| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616864
Identifier: 239616864
GI number: 239616864
Start: 486974
End: 488191
Strand: Direct
Name: 239616864
Synonym: Kole_0459
Alternate gene names: NA
Gene position: 486974-488191 (Clockwise)
Preceding gene: 239616863
Following gene: 239616865
Centisome position: 21.15
GC content: 40.23
Gene sequence:
>1218_bases TTGGCGTTTACGAAAGATAGGCAGTTTTACAAGTTTGCAGCTTATGGCTTCTTAAAAAACTTACGGTTTTTCGAACCATT TCTAATTCTCTTCTTTCGTGAAATGGGGCTTTCATTTTTACAGATAGGAATGCTCTTCTCGATAAGAGAAATTGCTACCA ATCTTCTCGAACTACCTACGGGACTCGTTGCGGATATATACGGCAGACGAATCTCCATGCTTTTTTCTATGACATCTTAT ATCATTTCTTTCATAATTTTCTATTTCTTCCCGAATTTCTATATTTATGCTCTAGCAATGGTTCTCTTTGCCTTTGGTGA AGCTTTCAGGACCGGAACACACAAGGCCATGATCCTCGAGTACCTTCGCATGAATAAAATACTCGACAAAAGGGTAGAGT ATTATGGTTCAACCCGTGCCGCTTCACAACTTGGCTCAGCTATAAACTCACTCATCGCTGCGGCCATAGTCTTTTACAGC GGCAATTACAAGGTAGTCTTTCTCGCTGCAACGTTACCATATATCTTCAATCTCATAAACCTCGCAACGTATCCGAAGGA ACTTGATGGAGAGATCAAAAAGACCGGAAAACAGGAGACCTTCAAAGAGTTTTTTGGTATATTCAAGAACAAAGATTCTC TAAAAGGTATCATGAACTCTTCTATCTTCGATGCATTTTTCAAAACCGTTAAAGAGTACCTGCAACCGGTTTTAAAATCT CTGGCACTTTCCCTGCCTGTAATGCTAGCGTTCAGTAATAATGAAAGAACAGCGGTAGTCGTCGGCATTGTATATTTCTT TATCTATCTGGCAACAAGCTATGCTTCGAAGAATGCATCGAAAGTAGCTAAAAAGATCGGAAATAAGGAAAAAGCTATCA ATATCACTTATCTGTTGGGAGCGGTTTTAATAATACTCTCCGGTGTCTCTCAGCGCCTCAATTTCCAGATTGGCGCGGTG ATCTTTTTCCTGATACTATTTGTTATTGAAAACATACGAAGGCCCCTGAACGTAGCTTATATCAGCGAAAAGATATCCCA TAAAACCATGGCATCGGGATTGTCCGCAGAATCACAGTTGAAAACTCTTTTAACAGCTGTTCTAGCACCAACAATAGGGT TTCTTGCTGACAAAATTACCATCGGTGGTGCATTGGTTGTCTGTGGGTTCGTGATGTCCATATTCTATTTGCTGATCCGT CTGCGTGAAGAAAAATGA
Upstream 100 bases:
>100_bases AGATCTCTTAAACTAAGCGATTCAGACCTCGAGAAAGTCAAAGAGGTTTTAAACAACGAATCGTAACTGTGTGATCTGAA AGGATAAGGAGGAAACACCA
Downstream 100 bases:
>100_bases CCATCAGGAGGGATAAAAAGTGAAAGCAATGATTCTCGCCGCCGGAAAAGGAACAAGGGTAAGACCTTTAACAAACAAAA TTCCAAAGCCCATGATACCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Transporter; Multidrug Efflux Protein Variant
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MAFTKDRQFYKFAAYGFLKNLRFFEPFLILFFREMGLSFLQIGMLFSIREIATNLLELPTGLVADIYGRRISMLFSMTSY IISFIIFYFFPNFYIYALAMVLFAFGEAFRTGTHKAMILEYLRMNKILDKRVEYYGSTRAASQLGSAINSLIAAAIVFYS GNYKVVFLAATLPYIFNLINLATYPKELDGEIKKTGKQETFKEFFGIFKNKDSLKGIMNSSIFDAFFKTVKEYLQPVLKS LALSLPVMLAFSNNERTAVVVGIVYFFIYLATSYASKNASKVAKKIGNKEKAINITYLLGAVLIILSGVSQRLNFQIGAV IFFLILFVIENIRRPLNVAYISEKISHKTMASGLSAESQLKTLLTAVLAPTIGFLADKITIGGALVVCGFVMSIFYLLIR LREEK
Sequences:
