| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616888
Identifier: 239616888
GI number: 239616888
Start: 520393
End: 522639
Strand: Direct
Name: 239616888
Synonym: Kole_0483
Alternate gene names: NA
Gene position: 520393-522639 (Clockwise)
Preceding gene: 239616887
Following gene: 239616889
Centisome position: 22.6
GC content: 41.34
Gene sequence:
>2247_bases ATGAAGAGTTTTTTTGTATCTTTAATGCTTGTGTTTTCAATCATTTCACCAGCCTCAGTTCTGGATTATGTCGATCCCTT CATAGGGACCGGGGGGCACGGTCACACATTTCCTGGGGCAACCGTTCCCTTTGGTATGGTTCAACTTAGCCCGGATACTG ATATCAAAGGTTGGGATTGGTGTTCAGGTTATCATTATTCTGATTCCTCCATAATGGGCTTCAGCCACACACACCTCAGT GGAACAGGCGCAGCAGATTATGGTGAAATCAGAATAATGCCAATCGTTGGAAATTTGAAAACACTCCCGGGACCAAAAGA CGATCCTGACGGAGGCTACCGATCCAGGTTCAGGCACGAAACAGAGATCGCAAAACCCGGATATTATTCAGTGTTTCTAG ATGATTACGGGATACTCGCAGAACTAACCGCATCCACAAGAGTTGGAGTTCATAGATACACATTTCCGAAAACTGATGAA GCTTACATAATACTGGATCTCTACCACAGAATCGGTGACATGGCAGAGAAGGCATGGGTGAAAATAGTTGGAAACGATGA GATAGAAGGATACATAACCGGAGGACATTTCTGTGGTGCACGCTCTCCCCACACTATTTATTTCGTCGCTAAATTTTCGA AACCTTTCGAGGAATTTGGGACGTGGAAAGTTTTCAGGATAGAACCAGGCAATAGGAAAGAAAAGCTACGGAGTCGTTCA GACCCCTTCGTAGGAGCTTACGTTAGGTACTCGACTGAAGAAAACGAAAAAATAATCATAAAGGTAGCCGTGTCTTATAC CGGTATAGAAGGTGCAAGAAAAAATCTTTCTGAGGTTCCGGATTGGGATTTTGATCGCGTCAAAAAAGAAGCCTTTGCCG CATGGGTAAAAGAACTCAATAAGATAGAAGTAGAAGGGAAAATTGGAGACAAAATAAAGTTCTACACAGCACTTTATCAT TCGTTCATCGCACCAAATATTTTTTCCGATATAGATGGAAAGTACATAGGTCCAGATGATAAAGTCCATTCCGCTGATTA TCCCCATTACACTGTTTTTTCTCTCTGGGATACCTTCAGAGCTCTTCATCCTTTATTCGTTCTTCTCCAACCTGAGAGAA ATGTGGACATGATAAAAAGTTTGCTTGACATATACGATCAATCTGGCTGGCTTCCAAAATGGTACAAAGCGAACAGATTT ACGAACTGCATGATAGGAACCCATGCAGACTCAGTTATAGCGGATGCCTACGTAAAAGGATTGGAAGGATTTGACCTCCA GAAAGCTTATAAAGCAATGCTAAAAAACGCTACCAAAACCTCAAGATGTTTTTATGAAGCCAGAGGAGGCTTGAAATACT ACATAAAGAAAGGATATGTCCCTGCAGACAGGGTTGGTGAGGCAACCTCCAGAACCCTGGAATTTGCATACGATGATTTT TGTATAGCTCAATTTGCCAAAAAGCTCGGAAAACTCAAAGACTATGAAAAATTCATGGAAAGATCAAAAAACTACAAAAA CGTTTTTGACCGTGAAACAGGGTTTATGAGAGGAAGAAAATACAACGGTCGCTGGATGGATGAAAATAACTTTGACCCAG CAAAAGTTTATAAATACTTCACAGAAGGAAATTCATGGCAATGGACTTTCTTCGTTGTTTCAGATATGTACGGCTTAATA GGCTTAATGGGAGGCAAAGAGGCCTTTTCCAAAAAGTTAGACAGATTCTTTTCGGAAGACAGCAATGTGGATGGACCACC