Click here to switch to the map view.

The map label for this gene is 239616829

Identifier: 239616829

GI number: 239616829

Start: 451427

End: 452977

Strand: Reverse

Name: 239616829

Synonym: Kole_0422

Alternate gene names: NA

Gene position: 452977-451427 (Counterclockwise)

Preceding gene: 239616837

Following gene: 239616827

Centisome position: 19.68

GC content: 39.39

Gene sequence:

>1551_bases
TTGAAAAACATACTAATGGTCTATCCAGAATATCCGGACACCTTCTGGGGATTCAAGCACGCTCTGAAGTTTGCTTCTAA
AAGGGCTGCATTACCTCCATTGGGATTGCTGACGATCGCTTCTTATCTTCCAGATGAATGGAATATAAAGTTGGTCGATA
TGAACTGTGAGAGGTTGAAAGAAAAGGATGTTAGAAACAGTGATTACGTTTTTATAAGCGCTATGGCTGTACAACGTGAA
TCTGTCAAAGATGTCATACGGCGATGCAACGAATTGAATGTTCCGGTTATTGCAGGTGGACCGCTATTCACAATGGAACC
CGATCATTTTCCGAATGCAGATCATTTCGTTTTAGGAGAAGCTGAAGAGATCATGCCAGAACTCGTAGAAGATATTGAAA
ATGGCAAATTGAAGAGATATTACGCAAGCCCGGATTTTCCTGATATAACAAAAGCACCTGTTCCCAGATGGGATCTTTTA
CATCTCAAGTGGTATTACTCGATGGGGATACAGTATTCCAGGGGCTGTCCATTCGACTGTGAGTTTTGTGAGATAGGTGC
ACTTAATGGCCATGTTCCAAGATCGAAAAGTACAGAACAGATTATTCAAGAATTGCAAACCCTCTATGATTTGGGATGGA
GAAGATCTGTTTTTTTTGTGGACGATAACTTCATCGGGAAAAGATTTGACCTCAAACGGAAAGTTTTACCAGCTATTATC
GAATGGCAAAAAGCGCATAACTACCCTTTCACATTCTACACGGAAGTATCCATAGATCTTGCGGATGACGATGAACTAGT
AAACTTGATGACCCGGGCGGGATTTAACAGGGTTTTTGTTGGTATAGAAACTCCGGATAAGGAGAGTCTTAAGGAAACAA
ACAAATATCAGAATATCAAACATAATCTGGAGAAATCCGTAGAGAAATTACATTCTTCAGGTCTTGAAGTACAGGGGGGG
TTCATCATAGGGTTTGACCATGATACGCCTTCTATATTCAAGCGTCAATTCAGTTTCATTCAACGAACGGGTATAGTAAC
GGCCATGGTTGGCATGCTGAATGCTCCTCGTGGAAGCAAGCTTTACGAGCGGATGCGTAATGAAGGCAGATTGATCAGTG
AGTTTGTTGAAAATAACGTGGAGATTTCCATAAATTTTATTCCCAGAATGAATATAAAAACCCTGATCTCCGGTTATCAA
AGGCTTATGAAACAACTTTATTCTCCCGTAAATTACTATAGACGGTTAAGAAAATTCTTGTCTGTCTATAAATTCCCCAA
TACTTTTAGATTGAAAAAAATAACTTTCATAGAAATCAAAGCCTTTTTAAGGTCGCTTGTGGTGATAGGGATATTTGGTA
AAGAAAGGTTTGAGTACTGGAAATTACTCATATGGAGCCTCTTCAAAAAAAGAAGGCATTTTCCACTGGTCGTGGCGCTT
GCAATATCAGGTTATCATTTCAGGAAAATAGCCGAGAAAATTTCAAAAAAGAAGGTTTCATTGATATTCGAAAAACCTTT
CTCTTCCGGAAATCTTGCCGCTAAGATGTAA

Upstream 100 bases:

>100_bases
GAACATAATGCGAATTAATCTCTTAAAAGGTTTGGATTAAAAGATACAAGATGAGATACTAGTTTCAGGAGAAGAATTTT
CAGGAAAGGTGGTGTCGCTT

Downstream 100 bases:

>100_bases
TCAGTGTGGCTTTGACTCCACGAAGAGCCTCGAGATAAATCTGATTATCCTTCGTTTCATTAACCAACGCCAGATATTCA
TTATCTCTTTTTTGAAGCCC

Product: Radical SAM domain protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKNILMVYPEYPDTFWGFKHALKFASKRAALPPLGLLTIASYLPDEWNIKLVDMNCERLKEKDVRNSDYVFISAMAVQRE
SVKDVIRRCNELNVPVIAGGPLFTMEPDHFPNADHFVLGEAEEIMPELVEDIENGKLKRYYASPDFPDITKAPVPRWDLL
HLKWYYSMGIQYSRGCPFDCEFCEIGALNGHVPRSKSTEQIIQELQTLYDLGWRRSVFFVDDNFIGKRFDLKRKVLPAII
EWQKAHNYPFTFYTEVSIDLADDDELVNLMTRAGFNRVFVGIETPDKESLKETNKYQNIKHNLEKSVEKLHSSGLEVQGG
FIIGFDHDTPSIFKRQFSFIQRTGIVTAMVGMLNAPRGSKLYERMRNEGRLISEFVENNVEISINFIPRMNIKTLISGYQ
RLMKQLYSPVNYYRRLRKFLSVYKFPNTFRLKKITFIEIKAFLRSLVVIGIFGKERFEYWKLLIWSLFKKRRHFPLVVAL
AISGYHFRKIAEKISKKKVSLIFEKPFSSGNLAAKM

