| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616654
Identifier: 239616654
GI number: 239616654
Start: 274640
End: 276706
Strand: Reverse
Name: 239616654
Synonym: Kole_0247
Alternate gene names: NA
Gene position: 276706-274640 (Counterclockwise)
Preceding gene: 239616655
Following gene: 239616651
Centisome position: 12.02
GC content: 38.99
Gene sequence:
>2067_bases ATGAAGCGTTCCAACAAAGGTAGATTGTTTGTGGCGTTACTGACATTTTTGTATCTCTTCATCGCGTTCATGATTTTCTT ACTCTCACCGACCACAGCTATTGTGGTTCTTGCAACTCTGGTTATTGTGTTTATAGTAGTTACCTGGGCAAAATTTGCAA CAACGAAGCTCAAAATCAAAAGAGCGTTAGCTCTTATCATCGGATTGCTGAGTGTCTTTTTAACGATAATTATGATAATG TTCTTTATTGTTCCACTTGTCTTGAAACAGGTCCCAAATTTTTACAACCTCGTTCTTGATTTCTTCCCTTCCGATGATAA AACAATATCCACTGGATATGTCGGCACCACCTTGTGGGTGCTGGAAGTGGGTAACCGAGACAGAGTTATCGAATCGCAAT ATAGAATCATTCTCGACAGGATGGGCGCAAGCAAAGAGCAAATGATCAAGGAGATAGAGGATTACCTTTTAGCGGCTTCT TCGGTAAAGAGAAATCCAAATTACCTTGAATTGCAGCTCAGAAGTGCGACAGAAAAACTGAAAGAGTATTTTGAAGAAGT CCCTACATCACCAGATATAAAGAAAGTGGAAATTTACGGAGCGCTTGTATCATCAGACGAAAGGATATTCAGAACAAAAC TTGAAAATAAAATAAAAGAATGCATTTCTCCAGAGACAGTTGCAGTTGCCATAGCACATGATATAGCAGCACGCTTGTCA GAAGAAATATCACAACAAGGTAATCTTCGAGACAGCAACATATACGTTCCTTTTACGATTCAGAGCCGAAATGCCTTGCT CAAAATAATAAACAAATACTCTTATGAATTCAATCCGGACAAAACATTTTCAGAATTCATATCGGAGATAAAACAGATAG TAGATGAAGAAATAAATACTCGTTACTTACTTATGATTCCGCTTCCTGACGGGGAACCGGAAAAAATCAGGGAATTTATA GAAAAAGAACTTGTTTCTGTTTTTCCTCCGGGTTTATTCCGTGTCAAAATTTATTCTCCCGGAGCAAACGATGTGAATTC ACTGAAAGCTTATTACATGACCGAAAAAGAGCGCAGCGAGCTACAACGTTATACGGTTAATTTTCCGGATCTGGAAAGGG CCTACATCGTTATAATGGAAGAACCGAATCTACGAGATGGAATAAAAAGACGTGTTGAAGAAATACTCGAAACTTATAAA CCAATAGGATTGAGCAAAGAAGAGGAAAAGTATTTCCAGCGATTTACCAGGGACTTTGCAACCAATCTGGCAAGCAACTT CGAGAGTTATGATGGCAATTGGCTTGCTTATACAAACGAATTGCTTGATTGGTTCAACGTAAAAAGAGAAACGAAGGCAT CTATTCTTTTGACCACCAGGACTTTTCTTTTAGAACTCAAAGTGAAGCTGAGGGATTATACGAATTCAATGCTAGAAAAA ATTCCCAACATCGCTTCTGAAACCTTTACGATAGTGTTTTTTGTGGTAATCGGTTCGATATACACGAGTTTTTACTTTGC CTTTTTCAAAAGGCTTGCTCCAAAACTCTATCCACGGCAGTATAGAAGAATTGCGGCAAACTTTTTAAGGGAACTTCATG GAAACATGAAACGCTACATACTTTCCATACTGTTTATAGCTCTTATAGTGGGTATAACCGTTGGACTCCTGATAAAGTTT CTCGGGCTTGGTTATAGCCTTTTGATTGGATTTTGGGCTGCGATTACCAATCTTGTTCCCGTTGTTGGTGTTATATTTGA AATAGTTCCCATCATTCTCCTGATAGCAGCCCAACCAAGTCTTTCAGGATTGATAATCTTTGTGATTGCTCTTATAGCGA TCCATTCAGCAGCTTTCATCATATTCTTGAAACTCATGGGTGATTACAATAGAGTTAACCCCGTAATGGTTATCCTCCTT GTCCTGTTCATGGGACAGTTGCTGGGAATATTGGGTGCATTTCTTGCTGCACCGGTAGCCATACTTCTCAAACAACTGTG GAAACATTTTTTTGAACCGTGGCTTGAATCAGAAAACTCAGTAAATGAAGCAAGCATCGCCGAATGA
Upstream 100 bases:
>100_bases AAAAAGCTCGAATTAAATTAATGGTAGTAATGGGGTTGACCGATGATCTAACGAAAATTGCTGAATATTTTCAGCATAGT TGAAAGGAGAATGCTCGCGT
Downstream 100 bases:
>100_bases GAAAAAGCGGTAACGAAGCTTTATAGCTTCATTATAGGCTTTTAGTATTTTTTCGCGTCCAGTAAAAGCTGCCACGAGCA TTAAAAGCGTGGACTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIKRALALIIGLLSVFLTIIMIM FFIVPLVLKQVPNFYNLVLDFFPSDDKTISTGYVGTTLWVLEVGNRDRVIESQYRIILDRMGASKEQMIKEIEDYLLAAS SVKRNPNYLELQLRSATEKLKEYFEEVPTSPDIKKVEIYGALVSSDERIFRTKLENKIKECISPETVAVAIAHDIAARLS EEISQQGNLRDSNIYVPFTIQSRNALLKIINKYSYEFNPDKTFSEFISEIKQIVDEEINTRYLLMIPLPDGEPEKIREFI EKELVSVFPPGLFRVKIYSPGANDVNSLKAYYMTEKERSELQRYTVNFPDLERAYIVIMEEPNLRDGIKRRVEEILETYK PIGLSKEEEKYFQRFTRDFATNLASNFESYDGNWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEK IPNIASETFTIVFFVVIGSIYTSFYFAFFKRLAPKLYPRQYRRIAANFLRELHGNMKRYILSILFIALIVGITVGLLIKF LGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPSLSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILL VLFMGQLLGILGAFLAAPVAILLKQLWKHFFEPWLESENSVNEASIAE
Sequences:
>Translated_688_residues MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIKRALALIIGLLSVFLTIIMIM FFIVPLVLKQVPNFYNLVLDFFPSDDKTISTGYVGTTLWVLEVGNRDRVIESQYRIILDRMGASKEQMIKEIEDYLLAAS SVKRNPNYLELQLRSATEKLKEYFEEVPTSPDIKKVEIYGALVSSDERIFRTKLENKIKECISPETVAVAIAHDIAARLS EEISQQGNLRDSNIYVPFTIQSRNALLKIINKYSYEFNPDKTFSEFISEIKQIVDEEINTRYLLMIPLPDGEPEKIREFI EKELVSVFPPGLFRVKIYSPGANDVNSLKAYYMTEKERSELQRYTVNFPDLERAYIVIMEEPNLRDGIKRRVEEILETYK PIGLSKEEEKYFQRFTRDFATNLASNFESYDGNWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEK IPNIASETFTIVFFVVIGSIYTSFYFAFFKRLAPKLYPRQYRRIAANFLRELHGNMKRYILSILFIALIVGITVGLLIKF LGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPSLSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILL VLFMGQLLGILGAFLAAPVAILLKQLWKHFFEPWLESENSVNEASIAE >Mature_688_residues MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIKRALALIIGLLSVFLTIIMIM FFIVPLVLKQVPNFYNLVLDFFPSDDKTISTGYVGTTLWVLEVGNRDRVIESQYRIILDRMGASKEQMIKEIEDYLLAAS SVKRNPNYLELQLRSATEKLKEYFEEVPTSPDIKKVEIYGALVSSDERIFRTKLENKIKECISPETVAVAIAHDIAARLS EEISQQGNLRDSNIYVPFTIQSRNALLKIINKYSYEFNPDKTFSEFISEIKQIVDEEINTRYLLMIPLPDGEPEKIREFI EKELVSVFPPGLFRVKIYSPGANDVNSLKAYYMTEKERSELQRYTVNFPDLERAYIVIMEEPNLRDGIKRRVEEILETYK PIGLSKEEEKYFQRFTRDFATNLASNFESYDGNWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEK IPNIASETFTIVFFVVIGSIYTSFYFAFFKRLAPKLYPRQYRRIAANFLRELHGNMKRYILSILFIALIVGITVGLLIKF LGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPSLSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILL VLFMGQLLGILGAFLAAPVAILLKQLWKHFFEPWLESENSVNEASIAE
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 78974; Mature: 78974
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALALIIGLLSVFLTIIMIMFFIVPLVLKQVPNFYNLVLDFFPSDDKTISTGYVGTTLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCHHEEEE LEVGNRDRVIESQYRIILDRMGASKEQMIKEIEDYLLAASSVKRNPNYLELQLRSATEKL EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH KEYFEEVPTSPDIKKVEIYGALVSSDERIFRTKLENKIKECISPETVAVAIAHDIAARLS HHHHHHCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EEISQQGNLRDSNIYVPFTIQSRNALLKIINKYSYEFNPDKTFSEFISEIKQIVDEEINT HHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC RYLLMIPLPDGEPEKIREFIEKELVSVFPPGLFRVKIYSPGANDVNSLKAYYMTEKERSE EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCHHHHHH LQRYTVNFPDLERAYIVIMEEPNLRDGIKRRVEEILETYKPIGLSKEEEKYFQRFTRDFA HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TNLASNFESYDGNWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEK HHHHHCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPNIASETFTIVFFVVIGSIYTSFYFAFFKRLAPKLYPRQYRRIAANFLRELHGNMKRYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LSILFIALIVGITVGLLIKFLGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILLVLFMGQLLGILGAFLAAPVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLKQLWKHFFEPWLESENSVNEASIAE HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALALIIGLLSVFLTIIMIMFFIVPLVLKQVPNFYNLVLDFFPSDDKTISTGYVGTTLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCHHEEEE LEVGNRDRVIESQYRIILDRMGASKEQMIKEIEDYLLAASSVKRNPNYLELQLRSATEKL EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH KEYFEEVPTSPDIKKVEIYGALVSSDERIFRTKLENKIKECISPETVAVAIAHDIAARLS HHHHHHCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EEISQQGNLRDSNIYVPFTIQSRNALLKIINKYSYEFNPDKTFSEFISEIKQIVDEEINT HHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC RYLLMIPLPDGEPEKIREFIEKELVSVFPPGLFRVKIYSPGANDVNSLKAYYMTEKERSE EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCHHHHHH LQRYTVNFPDLERAYIVIMEEPNLRDGIKRRVEEILETYKPIGLSKEEEKYFQRFTRDFA HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TNLASNFESYDGNWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEK HHHHHCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPNIASETFTIVFFVVIGSIYTSFYFAFFKRLAPKLYPRQYRRIAANFLRELHGNMKRYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LSILFIALIVGITVGLLIKFLGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILLVLFMGQLLGILGAFLAAPVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLKQLWKHFFEPWLESENSVNEASIAE HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]