TGATATAACGGGTCTTATAGGTCAGTACGCCCACGGGAACGAACCTTCACATCATGCTGCATACCTTTACGTTTATGCAA ACGAACCGTGGAAAACCCAAAAGATGGTCAGATATATAATGGATAACCTCTACCAAACAGGACCTGAAGGATTGTGCGGT AACGATGACTGTGGTCAAATGTCTGCCTGGTATGTTTTTAGTGCGATGGGATTTTATCCAGTTTGCCCTGGAACACCGTA TTACGTCATAGGTAGCCCCATTTTTAACAAAGTGGTGGTACACTTGAATAATAAAAGGGATTTCGAAATAGTTGCTAAAA ACAACTCTAAAGATAACCTTTACATATCGCGGGCCATACTTAACGATAAAGAGATAAAGAGAGCCTGGATAAATCACGAG GAAATCATCAAAGGTACGAAACTCGTATTTGAAATGTCTGCAAAACCAGATTTTTCCTGGGGACTAGAAAATGTACCCAT GGAATAA
Upstream 100 bases:
>100_bases GAAGCGAAGTCTGGAGAGATAATTCAGGCAGATGATACCAATACCGAAACAACCAGCATTGTGACAATCGCTCTTCTTGA ATAAGAGGTGAAGTGAAAAT
Downstream 100 bases:
>100_bases TGGAGGGATACTTAAATTGACACCGAAAGCTCCTTATAAACTAATCATCGACTTTCTTAGAGAAGAACTGAAAACAAAAT ACTCTCCCGGTGACAAGATC
Product: alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Glycosyltransferase; Lipoprotein
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MKSFFVSLMLVFSIISPASVLDYVDPFIGTGGHGHTFPGATVPFGMVQLSPDTDIKGWDWCSGYHYSDSSIMGFSHTHLS GTGAADYGEIRIMPIVGNLKTLPGPKDDPDGGYRSRFRHETEIAKPGYYSVFLDDYGILAELTASTRVGVHRYTFPKTDE AYIILDLYHRIGDMAEKAWVKIVGNDEIEGYITGGHFCGARSPHTIYFVAKFSKPFEEFGTWKVFRIEPGNRKEKLRSRS DPFVGAYVRYSTEENEKIIIKVAVSYTGIEGARKNLSEVPDWDFDRVKKEAFAAWVKELNKIEVEGKIGDKIKFYTALYH SFIAPNIFSDIDGKYIGPDDKVHSADYPHYTVFSLWDTFRALHPLFVLLQPERNVDMIKSLLDIYDQSGWLPKWYKANRF TNCMIGTHADSVIADAYVKGLEGFDLQKAYKAMLKNATKTSRCFYEARGGLKYYIKKGYVPADRVGEATSRTLEFAYDDF CIAQFAKKLGKLKDYEKFMERSKNYKNVFDRETGFMRGRKYNGRWMDENNFDPAKVYKYFTEGNSWQWTFFVVSDMYGLI GLMGGKEAFSKKLDRFFSEDSNVDGPPDITGLIGQYAHGNEPSHHAAYLYVYANEPWKTQKMVRYIMDNLYQTGPEGLCG NDDCGQMSAWYVFSAMGFYPVCPGTPYYVIGSPIFNKVVVHLNNKRDFEIVAKNNSKDNLYISRAILNDKEIKRAWINHE EIIKGTKLVFEMSAKPDFSWGLENVPME
Sequences:
>Translated_748_residues MKSFFVSLMLVFSIISPASVLDYVDPFIGTGGHGHTFPGATVPFGMVQLSPDTDIKGWDWCSGYHYSDSSIMGFSHTHLS GTGAADYGEIRIMPIVGNLKTLPGPKDDPDGGYRSRFRHETEIAKPGYYSVFLDDYGILAELTASTRVGVHRYTFPKTDE AYIILDLYHRIGDMAEKAWVKIVGNDEIEGYITGGHFCGARSPHTIYFVAKFSKPFEEFGTWKVFRIEPGNRKEKLRSRS DPFVGAYVRYSTEENEKIIIKVAVSYTGIEGARKNLSEVPDWDFDRVKKEAFAAWVKELNKIEVEGKIGDKIKFYTALYH SFIAPNIFSDIDGKYIGPDDKVHSADYPHYTVFSLWDTFRALHPLFVLLQPERNVDMIKSLLDIYDQSGWLPKWYKANRF