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The map label for this gene is pepF [H]

Identifier: 239616809

GI number: 239616809

Start: 421910

End: 423628

Strand: Reverse

Name: pepF [H]

Synonym: Kole_0402

Alternate gene names: 239616809

Gene position: 423628-421910 (Counterclockwise)

Preceding gene: 239616810

Following gene: 239616808

Centisome position: 18.4

GC content: 39.27

Gene sequence:

>1719_bases
ATGCTTTATACCCAGGAAAAGATAACAAAAAAGCCAAGGAAATATTTTACGGAAGATCTGGATGTTATTGACTGGAAAAT
TGTGGAACGAGAATTTAAAGGTATTCTCGAACAGGAAATTTCTTCAGCAGATGATCTGGTGAAAATGATGGAGAAGTTCA
GCGAGTTGATGAATATCATCGGCGAAGAAAACGCCTGGCGTTATATTAGAATGACACGATTTGCAGACAAAAACGAATAC
AGAGAAGCTTATAACGACTTTCTCTCCAATATTGTGTTGCGATCGGAACCTTACCAAATGAAAATAGCAAAAAGATTCTA
TGAAAGTCCTTATCGTTCTCAACTGGATTCAGAACGTTATGAGAATCTGGACAGAATTATAGCCAATAAGATCGAAATGT
TCAAGGAAGAGAACCTTCCACTTAAAGCCCGGGAAGCGAAATTGGCGAGTAAATACGGTGCTATTATTGGTTCGATAACG
GTTAAATTCAAAGGTGAAGAGAAGACGTTGCAACAGTTGGGGGCTTACCAACTTGATCCAGATAGGAACACACGTGAGAA
TTCCTGGCGGTTACGAATGCAAAAGATCCTTGAGCACAGCGTCGAATTGGACAAACTTTTTGATGACCTCAAAGAAATAC
GTGTCCAGCAGGCTAAAAATGCTGGTTTCGATAACTACCGCGATTACAAACATAAAGAGAAAGGACGATTTGCTTACACT
CCAGATGAACTTTTCGAATTCCATGAATCTGTTGAAAAGGTGGTTGTTCCTTTCGTAACGGAGCTGAATGAAAAGAAAAG
AAATAAACTTAATCTTGATAGTTTAAGGCCGTGGGACACCAGTGTTGATCCTGATGGAAAGGTTTTAAAACCTTTCAAAA
CGATAGATGAATTTGTAGAAAAGGCAATAAGGATACTGTATAAGGTAAAACCAGAGTTTGGTGTTAATTTGAATAAGATG
TGTAATTCGGGACTTCTTGATCTTGAGAATCGTAAGGGAAAAGCTCCAGGTGGATACAATTATTCTTTGGCTGAAACGGG
GGCTCCTTTCATCTTCATGAATGCGGTTGGCACTGAAGATAATGTTAGGACAATCCTTCACGAATCCGGTCATGCTATGC
ATTCGTTTGCAATGGCAAACGAGCCGATACATTTCTACCGTCGACCACCAATGGAGGCTTCGGAATTGGCTTCTATGTCC
ATGGAATTGCTCACTCTCGATCACTGGGACGAGTATTTTCCGAACGAAGAAGAGTACATACATGCAAAAAGAAGAGAACT
TGAGGGAACGGTAAAATTCCTGCCATGGTGCATGATTGTAGATGCTTTTCAGCATTGGATATACACAAATCCTGAACATA
CACCAGAGGAGAGAACGGAATATTTCAAAAAACTCATGGACCGCTTTAACACCGGTGTGGATTGGTCGGATCTAGATAAA
GAAAAAGGTGTTGTCTGGATGCAGCAACTTCATATATTTACATCGCCTTTTTATTACATTGAATATGGTATTGCACAACT
TGGTGCGATTGCCATTTATAGAAATTATCGTAGAAAGGGAAAGAGAGCAATAGAAGATTACGAAAAGTTCTTAAAACTTG
GTTATTCAAAACCTCTTGAAGAACTTTACAAGACCGCAGGAATAAAGTTCGATTTCTCTCAGGATTATATAGGAGAACTG
GTGGAGTTCATAGAAGAAGAATTGAAACAGTTATCCTGA

Upstream 100 bases:

>100_bases
TTCACGGGCTGGATCAAAAATGCGAAGGTGAATTTAGTTTGTTTAGCTTATCAAATGATATAATATTGCGGAAGAATGCC
ATAAAGAATGGGGGATAAGA

Downstream 100 bases:

>100_bases
ATTTCTCATTGATGATCAAAAAAACAAAGCTTTCTTTATCTTCAGATATACTTTAGCCCGGAGAGATTTCTCCGGGCTTG
AATTATTTCGGTACTTTTCA

Product: oligoendopeptidase, M3 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MLYTQEKITKKPRKYFTEDLDVIDWKIVEREFKGILEQEISSADDLVKMMEKFSELMNIIGEENAWRYIRMTRFADKNEY
REAYNDFLSNIVLRSEPYQMKIAKRFYESPYRSQLDSERYENLDRIIANKIEMFKEENLPLKAREAKLASKYGAIIGSIT
VKFKGEEKTLQQLGAYQLDPDRNTRENSWRLRMQKILEHSVELDKLFDDLKEIRVQQAKNAGFDNYRDYKHKEKGRFAYT
PDELFEFHESVEKVVVPFVTELNEKKRNKLNLDSLRPWDTSVDPDGKVLKPFKTIDEFVEKAIRILYKVKPEFGVNLNKM
CNSGLLDLENRKGKAPGGYNYSLAETGAPFIFMNAVGTEDNVRTILHESGHAMHSFAMANEPIHFYRRPPMEASELASMS
MELLTLDHWDEYFPNEEEYIHAKRRELEGTVKFLPWCMIVDAFQHWIYTNPEHTPEERTEYFKKLMDRFNTGVDWSDLDK
EKGVVWMQQLHIFTSPFYYIEYGIAQLGAIAIYRNYRRKGKRAIEDYEKFLKLGYSKPLEELYKTAGIKFDFSQDYIGEL
VEFIEEELKQLS

Sequences:

>Translated_572_residues
MLYTQEKITKKPRKYFTEDLDVIDWKIVEREFKGILEQEISSADDLVKMMEKFSELMNIIGEENAWRYIRMTRFADKNEY
REAYNDFLSNIVLRSEPYQMKIAKRFYESPYRSQLDSERYENLDRIIANKIEMFKEENLPLKAREAKLASKYGAIIGSIT
VKFKGEEKTLQQLGAYQLDPDRNTRENSWRLRMQKILEHSVELDKLFDDLKEIRVQQAKNAGFDNYRDYKHKEKGRFAYT
PDELFEFHESVEKVVVPFVTELNEKKRNKLNLDSLRPWDTSVDPDGKVLKPFKTIDEFVEKAIRILYKVKPEFGVNLNKM
CNSGLLDLENRKGKAPGGYNYSLAETGAPFIFMNAVGTEDNVRTILHESGHAMHSFAMANEPIHFYRRPPMEASELASMS
MELLTLDHWDEYFPNEEEYIHAKRRELEGTVKFLPWCMIVDAFQHWIYTNPEHTPEERTEYFKKLMDRFNTGVDWSDLDK
EKGVVWMQQLHIFTSPFYYIEYGIAQLGAIAIYRNYRRKGKRAIEDYEKFLKLGYSKPLEELYKTAGIKFDFSQDYIGEL
VEFIEEELKQLS
>Mature_572_residues
MLYTQEKITKKPRKYFTEDLDVIDWKIVEREFKGILEQEISSADDLVKMMEKFSELMNIIGEENAWRYIRMTRFADKNEY
REAYNDFLSNIVLRSEPYQMKIAKRFYESPYRSQLDSERYENLDRIIANKIEMFKEENLPLKAREAKLASKYGAIIGSIT
VKFKGEEKTLQQLGAYQLDPDRNTRENSWRLRMQKILEHSVELDKLFDDLKEIRVQQAKNAGFDNYRDYKHKEKGRFAYT
PDELFEFHESVEKVVVPFVTELNEKKRNKLNLDSLRPWDTSVDPDGKVLKPFKTIDEFVEKAIRILYKVKPEFGVNLNKM
CNSGLLDLENRKGKAPGGYNYSLAETGAPFIFMNAVGTEDNVRTILHESGHAMHSFAMANEPIHFYRRPPMEASELASMS
MELLTLDHWDEYFPNEEEYIHAKRRELEGTVKFLPWCMIVDAFQHWIYTNPEHTPEERTEYFKKLMDRFNTGVDWSDLDK
EKGVVWMQQLHIFTSPFYYIEYGIAQLGAIAIYRNYRRKGKRAIEDYEKFLKLGYSKPLEELYKTAGIKFDFSQDYIGEL
VEFIEEELKQLS