>Translated_405_residues MAFTKDRQFYKFAAYGFLKNLRFFEPFLILFFREMGLSFLQIGMLFSIREIATNLLELPTGLVADIYGRRISMLFSMTSY IISFIIFYFFPNFYIYALAMVLFAFGEAFRTGTHKAMILEYLRMNKILDKRVEYYGSTRAASQLGSAINSLIAAAIVFYS GNYKVVFLAATLPYIFNLINLATYPKELDGEIKKTGKQETFKEFFGIFKNKDSLKGIMNSSIFDAFFKTVKEYLQPVLKS LALSLPVMLAFSNNERTAVVVGIVYFFIYLATSYASKNASKVAKKIGNKEKAINITYLLGAVLIILSGVSQRLNFQIGAV IFFLILFVIENIRRPLNVAYISEKISHKTMASGLSAESQLKTLLTAVLAPTIGFLADKITIGGALVVCGFVMSIFYLLIR LREEK >Mature_404_residues AFTKDRQFYKFAAYGFLKNLRFFEPFLILFFREMGLSFLQIGMLFSIREIATNLLELPTGLVADIYGRRISMLFSMTSYI ISFIIFYFFPNFYIYALAMVLFAFGEAFRTGTHKAMILEYLRMNKILDKRVEYYGSTRAASQLGSAINSLIAAAIVFYSG NYKVVFLAATLPYIFNLINLATYPKELDGEIKKTGKQETFKEFFGIFKNKDSLKGIMNSSIFDAFFKTVKEYLQPVLKSL ALSLPVMLAFSNNERTAVVVGIVYFFIYLATSYASKNASKVAKKIGNKEKAINITYLLGAVLIILSGVSQRLNFQIGAVI FFLILFVIENIRRPLNVAYISEKISHKTMASGLSAESQLKTLLTAVLAPTIGFLADKITIGGALVVCGFVMSIFYLLIRL REEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45749; Mature: 45618
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTKDRQFYKFAAYGFLKNLRFFEPFLILFFREMGLSFLQIGMLFSIREIATNLLELPT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLVADIYGRRISMLFSMTSYIISFIIFYFFPNFYIYALAMVLFAFGEAFRTGTHKAMILE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH YLRMNKILDKRVEYYGSTRAASQLGSAINSLIAAAIVFYSGNYKVVFLAATLPYIFNLIN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH LATYPKELDGEIKKTGKQETFKEFFGIFKNKDSLKGIMNSSIFDAFFKTVKEYLQPVLKS HHHCCHHHCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALSLPVMLAFSNNERTAVVVGIVYFFIYLATSYASKNASKVAKKIGNKEKAINITYLLG HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH AVLIILSGVSQRLNFQIGAVIFFLILFVIENIRRPLNVAYISEKISHKTMASGLSAESQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH KTLLTAVLAPTIGFLADKITIGGALVVCGFVMSIFYLLIRLREEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFTKDRQFYKFAAYGFLKNLRFFEPFLILFFREMGLSFLQIGMLFSIREIATNLLELPT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLVADIYGRRISMLFSMTSYIISFIIFYFFPNFYIYALAMVLFAFGEAFRTGTHKAMILE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH YLRMNKILDKRVEYYGSTRAASQLGSAINSLIAAAIVFYSGNYKVVFLAATLPYIFNLIN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH LATYPKELDGEIKKTGKQETFKEFFGIFKNKDSLKGIMNSSIFDAFFKTVKEYLQPVLKS HHHCCHHHCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALSLPVMLAFSNNERTAVVVGIVYFFIYLATSYASKNASKVAKKIGNKEKAINITYLLG HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH AVLIILSGVSQRLNFQIGAVIFFLILFVIENIRRPLNVAYISEKISHKTMASGLSAESQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH KTLLTAVLAPTIGFLADKITIGGALVVCGFVMSIFYLLIRLREEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA