| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is ywrA [H]
Identifier: 239616840
GI number: 239616840
Start: 464300
End: 464830
Strand: Reverse
Name: ywrA [H]
Synonym: Kole_0435
Alternate gene names: 239616840
Gene position: 464830-464300 (Counterclockwise)
Preceding gene: 239616849
Following gene: 239616839
Centisome position: 20.19
GC content: 42.37
Gene sequence:
>531_bases ATGAATGCATTTGGATTGTTCCTGACATTTTCGAAAATAAGCCTGTTAACGGTGGGCGGCGGCTACGCCATGATTCCCGT TATAAGGGAACAACTTGTGGTTAAGCGTGGCTTGATAAGTGACTCCGAATTTCTTGACGCTGTTGTCCGTGCTCAATCGG TTCCAGGAGCAATAGCGGTTAACCTATCCCTGATAATTGGCAAGAGGATAGCCGGGATCCCGGGTTCAATTGGATCGTTG CTTGGGGTTGTCGTTCCTCCTTTTTTGGTTATTCTTCTAATTGCCATGATATTTACGGAGTTCGTAAGTACTCCTGTGTT TTCGGGATTTTTGAAAGGGGTAAGAATTGGAATCACCGCGGCACTTATAATACTTTCTTTTAGTCTTATAAAAGAAAGCA CGAAACAGATTAAAACCCTTGTGACAATAGCTGTATTTGCATTTGCCATTGTCATCTTTCAGCTTCCATCGTTTTGGGGA CTCCTTTTATGTGGCGCTTTGATTTATATCTTTCATGGAGGAAAAAGATGA
Upstream 100 bases:
>100_bases GCGCAATCTGGTTTCCATCTTTTCACCCCCTTAATAAATTCTAACATGGAAGAGACGATTAAAAGCGTATCATGTAAAAT ATTCAGTAGGGAGTGAAAAG
Downstream 100 bases:
>100_bases TCGAGCTCTTTCTTACTTTTCTCAAGATAGGTTTTTTGGCTTTTGGAGGGGGATACGGTGCTCTTGGGTTGATTCAGGAT GAGGTAGTTGTTGTTCACAG
Product: Chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNAFGLFLTFSKISLLTVGGGYAMIPVIREQLVVKRGLISDSEFLDAVVRAQSVPGAIAVNLSLIIGKRIAGIPGSIGSL LGVVVPPFLVILLIAMIFTEFVSTPVFSGFLKGVRIGITAALIILSFSLIKESTKQIKTLVTIAVFAFAIVIFQLPSFWG LLLCGALIYIFHGGKR
Sequences:
>Translated_176_residues MNAFGLFLTFSKISLLTVGGGYAMIPVIREQLVVKRGLISDSEFLDAVVRAQSVPGAIAVNLSLIIGKRIAGIPGSIGSL LGVVVPPFLVILLIAMIFTEFVSTPVFSGFLKGVRIGITAALIILSFSLIKESTKQIKTLVTIAVFAFAIVIFQLPSFWG LLLCGALIYIFHGGKR >Mature_176_residues MNAFGLFLTFSKISLLTVGGGYAMIPVIREQLVVKRGLISDSEFLDAVVRAQSVPGAIAVNLSLIIGKRIAGIPGSIGSL LGVVVPPFLVILLIAMIFTEFVSTPVFSGFLKGVRIGITAALIILSFSLIKESTKQIKTLVTIAVFAFAIVIFQLPSFWG LLLCGALIYIFHGGKR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18768; Mature: 18768
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFGLFLTFSKISLLTVGGGYAMIPVIREQLVVKRGLISDSEFLDAVVRAQSVPGAIAV CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH NLSLIIGKRIAGIPGSIGSLLGVVVPPFLVILLIAMIFTEFVSTPVFSGFLKGVRIGITA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIILSFSLIKESTKQIKTLVTIAVFAFAIVIFQLPSFWGLLLCGALIYIFHGGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNAFGLFLTFSKISLLTVGGGYAMIPVIREQLVVKRGLISDSEFLDAVVRAQSVPGAIAV CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH NLSLIIGKRIAGIPGSIGSLLGVVVPPFLVILLIAMIFTEFVSTPVFSGFLKGVRIGITA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIILSFSLIKESTKQIKTLVTIAVFAFAIVIFQLPSFWGLLLCGALIYIFHGGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]