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67825; Mature: 67825

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTQEKITKKPRKYFTEDLDVIDWKIVEREFKGILEQEISSADDLVKMMEKFSELMNII
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GEENAWRYIRMTRFADKNEYREAYNDFLSNIVLRSEPYQMKIAKRFYESPYRSQLDSERY
CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
ENLDRIIANKIEMFKEENLPLKAREAKLASKYGAIIGSITVKFKGEEKTLQQLGAYQLDP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCEECCC
DRNTRENSWRLRMQKILEHSVELDKLFDDLKEIRVQQAKNAGFDNYRDYKHKEKGRFAYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
PDELFEFHESVEKVVVPFVTELNEKKRNKLNLDSLRPWDTSVDPDGKVLKPFKTIDEFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KAIRILYKVKPEFGVNLNKMCNSGLLDLENRKGKAPGGYNYSLAETGAPFIFMNAVGTED
HHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCH
NVRTILHESGHAMHSFAMANEPIHFYRRPPMEASELASMSMELLTLDHWDEYFPNEEEYI
HHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HAKRRELEGTVKFLPWCMIVDAFQHWIYTNPEHTPEERTEYFKKLMDRFNTGVDWSDLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCH
EKGVVWMQQLHIFTSPFYYIEYGIAQLGAIAIYRNYRRKGKRAIEDYEKFLKLGYSKPLE
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ELYKTAGIKFDFSQDYIGELVEFIEEELKQLS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYTQEKITKKPRKYFTEDLDVIDWKIVEREFKGILEQEISSADDLVKMMEKFSELMNII
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GEENAWRYIRMTRFADKNEYREAYNDFLSNIVLRSEPYQMKIAKRFYESPYRSQLDSERY
CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
ENLDRIIANKIEMFKEENLPLKAREAKLASKYGAIIGSITVKFKGEEKTLQQLGAYQLDP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCEECCC
DRNTRENSWRLRMQKILEHSVELDKLFDDLKEIRVQQAKNAGFDNYRDYKHKEKGRFAYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
PDELFEFHESVEKVVVPFVTELNEKKRNKLNLDSLRPWDTSVDPDGKVLKPFKTIDEFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KAIRILYKVKPEFGVNLNKMCNSGLLDLENRKGKAPGGYNYSLAETGAPFIFMNAVGTED
HHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCH
NVRTILHESGHAMHSFAMANEPIHFYRRPPMEASELASMSMELLTLDHWDEYFPNEEEYI
HHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HAKRRELEGTVKFLPWCMIVDAFQHWIYTNPEHTPEERTEYFKKLMDRFNTGVDWSDLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCH
EKGVVWMQQLHIFTSPFYYIEYGIAQLGAIAIYRNYRRKGKRAIEDYEKFLKLGYSKPLE
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ELYKTAGIKFDFSQDYIGELVEFIEEELKQLS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]