Sequences:

>Translated_516_residues
MKNILMVYPEYPDTFWGFKHALKFASKRAALPPLGLLTIASYLPDEWNIKLVDMNCERLKEKDVRNSDYVFISAMAVQRE
SVKDVIRRCNELNVPVIAGGPLFTMEPDHFPNADHFVLGEAEEIMPELVEDIENGKLKRYYASPDFPDITKAPVPRWDLL
HLKWYYSMGIQYSRGCPFDCEFCEIGALNGHVPRSKSTEQIIQELQTLYDLGWRRSVFFVDDNFIGKRFDLKRKVLPAII
EWQKAHNYPFTFYTEVSIDLADDDELVNLMTRAGFNRVFVGIETPDKESLKETNKYQNIKHNLEKSVEKLHSSGLEVQGG
FIIGFDHDTPSIFKRQFSFIQRTGIVTAMVGMLNAPRGSKLYERMRNEGRLISEFVENNVEISINFIPRMNIKTLISGYQ
RLMKQLYSPVNYYRRLRKFLSVYKFPNTFRLKKITFIEIKAFLRSLVVIGIFGKERFEYWKLLIWSLFKKRRHFPLVVAL
AISGYHFRKIAEKISKKKVSLIFEKPFSSGNLAAKM
>Mature_516_residues
MKNILMVYPEYPDTFWGFKHALKFASKRAALPPLGLLTIASYLPDEWNIKLVDMNCERLKEKDVRNSDYVFISAMAVQRE
SVKDVIRRCNELNVPVIAGGPLFTMEPDHFPNADHFVLGEAEEIMPELVEDIENGKLKRYYASPDFPDITKAPVPRWDLL
HLKWYYSMGIQYSRGCPFDCEFCEIGALNGHVPRSKSTEQIIQELQTLYDLGWRRSVFFVDDNFIGKRFDLKRKVLPAII
EWQKAHNYPFTFYTEVSIDLADDDELVNLMTRAGFNRVFVGIETPDKESLKETNKYQNIKHNLEKSVEKLHSSGLEVQGG
FIIGFDHDTPSIFKRQFSFIQRTGIVTAMVGMLNAPRGSKLYERMRNEGRLISEFVENNVEISINFIPRMNIKTLISGYQ
RLMKQLYSPVNYYRRLRKFLSVYKFPNTFRLKKITFIEIKAFLRSLVVIGIFGKERFEYWKLLIWSLFKKRRHFPLVVAL
AISGYHFRKIAEKISKKKVSLIFEKPFSSGNLAAKM

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60198; Mature: 60198

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILMVYPEYPDTFWGFKHALKFASKRAALPPLGLLTIASYLPDEWNIKLVDMNCERLK
CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHH
EKDVRNSDYVFISAMAVQRESVKDVIRRCNELNVPVIAGGPLFTMEPDHFPNADHFVLGE
HHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCEEEECC
AEEIMPELVEDIENGKLKRYYASPDFPDITKAPVPRWDLLHLKWYYSMGIQYSRGCPFDC
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCC
EFCEIGALNGHVPRSKSTEQIIQELQTLYDLGWRRSVFFVDDNFIGKRFDLKRKVLPAII
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
EWQKAHNYPFTFYTEVSIDLADDDELVNLMTRAGFNRVFVGIETPDKESLKETNKYQNIK
HHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
HNLEKSVEKLHSSGLEVQGGFIIGFDHDTPSIFKRQFSFIQRTGIVTAMVGMLNAPRGSK
HHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LYERMRNEGRLISEFVENNVEISINFIPRMNIKTLISGYQRLMKQLYSPVNYYRRLRKFL
HHHHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYKFPNTFRLKKITFIEIKAFLRSLVVIGIFGKERFEYWKLLIWSLFKKRRHFPLVVAL
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
AISGYHFRKIAEKISKKKVSLIFEKPFSSGNLAAKM
ECCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEECC
>Mature Secondary Structure
MKNILMVYPEYPDTFWGFKHALKFASKRAALPPLGLLTIASYLPDEWNIKLVDMNCERLK
CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHH
EKDVRNSDYVFISAMAVQRESVKDVIRRCNELNVPVIAGGPLFTMEPDHFPNADHFVLGE
HHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCEEEECC
AEEIMPELVEDIENGKLKRYYASPDFPDITKAPVPRWDLLHLKWYYSMGIQYSRGCPFDC
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCC
EFCEIGALNGHVPRSKSTEQIIQELQTLYDLGWRRSVFFVDDNFIGKRFDLKRKVLPAII
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
EWQKAHNYPFTFYTEVSIDLADDDELVNLMTRAGFNRVFVGIETPDKESLKETNKYQNIK
HHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
HNLEKSVEKLHSSGLEVQGGFIIGFDHDTPSIFKRQFSFIQRTGIVTAMVGMLNAPRGSK
HHHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LYERMRNEGRLISEFVENNVEISINFIPRMNIKTLISGYQRLMKQLYSPVNYYRRLRKFL
HHHHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYKFPNTFRLKKITFIEIKAFLRSLVVIGIFGKERFEYWKLLIWSLFKKRRHFPLVVAL
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
AISGYHFRKIAEKISKKKVSLIFEKPFSSGNLAAKM
ECCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]