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The map label for this gene is 239616830

Identifier: 239616830

GI number: 239616830

Start: 453169

End: 454032

Strand: Direct

Name: 239616830

Synonym: Kole_0423

Alternate gene names: NA

Gene position: 453169-454032 (Clockwise)

Preceding gene: 239616828

Following gene: 239616831

Centisome position: 19.68

GC content: 40.28

Gene sequence:

>864_bases
ATGATAGGCATTCTCTGTGACTCTGCAACAGATGTCCCCGATGGAATAGCTAAAAGCGGTCACGTTGAGGTTGTCCCGGT
ACGGGTAGTCATAGATTCTCAAACCTTCAGAGACAATGAGATAAAACGTGAAGAATTGCTTCGCTTAATGGAAAATGGGA
CCATTCCAAAAACTTCAATTCCGGCTTACTCCGATGTGGAAAAAGGGTTCTTTCGCCTTATGAGCAAAGGAATCAATGAA
ATCATTTGTATAAACATTGCCGGAAGTCAAAGCGGGACGCTAAACCTTTTTCGGATGACAGCAGAAAGCTTTCAAAAAAC
ATTTTCGCACCTCAAAATAAAGATCGTTGATTCCAGAAGTGTTTCCATTGGCTCTGCACTTTTGATATTCAAAGCTTTCA
AACTCATAGAATCAGGAAACAACATTGACAAAATAGTCAGCACCTTAAAAGAGTACGTTGAAAAGAAAATAAAGGTTTTG
TTTACACTTCCCACTCTGAAATTTCTCAAAGCAGGCGGTCGAATAGGAAAGATAAGTGCTACCATAGCAGAGCTATTGAA
TATTAAACCGGTTATAGGTCTTGAAAAGGATGGAACCTTTTACAGTGCAGCCAAAGTCAGAGGAATGAATAGAGCCATCA
AAAAAATGGCGGAATTGACGCAAGAATTTATCAACGAAAGGGACGTAGAAGCATTAGCAATTTACAGATCCAGCGATGAT
GAAGGAACATTGAACCTTGCCAAAATGCTCCTTCATGAATTTAAAAACGTAAAAATAGAAAAACTCTTCACCGGGATAAT
CTCTCCAGCCCTACTCGTGCACGGCGGAAGAGGTCTCGTTGGCATCTCTACAATGGTGAGATAA

Upstream 100 bases:

>100_bases
ATTATGTTCTTTTTTTGCTTTCGTGCGAAAAGAAGTATAATAAATTGTTGGGATTTAAATGCACATGACATTCACTAAAA
ACAAAAAAGGAGGTTCAGGC

Downstream 100 bases:

>100_bases
TATCAAAAAGGGATGGAAAGGACTGGATTAAAATGGCATATTCCCATAGAAAAAAACACGGGCATTCACATAGTTTTGAG
GATACCTCTGAAAGACGATT

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIGILCDSATDVPDGIAKSGHVEVVPVRVVIDSQTFRDNEIKREELLRLMENGTIPKTSIPAYSDVEKGFFRLMSKGINE
IICINIAGSQSGTLNLFRMTAESFQKTFSHLKIKIVDSRSVSIGSALLIFKAFKLIESGNNIDKIVSTLKEYVEKKIKVL
FTLPTLKFLKAGGRIGKISATIAELLNIKPVIGLEKDGTFYSAAKVRGMNRAIKKMAELTQEFINERDVEALAIYRSSDD
EGTLNLAKMLLHEFKNVKIEKLFTGIISPALLVHGGRGLVGISTMVR

Sequences:

>Translated_287_residues
MIGILCDSATDVPDGIAKSGHVEVVPVRVVIDSQTFRDNEIKREELLRLMENGTIPKTSIPAYSDVEKGFFRLMSKGINE
IICINIAGSQSGTLNLFRMTAESFQKTFSHLKIKIVDSRSVSIGSALLIFKAFKLIESGNNIDKIVSTLKEYVEKKIKVL
FTLPTLKFLKAGGRIGKISATIAELLNIKPVIGLEKDGTFYSAAKVRGMNRAIKKMAELTQEFINERDVEALAIYRSSDD
EGTLNLAKMLLHEFKNVKIEKLFTGIISPALLVHGGRGLVGISTMVR
>Mature_287_residues
MIGILCDSATDVPDGIAKSGHVEVVPVRVVIDSQTFRDNEIKREELLRLMENGTIPKTSIPAYSDVEKGFFRLMSKGINE
IICINIAGSQSGTLNLFRMTAESFQKTFSHLKIKIVDSRSVSIGSALLIFKAFKLIESGNNIDKIVSTLKEYVEKKIKVL
FTLPTLKFLKAGGRIGKISATIAELLNIKPVIGLEKDGTFYSAAKVRGMNRAIKKMAELTQEFINERDVEALAIYRSSDD
EGTLNLAKMLLHEFKNVKIEKLFTGIISPALLVHGGRGLVGISTMVR

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31662; Mature: 31662

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGILCDSATDVPDGIAKSGHVEVVPVRVVIDSQTFRDNEIKREELLRLMENGTIPKTSI
CEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC
PAYSDVEKGFFRLMSKGINEIICINIAGSQSGTLNLFRMTAESFQKTFSHLKIKIVDSRS
CCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC
VSIGSALLIFKAFKLIESGNNIDKIVSTLKEYVEKKIKVLFTLPTLKFLKAGGRIGKISA
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCHHHH
TIAELLNIKPVIGLEKDGTFYSAAKVRGMNRAIKKMAELTQEFINERDVEALAIYRSSDD
HHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
EGTLNLAKMLLHEFKNVKIEKLFTGIISPALLVHGGRGLVGISTMVR
CCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHEEECCCCEEHHHHHCC
>Mature Secondary Structure
MIGILCDSATDVPDGIAKSGHVEVVPVRVVIDSQTFRDNEIKREELLRLMENGTIPKTSI
CEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC
PAYSDVEKGFFRLMSKGINEIICINIAGSQSGTLNLFRMTAESFQKTFSHLKIKIVDSRS
CCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCC
VSIGSALLIFKAFKLIESGNNIDKIVSTLKEYVEKKIKVLFTLPTLKFLKAGGRIGKISA
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCHHHH
TIAELLNIKPVIGLEKDGTFYSAAKVRGMNRAIKKMAELTQEFINERDVEALAIYRSSDD
HHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
EGTLNLAKMLLHEFKNVKIEKLFTGIISPALLVHGGRGLVGISTMVR
CCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHEEECCCCEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]