Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is 239616827

Identifier: 239616827

GI number: 239616827

Start: 449517

End: 450089

Strand: Reverse

Name: 239616827

Synonym: Kole_0420

Alternate gene names: NA

Gene position: 450089-449517 (Counterclockwise)

Preceding gene: 239616829

Following gene: 239616826

Centisome position: 19.55

GC content: 43.28

Gene sequence:

>573_bases
ATGAGGAACCTTCTGCTGGCGTTCATCGTGAAGAAGACTGTTTTGAGTGTTGTAACTTTACTATTGTTGCTACTCGCGGT
TACTTCCTGTGTAAAGATAGACGAGGCTCTCACAAGCGGTTTCGATTACCTTAAACTCGGGGATTATAATAGTGCGATAT
CGAAGTTTAACAAGGTTTTATTATTCTCAAACGATGAACAGAAAGAAGCTCTTGCTCGTGAGGGAATAGGTTGGGCCTAT
TATATGAAAGACTTCTTAAGTACCTCTGAGAATAATTTTCTCCTTTCGTTGGAGATGGTGCCCTCCAACGCCAACGTGAA
AGCGGGGCTGGTTCTGGTTAATATCAGAAAAGGGAATTGGGATGAAGCTCTAGGCCACGGAGAGTTTATTGTTGATGAAA
CGGAGTTTCAAATTGACTATCTGCCAGACCCTCTTGGAAGGGAAGAACTGCTGAAATTGCTGGCCATTGCCTCGATACAT
GCACATGATGATGCGGCTTATAGTACTTATACAGGTATGATTACGGATCAGGATTTTGTTGATCGCCTCGAACAACTGAA
AGGGGGCGAGTAA

Upstream 100 bases:

>100_bases
ATTAAAATAAAAAAGCAAATGGCAACGTTAACAGCAAATTTTTCAACTAGGTAAAAACAATATAAGAAAGGAGGGAGCCA
GCACACCACTCTGTATTGAA

Downstream 100 bases:

>100_bases
AATGAAGAAAGCTATTATTGTTTTTTTGCTCTTAATAGTAACTTCTTTAGCCTTTTCTGTTCCGGCATATCCGGGAGAGA
TAGCGCTTTCTCAACCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY
YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH
AHDDAAYSTYTGMITDQDFVDRLEQLKGGE

Sequences:

>Translated_190_residues
MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY
YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH
AHDDAAYSTYTGMITDQDFVDRLEQLKGGE
>Mature_190_residues
MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY
YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH
AHDDAAYSTYTGMITDQDFVDRLEQLKGGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21214; Mature: 21214

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCEEE
LFSNDEQKEALAREGIGWAYYMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNW
EECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCH
DEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIHAHDDAAYSTYTGMITDQDFV
HHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHH
DRLEQLKGGE
HHHHHHCCCC
>Mature Secondary Structure
MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCEEE
LFSNDEQKEALAREGIGWAYYMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNW
EECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCH
DEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIHAHDDAAYSTYTGMITDQDFV
HHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHH
DRLEQLKGGE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA