| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616827
Identifier: 239616827
GI number: 239616827
Start: 449517
End: 450089
Strand: Reverse
Name: 239616827
Synonym: Kole_0420
Alternate gene names: NA
Gene position: 450089-449517 (Counterclockwise)
Preceding gene: 239616829
Following gene: 239616826
Centisome position: 19.55
GC content: 43.28
Gene sequence:
>573_bases ATGAGGAACCTTCTGCTGGCGTTCATCGTGAAGAAGACTGTTTTGAGTGTTGTAACTTTACTATTGTTGCTACTCGCGGT TACTTCCTGTGTAAAGATAGACGAGGCTCTCACAAGCGGTTTCGATTACCTTAAACTCGGGGATTATAATAGTGCGATAT CGAAGTTTAACAAGGTTTTATTATTCTCAAACGATGAACAGAAAGAAGCTCTTGCTCGTGAGGGAATAGGTTGGGCCTAT TATATGAAAGACTTCTTAAGTACCTCTGAGAATAATTTTCTCCTTTCGTTGGAGATGGTGCCCTCCAACGCCAACGTGAA AGCGGGGCTGGTTCTGGTTAATATCAGAAAAGGGAATTGGGATGAAGCTCTAGGCCACGGAGAGTTTATTGTTGATGAAA CGGAGTTTCAAATTGACTATCTGCCAGACCCTCTTGGAAGGGAAGAACTGCTGAAATTGCTGGCCATTGCCTCGATACAT GCACATGATGATGCGGCTTATAGTACTTATACAGGTATGATTACGGATCAGGATTTTGTTGATCGCCTCGAACAACTGAA AGGGGGCGAGTAA
Upstream 100 bases:
>100_bases ATTAAAATAAAAAAGCAAATGGCAACGTTAACAGCAAATTTTTCAACTAGGTAAAAACAATATAAGAAAGGAGGGAGCCA GCACACCACTCTGTATTGAA
Downstream 100 bases:
>100_bases AATGAAGAAAGCTATTATTGTTTTTTTGCTCTTAATAGTAACTTCTTTAGCCTTTTCTGTTCCGGCATATCCGGGAGAGA TAGCGCTTTCTCAACCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH AHDDAAYSTYTGMITDQDFVDRLEQLKGGE
Sequences:
>Translated_190_residues MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH AHDDAAYSTYTGMITDQDFVDRLEQLKGGE >Mature_190_residues MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVLLFSNDEQKEALAREGIGWAY YMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNWDEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIH AHDDAAYSTYTGMITDQDFVDRLEQLKGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21214; Mature: 21214
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCEEE LFSNDEQKEALAREGIGWAYYMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNW EECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCH DEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIHAHDDAAYSTYTGMITDQDFV HHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHH DRLEQLKGGE HHHHHHCCCC >Mature Secondary Structure MRNLLLAFIVKKTVLSVVTLLLLLLAVTSCVKIDEALTSGFDYLKLGDYNSAISKFNKVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCEEE LFSNDEQKEALAREGIGWAYYMKDFLSTSENNFLLSLEMVPSNANVKAGLVLVNIRKGNW EECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCH DEALGHGEFIVDETEFQIDYLPDPLGREELLKLLAIASIHAHDDAAYSTYTGMITDQDFV HHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHH DRLEQLKGGE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA