| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616824
Identifier: 239616824
GI number: 239616824
Start: 444382
End: 445152
Strand: Reverse
Name: 239616824
Synonym: Kole_0417
Alternate gene names: NA
Gene position: 445152-444382 (Counterclockwise)
Preceding gene: 239616825
Following gene: 239616823
Centisome position: 19.34
GC content: 41.5
Gene sequence:
>771_bases ATGTTGTACAAAAAAGGATTCACACTTGTTGAGCTGTTAATTGTTCTTGCTATTATTGCTGTTTTAGTTGCTGCACTGAT TCCACCAGCGATGAATTCTATAAGAAAAGCAAAGGCTGTTCAGGTTGCCCGGAACCTGAAGAATCTTTCCATTGGTTTTG AAAATAAGATATTGGTGGATAACGTTCCCCCATTATCAATTGATGAGATTGGAAGGAATATTCCGGACAATTATGGAGTG GCATATGAAGTAAGTAATGGGACATGGTTGGTAGTTGTATATTATACTGGCAAAGATGTTGACTACGATACGCTCAAAAC CATACTACCTGACGTTTCCCAGGACTACGTTCCGTTGAGCTCACCAACAGTATTGTCGGGAAGTCCGTCTTACTCAGAAG ATCCTGAAAACATCTACTATAGCTACGTGATCTCGATAGGTGGCGGGACTCTAGAAGCAGATGTTGAGATCACAAACATT GAATACGCCGCAAATCCTGAAGTGGTTCATATAAAAAATCTCGGAACACTCTCTGTGAATCTTCTTGGGTGGAAGTTGAA AGATATAGCCAACCATATTTTCACATTTCCTAATTTCGTGCTTGAGCCGGGTGAAGAAGTCAGGGTCTATTCCCACGTTA CCGCCAGCTCGCCGATGCCAGAAGGAGAAAATAATTTGAAGTGGACAGGGCAATATGTATGGAACAACGATGGAGATACT GCTTATCTCTACGATTCTTCAGGTGCAACGGTAACCACTTATTCTTATTGA
Upstream 100 bases:
>100_bases CCGACAGATGTCGGGCTTTTTTATAATATAATCAAGAAAAGTTACAAAATACGCTACATTATGGCATGGCCTTGCATCAT TAAAATTAGGAGGCCTATTT
Downstream 100 bases:
>100_bases GGACGGAAATGGATTTCCTGACCAAAAATAGAACATGATATAATCCAGAGAATATAGGATAGTTAGTCAAAGAAATGGAG GCTCTTAAGCTTATGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLYKKGFTLVELLIVLAIIAVLVAALIPPAMNSIRKAKAVQVARNLKNLSIGFENKILVDNVPPLSIDEIGRNIPDNYGV AYEVSNGTWLVVVYYTGKDVDYDTLKTILPDVSQDYVPLSSPTVLSGSPSYSEDPENIYYSYVISIGGGTLEADVEITNI EYAANPEVVHIKNLGTLSVNLLGWKLKDIANHIFTFPNFVLEPGEEVRVYSHVTASSPMPEGENNLKWTGQYVWNNDGDT AYLYDSSGATVTTYSY
Sequences:
>Translated_256_residues MLYKKGFTLVELLIVLAIIAVLVAALIPPAMNSIRKAKAVQVARNLKNLSIGFENKILVDNVPPLSIDEIGRNIPDNYGV AYEVSNGTWLVVVYYTGKDVDYDTLKTILPDVSQDYVPLSSPTVLSGSPSYSEDPENIYYSYVISIGGGTLEADVEITNI EYAANPEVVHIKNLGTLSVNLLGWKLKDIANHIFTFPNFVLEPGEEVRVYSHVTASSPMPEGENNLKWTGQYVWNNDGDT AYLYDSSGATVTTYSY >Mature_256_residues MLYKKGFTLVELLIVLAIIAVLVAALIPPAMNSIRKAKAVQVARNLKNLSIGFENKILVDNVPPLSIDEIGRNIPDNYGV AYEVSNGTWLVVVYYTGKDVDYDTLKTILPDVSQDYVPLSSPTVLSGSPSYSEDPENIYYSYVISIGGGTLEADVEITNI EYAANPEVVHIKNLGTLSVNLLGWKLKDIANHIFTFPNFVLEPGEEVRVYSHVTASSPMPEGENNLKWTGQYVWNNDGDT AYLYDSSGATVTTYSY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28182; Mature: 28182
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKKGFTLVELLIVLAIIAVLVAALIPPAMNSIRKAKAVQVARNLKNLSIGFENKILVD CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC NVPPLSIDEIGRNIPDNYGVAYEVSNGTWLVVVYYTGKDVDYDTLKTILPDVSQDYVPLS CCCCCCHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCC SPTVLSGSPSYSEDPENIYYSYVISIGGGTLEADVEITNIEYAANPEVVHIKNLGTLSVN CCEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEEECCCCEEEEECCCEEEEE LLGWKLKDIANHIFTFPNFVLEPGEEVRVYSHVTASSPMPEGENNLKWTGQYVWNNDGDT EEEEEHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCE AYLYDSSGATVTTYSY EEEECCCCCEEEEECC >Mature Secondary Structure MLYKKGFTLVELLIVLAIIAVLVAALIPPAMNSIRKAKAVQVARNLKNLSIGFENKILVD CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC NVPPLSIDEIGRNIPDNYGVAYEVSNGTWLVVVYYTGKDVDYDTLKTILPDVSQDYVPLS CCCCCCHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCC SPTVLSGSPSYSEDPENIYYSYVISIGGGTLEADVEITNIEYAANPEVVHIKNLGTLSVN CCEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEEECCCCEEEEECCCEEEEE LLGWKLKDIANHIFTFPNFVLEPGEEVRVYSHVTASSPMPEGENNLKWTGQYVWNNDGDT EEEEEHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCE AYLYDSSGATVTTYSY EEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA