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The map label for this gene is ycjN [H]

Identifier: 239617204

GI number: 239617204

Start: 862120

End: 863406

Strand: Direct

Name: ycjN [H]

Synonym: Kole_0811

Alternate gene names: 239617204

Gene position: 862120-863406 (Clockwise)

Preceding gene: 239617194

Following gene: 239617205

Centisome position: 37.45

GC content: 43.59

Gene sequence:

>1287_bases
ATGAGAAAAGTGCTTGTTCTTTTGCTCGTGTTAGTTTTGTTTGCTTCACTTGCAACTGCCAAGATTATCTTCTGGACTAC
TGAAGTCGAATCAAACAGGATGCAGAGAATAAGAGCACTCGCGACATTGTTTAGAGCGAAAACTGGAATAGTTGTAGAGG
TTGTGCCGGTTGAAGAAAATGACCTGCTGAGGCAAATTCCAATTGCCAAAGCTTCAGGAACACTTCCGGATGTTGTCGAA
GGTGGAATTGAACCAATGCTTCTTCTCGGAAGTGAGGGGCTCTTAAATGAAGATCTCGCCGCTGAAATCATTAATGAATT
TGGTGATATCTACACAGGCGCCTCCAGGCTCCTTTCCAATGGTAAAGGAGGCTACTTTGCGATTCCTTTCCACGCCTGGG
TCCAGGGTATCTGGTACAGGAAAGACATGTTCGCAGAGAAAAAACTGACACCTCCTATTTCCTGGTACGATATTCTAACA
GCAGCAAGGGAAATCCATGATCCTGAAAATGGTGTTTACGGTATAATATTGCCGAAAAAAGCGGATGCTTACGCAGAACA
GGTATTCACCGAAATAGCCCTTGCGAACGGTGCAAGACCAATCGACCTTGAAGGAAATATAAAATTCAACACCCCAGAAA
TGATTGAAGCTTTCAGGTTCTACAAGGAACTTGGAAAATATTCAAAACCCGGATTCACAACCGTCTTGGATGCTTTAAAA
GGTTATCTCGCTGGTGAAACGGGAATGATTTTCTATTCAACCTACATAATGGATGATATCGCTGTTGAAGAGGTCCAGAG
AGGTAGAATCGATAAGTTTGACCCGAAGCTTGTTGTCAATACCGGTTTTGCCAATTACATGATAAATATCAAGCCAAGCT
CTTATGGGCAGGTAGTCGCACTTGGAATACTGAAAACATCGAAAAACAGCGAAGAAGCCAAAGAATTTGTCAAATTCTTA
ATGGACGGATCTAACTACATCTACTGGCTCCACATGGCTCCCGGCGGAATGAACCCAACGAGAAAGTCGGTAGCCGCGGA
TCCTGCTTTCCTTAATAATCCGGTTCTTGAAAGGTACGGTAGCGAAAAGATTCAGGAGATCATCGCTGCTCTCGAGAACG
TGGAAAGGTTTGACTTCTATGAAGGCCATGTACTGATGGATATGAGTAAGATTTCTGGTAACTTCATCATTGGTAAGGCG
ATCAACCTCATGTTTGCAAATGATTGGACTCCGGAAGAAGCGGCTAATTGGGCACAAGCTGAAGCCGAAAAGATTCTCGG
GAAATAA

Upstream 100 bases:

>100_bases
AAAATTACCAATCTATGGTAGACTTATGATGAAAATATTCTTCATACATATTACCCACATTTTAATCCGGCCTTTGGCCG
CAAAAGGGGAGGGTTTAAGT

Downstream 100 bases:

>100_bases
TTGAACGGCCCCATTTTTCCCGGTGGCCTCTGCAAGAGGTCACCGGGTTTTTATGGAGGTGTAAGACTTTGACTAACTCG
CGAATGGCAACAGTGGGGAC

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRKVLVLLLVLVLFASLATAKIIFWTTEVESNRMQRIRALATLFRAKTGIVVEVVPVEENDLLRQIPIAKASGTLPDVVE
GGIEPMLLLGSEGLLNEDLAAEIINEFGDIYTGASRLLSNGKGGYFAIPFHAWVQGIWYRKDMFAEKKLTPPISWYDILT
AAREIHDPENGVYGIILPKKADAYAEQVFTEIALANGARPIDLEGNIKFNTPEMIEAFRFYKELGKYSKPGFTTVLDALK
GYLAGETGMIFYSTYIMDDIAVEEVQRGRIDKFDPKLVVNTGFANYMINIKPSSYGQVVALGILKTSKNSEEAKEFVKFL
MDGSNYIYWLHMAPGGMNPTRKSVAADPAFLNNPVLERYGSEKIQEIIAALENVERFDFYEGHVLMDMSKISGNFIIGKA
INLMFANDWTPEEAANWAQAEAEKILGK