TNCMIGTHADSVIADAYVKGLEGFDLQKAYKAMLKNATKTSRCFYEARGGLKYYIKKGYVPADRVGEATSRTLEFAYDDF CIAQFAKKLGKLKDYEKFMERSKNYKNVFDRETGFMRGRKYNGRWMDENNFDPAKVYKYFTEGNSWQWTFFVVSDMYGLI GLMGGKEAFSKKLDRFFSEDSNVDGPPDITGLIGQYAHGNEPSHHAAYLYVYANEPWKTQKMVRYIMDNLYQTGPEGLCG NDDCGQMSAWYVFSAMGFYPVCPGTPYYVIGSPIFNKVVVHLNNKRDFEIVAKNNSKDNLYISRAILNDKEIKRAWINHE EIIKGTKLVFEMSAKPDFSWGLENVPME >Mature_748_residues MKSFFVSLMLVFSIISPASVLDYVDPFIGTGGHGHTFPGATVPFGMVQLSPDTDIKGWDWCSGYHYSDSSIMGFSHTHLS GTGAADYGEIRIMPIVGNLKTLPGPKDDPDGGYRSRFRHETEIAKPGYYSVFLDDYGILAELTASTRVGVHRYTFPKTDE AYIILDLYHRIGDMAEKAWVKIVGNDEIEGYITGGHFCGARSPHTIYFVAKFSKPFEEFGTWKVFRIEPGNRKEKLRSRS DPFVGAYVRYSTEENEKIIIKVAVSYTGIEGARKNLSEVPDWDFDRVKKEAFAAWVKELNKIEVEGKIGDKIKFYTALYH SFIAPNIFSDIDGKYIGPDDKVHSADYPHYTVFSLWDTFRALHPLFVLLQPERNVDMIKSLLDIYDQSGWLPKWYKANRF TNCMIGTHADSVIADAYVKGLEGFDLQKAYKAMLKNATKTSRCFYEARGGLKYYIKKGYVPADRVGEATSRTLEFAYDDF CIAQFAKKLGKLKDYEKFMERSKNYKNVFDRETGFMRGRKYNGRWMDENNFDPAKVYKYFTEGNSWQWTFFVVSDMYGLI GLMGGKEAFSKKLDRFFSEDSNVDGPPDITGLIGQYAHGNEPSHHAAYLYVYANEPWKTQKMVRYIMDNLYQTGPEGLCG NDDCGQMSAWYVFSAMGFYPVCPGTPYYVIGSPIFNKVVVHLNNKRDFEIVAKNNSKDNLYISRAILNDKEIKRAWINHE EIIKGTKLVFEMSAKPDFSWGLENVPME
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85425; Mature: 85425
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFFVSLMLVFSIISPASVLDYVDPFIGTGGHGHTFPGATVPFGMVQLSPDTDIKGWDW CHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC CSGYHYSDSSIMGFSHTHLSGTGAADYGEIRIMPIVGNLKTLPGPKDDPDGGYRSRFRHE CCCEEECCCCEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCH TEIAKPGYYSVFLDDYGILAELTASTRVGVHRYTFPKTDEAYIILDLYHRIGDMAEKAWV HHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCEE KIVGNDEIEGYITGGHFCGARSPHTIYFVAKFSKPFEEFGTWKVFRIEPGNRKEKLRSRS EEECCCCEEEEEECCEECCCCCCCEEEEEEECCCCHHHHCCEEEEEECCCCHHHHHHCCC DPFVGAYVRYSTEENEKIIIKVAVSYTGIEGARKNLSEVPDWDFDRVKKEAFAAWVKELN CCCEEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KIEVEGKIGDKIKFYTALYHSFIAPNIFSDIDGKYIGPDDKVHSADYPHYTVFSLWDTFR EEEEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHH ALHPLFVLLQPERNVDMIKSLLDIYDQSGWLPKWYKANRFTNCMIGTHADSVIADAYVKG HHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHC LEGFDLQKAYKAMLKNATKTSRCFYEARGGLKYYIKKGYVPADRVGEATSRTLEFAYDDF CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHH CIAQFAKKLGKLKDYEKFMERSKNYKNVFDRETGFMRGRKYNGRWMDENNFDPAKVYKYF HHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH TEGNSWQWTFFVVSDMYGLIGLMGGKEAFSKKLDRFFSEDSNVDGPPDITGLIGQYAHGN CCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC EPSHHAAYLYVYANEPWKTQKMVRYIMDNLYQTGPEGLCGNDDCGQMSAWYVFSAMGFYP CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEE VCPGTPYYVIGSPIFNKVVVHLNNKRDFEIVAKNNSKDNLYISRAILNDKEIKRAWINHE CCCCCCEEEECCHHHCEEEEEECCCCCEEEEECCCCCCCEEEEEEHHCHHHHHHHHCCHH EIIKGTKLVFEMSAKPDFSWGLENVPME HHHCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKSFFVSLMLVFSIISPASVLDYVDPFIGTGGHGHTFPGATVPFGMVQLSPDTDIKGWDW CHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC CSGYHYSDSSIMGFSHTHLSGTGAADYGEIRIMPIVGNLKTLPGPKDDPDGGYRSRFRHE CCCEEECCCCEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCH TEIAKPGYYSVFLDDYGILAELTASTRVGVHRYTFPKTDEAYIILDLYHRIGDMAEKAWV HHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCEE KIVGNDEIEGYITGGHFCGARSPHTIYFVAKFSKPFEEFGTWKVFRIEPGNRKEKLRSRS EEECCCCEEEEEECCEECCCCCCCEEEEEEECCCCHHHHCCEEEEEECCCCHHHHHHCCC DPFVGAYVRYSTEENEKIIIKVAVSYTGIEGARKNLSEVPDWDFDRVKKEAFAAWVKELN CCCEEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KIEVEGKIGDKIKFYTALYHSFIAPNIFSDIDGKYIGPDDKVHSADYPHYTVFSLWDTFR EEEEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHH ALHPLFVLLQPERNVDMIKSLLDIYDQSGWLPKWYKANRFTNCMIGTHADSVIADAYVKG HHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHC LEGFDLQKAYKAMLKNATKTSRCFYEARGGLKYYIKKGYVPADRVGEATSRTLEFAYDDF CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHH CIAQFAKKLGKLKDYEKFMERSKNYKNVFDRETGFMRGRKYNGRWMDENNFDPAKVYKYF HHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH TEGNSWQWTFFVVSDMYGLIGLMGGKEAFSKKLDRFFSEDSNVDGPPDITGLIGQYAHGN CCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC EPSHHAAYLYVYANEPWKTQKMVRYIMDNLYQTGPEGLCGNDDCGQMSAWYVFSAMGFYP CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEE VCPGTPYYVIGSPIFNKVVVHLNNKRDFEIVAKNNSKDNLYISRAILNDKEIKRAWINHE CCCCCCEEEECCHHHCEEEEEECCCCCEEEEECCCCCCCEEEEEEHHCHHHHHHHHCCHH EIIKGTKLVFEMSAKPDFSWGLENVPME HHHCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA