTTAAAGAATAA

Upstream 100 bases:

>100_bases
TTGTTGGTGTTCCGGAACAGGGTGTTGCTGCTGCGATTGCAACGATCTTGTTCGTTGTAATGTTCATCCTGATCGGAATA
TACGTAAAGAGGGTGTTGAA

Downstream 100 bases:

>100_bases
TGGAGGTGGTCGTAATGTTTGCGGTGCCTGACGAAATTATTGAAACACTGGAGTACTTTGGAAAGATTAAAGTGGTTGTT
GGAATCCCGAGTTATAATAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVKAKNIPKKIGFYILVILVVLFVAYPFAWMISVSLRYDTDAFEPGIIPKRPTLRQYGELLGFVKSIREELSREEEQLTE
LIKDLPPELQKQVAAEIKAQRKQESFPFLRFFRNSLTVAGISAFISLVVSVFGAYSFSRLEYVGRGVLQRGVLVVYLFGG
TILAVPLYQIFVKLGFVGSGLKSFLALFIIYIVQTLPVSLYMLGNYFRTIPYSIEEAAIIDGCTRIQAIFKIVVPLSLPA
IVTVYIYAFMIAWNEFLFASIFVRPYPTYYTLPIGLNELFYSEHAIWGKMMTASVLTALPVVVMFTIMEKYLTSGLTVGG
VKE

Sequences:

>Translated_323_residues
MVKAKNIPKKIGFYILVILVVLFVAYPFAWMISVSLRYDTDAFEPGIIPKRPTLRQYGELLGFVKSIREELSREEEQLTE
LIKDLPPELQKQVAAEIKAQRKQESFPFLRFFRNSLTVAGISAFISLVVSVFGAYSFSRLEYVGRGVLQRGVLVVYLFGG
TILAVPLYQIFVKLGFVGSGLKSFLALFIIYIVQTLPVSLYMLGNYFRTIPYSIEEAAIIDGCTRIQAIFKIVVPLSLPA
IVTVYIYAFMIAWNEFLFASIFVRPYPTYYTLPIGLNELFYSEHAIWGKMMTASVLTALPVVVMFTIMEKYLTSGLTVGG
VKE
>Mature_323_residues
MVKAKNIPKKIGFYILVILVVLFVAYPFAWMISVSLRYDTDAFEPGIIPKRPTLRQYGELLGFVKSIREELSREEEQLTE
LIKDLPPELQKQVAAEIKAQRKQESFPFLRFFRNSLTVAGISAFISLVVSVFGAYSFSRLEYVGRGVLQRGVLVVYLFGG
TILAVPLYQIFVKLGFVGSGLKSFLALFIIYIVQTLPVSLYMLGNYFRTIPYSIEEAAIIDGCTRIQAIFKIVVPLSLPA
IVTVYIYAFMIAWNEFLFASIFVRPYPTYYTLPIGLNELFYSEHAIWGKMMTASVLTALPVVVMFTIMEKYLTSGLTVGG
VKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=324, Percent_Identity=37.037037037037, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1790464, Length=330, Percent_Identity=30.3030303030303, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36501; Mature: 36501

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]