Sequences:

>Translated_428_residues
MRKVLVLLLVLVLFASLATAKIIFWTTEVESNRMQRIRALATLFRAKTGIVVEVVPVEENDLLRQIPIAKASGTLPDVVE
GGIEPMLLLGSEGLLNEDLAAEIINEFGDIYTGASRLLSNGKGGYFAIPFHAWVQGIWYRKDMFAEKKLTPPISWYDILT
AAREIHDPENGVYGIILPKKADAYAEQVFTEIALANGARPIDLEGNIKFNTPEMIEAFRFYKELGKYSKPGFTTVLDALK
GYLAGETGMIFYSTYIMDDIAVEEVQRGRIDKFDPKLVVNTGFANYMINIKPSSYGQVVALGILKTSKNSEEAKEFVKFL
MDGSNYIYWLHMAPGGMNPTRKSVAADPAFLNNPVLERYGSEKIQEIIAALENVERFDFYEGHVLMDMSKISGNFIIGKA
INLMFANDWTPEEAANWAQAEAEKILGK
>Mature_428_residues
MRKVLVLLLVLVLFASLATAKIIFWTTEVESNRMQRIRALATLFRAKTGIVVEVVPVEENDLLRQIPIAKASGTLPDVVE
GGIEPMLLLGSEGLLNEDLAAEIINEFGDIYTGASRLLSNGKGGYFAIPFHAWVQGIWYRKDMFAEKKLTPPISWYDILT
AAREIHDPENGVYGIILPKKADAYAEQVFTEIALANGARPIDLEGNIKFNTPEMIEAFRFYKELGKYSKPGFTTVLDALK
GYLAGETGMIFYSTYIMDDIAVEEVQRGRIDKFDPKLVVNTGFANYMINIKPSSYGQVVALGILKTSKNSEEAKEFVKFL
MDGSNYIYWLHMAPGGMNPTRKSVAADPAFLNNPVLERYGSEKIQEIIAALENVERFDFYEGHVLMDMSKISGNFIIGKA
INLMFANDWTPEEAANWAQAEAEKILGK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=416, Percent_Identity=29.3269230769231, Blast_Score=188, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47769; Mature: 47769

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLVLLLVLVLFASLATAKIIFWTTEVESNRMQRIRALATLFRAKTGIVVEVVPVEEN
CHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
DLLRQIPIAKASGTLPDVVEGGIEPMLLLGSEGLLNEDLAAEIINEFGDIYTGASRLLSN
CHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GKGGYFAIPFHAWVQGIWYRKDMFAEKKLTPPISWYDILTAAREIHDPENGVYGIILPKK
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
ADAYAEQVFTEIALANGARPIDLEGNIKFNTPEMIEAFRFYKELGKYSKPGFTTVLDALK
HHHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GYLAGETGMIFYSTYIMDDIAVEEVQRGRIDKFDPKLVVNTGFANYMINIKPSSYGQVVA
HHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCEEE
LGILKTSKNSEEAKEFVKFLMDGSNYIYWLHMAPGGMNPTRKSVAADPAFLNNPVLERYG
EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCHHHCCHHHHHCC
SEKIQEIIAALENVERFDFYEGHVLMDMSKISGNFIIGKAINLMFANDWTPEEAANWAQA
HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHH
EAEKILGK
HHHHHCCC
>Mature Secondary Structure
MRKVLVLLLVLVLFASLATAKIIFWTTEVESNRMQRIRALATLFRAKTGIVVEVVPVEEN
CHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
DLLRQIPIAKASGTLPDVVEGGIEPMLLLGSEGLLNEDLAAEIINEFGDIYTGASRLLSN
CHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GKGGYFAIPFHAWVQGIWYRKDMFAEKKLTPPISWYDILTAAREIHDPENGVYGIILPKK
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
ADAYAEQVFTEIALANGARPIDLEGNIKFNTPEMIEAFRFYKELGKYSKPGFTTVLDALK
HHHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GYLAGETGMIFYSTYIMDDIAVEEVQRGRIDKFDPKLVVNTGFANYMINIKPSSYGQVVA
HHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCEEE
LGILKTSKNSEEAKEFVKFLMDGSNYIYWLHMAPGGMNPTRKSVAADPAFLNNPVLERYG
EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCHHHCCHHHHHCC
SEKIQEIIAALENVERFDFYEGHVLMDMSKISGNFIIGKAINLMFANDWTPEEAANWAQA
HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHH
EAEKILGK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]