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The map label for this gene is ugpE [C]

Identifier: 239616708

GI number: 239616708

Start: 327567

End: 328403

Strand: Reverse

Name: ugpE [C]

Synonym: Kole_0301

Alternate gene names: 239616708

Gene position: 328403-327567 (Counterclockwise)

Preceding gene: 239616709

Following gene: 239616707

Centisome position: 14.27

GC content: 41.46

Gene sequence:

>837_bases
ATGAGAAAAAAAATACAATTCAGGGAGATTTCTCTTAACATCACCGCCTGGATTATTGGGTTAATCTGGATCCTTCCAAT
CGTTGGAATTCTTATGACTGCGATCCGCCCTTTTGATGAAGTAATAAACGGATGGTGGAGATTCGATACATTTACCCCGA
CCTTCTCAAATTTTTTTGACGCATTAAATCACCCAACAGCACCACTTATAAATGGTATGAAAAATTCGTTGATAGTTGCA
ATCCCGGCAACATTTTTACCTCTCATAATCGCAACCATGACGGGATACGGATTGTCGCGTTATCATTTTCCTATGAGAAA
AGCGTTTATTATTACCGTGGTTCTAACGCTCGCACTGCCCCAGCAGATGATAGCTGTGCCCATATTTCAGATAATGAGTA
CGCTCGGTCTGGTGGATAGCTATCTTGGACTGATTCTTGTACATACAGCGTGGGGGATACCCTGGATAACGTTCTTTATG
CGCAATTATTTCAAAACATTACCTTTTTCCATTGAAGAAGCAGCCCGGATTGATGGAGCGAGTGACTTCCAGATTTTTTA
CAAAATAGTTTTCCCTAATGCTCTACCGGCTATTGCCTCTGCTTCAGCGCTTCAGTTCACATGGGTCTGGAGTGATTTCT
TCCTGGCATTGATTCTGATCTATTCACCTAACAAACTTCTCGCAACCCAGAGAATACCCCTTATGAGAGGTGTTTATCAC
GTTGACTGGGGGCTCTTGTCAGCAGCATCTATACTTGTTATGATTATTCCGATCTTGATTTATCTTCTTTTGCAGAGATA
TTATGTTAAAGGGATGGTCGGTTGGACCATAAAATGA

Upstream 100 bases:

>100_bases
AGTGGGACTTCGGGAAGGCCGCAGTTGTTGCCGTGCTTATAACACTGTCGACTCTTGTTGCAGCTATACCTATGATAAGT
TCAGCGGGAGATGATGCGTT

Downstream 100 bases:

>100_bases
GTAAGACTTGAACTGGGGGAATCAGTGTGAAAATCGAAGAGATTCGTTGGGACAATCTTACAAAATTGCTGGACTTTCTT
TACGCTGGCAAGCGTGTTTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRKKIQFREISLNITAWIIGLIWILPIVGILMTAIRPFDEVINGWWRFDTFTPTFSNFFDALNHPTAPLINGMKNSLIVA
IPATFLPLIIATMTGYGLSRYHFPMRKAFIITVVLTLALPQQMIAVPIFQIMSTLGLVDSYLGLILVHTAWGIPWITFFM
RNYFKTLPFSIEEAARIDGASDFQIFYKIVFPNALPAIASASALQFTWVWSDFFLALILIYSPNKLLATQRIPLMRGVYH
VDWGLLSAASILVMIIPILIYLLLQRYYVKGMVGWTIK

Sequences:

>Translated_278_residues
MRKKIQFREISLNITAWIIGLIWILPIVGILMTAIRPFDEVINGWWRFDTFTPTFSNFFDALNHPTAPLINGMKNSLIVA
IPATFLPLIIATMTGYGLSRYHFPMRKAFIITVVLTLALPQQMIAVPIFQIMSTLGLVDSYLGLILVHTAWGIPWITFFM
RNYFKTLPFSIEEAARIDGASDFQIFYKIVFPNALPAIASASALQFTWVWSDFFLALILIYSPNKLLATQRIPLMRGVYH
VDWGLLSAASILVMIIPILIYLLLQRYYVKGMVGWTIK
>Mature_278_residues
MRKKIQFREISLNITAWIIGLIWILPIVGILMTAIRPFDEVINGWWRFDTFTPTFSNFFDALNHPTAPLINGMKNSLIVA
IPATFLPLIIATMTGYGLSRYHFPMRKAFIITVVLTLALPQQMIAVPIFQIMSTLGLVDSYLGLILVHTAWGIPWITFFM
RNYFKTLPFSIEEAARIDGASDFQIFYKIVFPNALPAIASASALQFTWVWSDFFLALILIYSPNKLLATQRIPLMRGVYH
VDWGLLSAASILVMIIPILIYLLLQRYYVKGMVGWTIK

Specific function: Probably part of a binding-protein-dependent transport system PH1036/38/39. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=216, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=25.6704980842912, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790464, Length=219, Percent_Identity=23.2876712328767, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31714; Mature: 31714

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIQFREISLNITAWIIGLIWILPIVGILMTAIRPFDEVINGWWRFDTFTPTFSNFFD
CCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
ALNHPTAPLINGMKNSLIVAIPATFLPLIIATMTGYGLSRYHFPMRKAFIITVVLTLALP
HHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH
QQMIAVPIFQIMSTLGLVDSYLGLILVHTAWGIPWITFFMRNYFKTLPFSIEEAARIDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC
SDFQIFYKIVFPNALPAIASASALQFTWVWSDFFLALILIYSPNKLLATQRIPLMRGVYH
CHHHHHHHHHCCCHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH
VDWGLLSAASILVMIIPILIYLLLQRYYVKGMVGWTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRKKIQFREISLNITAWIIGLIWILPIVGILMTAIRPFDEVINGWWRFDTFTPTFSNFFD
CCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHH
ALNHPTAPLINGMKNSLIVAIPATFLPLIIATMTGYGLSRYHFPMRKAFIITVVLTLALP
HHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH
QQMIAVPIFQIMSTLGLVDSYLGLILVHTAWGIPWITFFMRNYFKTLPFSIEEAARIDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC
SDFQIFYKIVFPNALPAIASASALQFTWVWSDFFLALILIYSPNKLLATQRIPLMRGVYH
CHHHHHHHHHCCCHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH
VDWGLLSAASILVMIIPILIYLLLQRYYVKGMVGWTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]