| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is leuS [H]
Identifier: 239616581
GI number: 239616581
Start: 194262
End: 196637
Strand: Reverse
Name: leuS [H]
Synonym: Kole_0173
Alternate gene names: 239616581
Gene position: 196637-194262 (Counterclockwise)
Preceding gene: 239616582
Following gene: 239616580
Centisome position: 8.54
GC content: 44.7
Gene sequence:
>2376_bases ATGTACGATTTCAAGTCGATAGAAAAGAAGTGGCAAAAGTATTATGAGGAAGAAGAGCCTTTCAAGGTTGATTTGAAAAA CGCGAAAAAACCCTTTTACAACCTCATGATGTTTCCGTATCCTTCGGCTTCCGGGTTACATATAGGGAATATGTATTCTT TTATAGGTTCAGACGTTTACGGGCGTTATAAAAAGCTTCAGGGCTACGATGTTTTTGAACCAATAGGATTTGATGCTTTT GGTATCCACAGTGAAAATTACGCTCTAAAAGTTGGCGAGCACCCTGCAAAGCTCACACCCAAAAGTATCAAATACTTCAG GGATGAGCAGCTGAAAAAGATCGGGAATATCTATGACTGGAGCAGTGAAGTCAACACCTCTTCACCCGAATATTACAAGT GGACCCAGTGGATATTCCTTCAACTCTACAAAGCCGGGCTCGCAGAGAAGAAAAACTCCGAGGTCAACTGGTGCCCTTCG TGTAAGACGGTTCTCGCCGACGAACAGGTTATAGACGGAAAATGTGAACGTTGTAGCACTGAAATAACGAAGCGGGAGAT GAGCCAGTGGTTCTTCAAGATCACAAAATACGCTGACCGCCTCCTTGAAAACCTGGAAAAACTCGATTGGACCGAAACCA CAAAGAATATCCAGCGTAGCTGGATTGGGAGATCTGAAGGGGCAAAGATCCGTTTCCCGGTTGAGAATTCCGATATTGAG ATAGAGGTATTCACCACGAGGCCAGACACGATCTATGGTGTTACTTACCTTACTTTAGCTCCGGAACACAAGTTGGTTAA AAAACTCATAAAAGAAGATAAATTTTCGCAGTTTGAAGAATTCCTTGAGAGCGTTAAGAAGATGGACGTCGCTACCAGAA CGTCCAAGACGCGCCCTAAAACTGGTATGTTCACGGGAAGTTATGCTATTCACCCGCTCACTGGTGAAAGAATTCCTATC TGGGTTGGTGACTACGTGCTTGTGGAATACGGTACCGGTGCGGTAATGGCTGTTCCCGCACATGATGAGAGGGACTACGC TTTTGCGAAAAAATACGGGCTCGAAATCAAGCAGGTTATCGAGTGTGATCCTGAGGATTTGCCCTACACTGAGAAGGGGA TAATGATAAACAGCGGTCCATATACAGGCTGGAAGAGCGAGGATTTTATCGCCAATATAGACAGTGTGCACGAGAAGATA GAATCGGCCGTCACCTATCACCTTCACGATTGGTGTGTCTCAAGGCAGAGATACTGGGGACCACCAATCCCAATAATATA CTGTGATAAATGTGGTATCGTTCCTGTTCCTGAAGAGGATCTGCCTGTTTTGCTTCCCGAAACGGACGACTATATCCCGG ATGGCAGCGGAAAGTCCCCTCTGGCGAGGAATGAGGAGTTCGTCAATACCACCTGTCCTAAATGTGGTGGTCCGGCTAAA AGAGAGACAGATGTCAGCGATAATTTCCTTGACTCGGCATGGTATTTCTTGAGGTATATATCACCACACGATCAGGATAG ACCTTTCGATCCTGAGCTGGCTAAAAAATGGCTTCCGGTGGATATGTACATCGGAGGTAACGAACATGCAAACCTACATC TAATGTACGCGCGATTCATTACCATGGCACTTCATGATCTCGGAATTCTCCACTTTGAAGAGCCATTCAAATCCTTCAGG GGCCACGGTCTGATAATCAAAGATGGGGAGAAAATGAGCAAATCAAAGGGAAACATCGTCAACCCAAACGACTATTTCGA TACCCACGGTGTTGATGCGCTAAGAACTTACCTTATGTTTATGGGAAGCTTCCTTGAAGGCGGTGACTTCAGGGACAGCG GAATGGATGCCATCAAACGTTTCCTCAACAGGGTATGGGAGGTTGCCAACAAACCCGAGGGTGAAAGTTCTCTCCAGCTA AAGATCAAGATGGCAGAGACCATTAAAAAGGTGGAGTATTCGATTGAAAATATCAAGTACAATACGGCTATCGCTGCCAT TATGGAATTTATAAATGAGGCTGTTAAAGAAGAACGCATAGAAAGGCAGCTGGTTGTGGATCTGGCAAAACTCCTTGCTC CTTTTGCACCCTTCATTTGTGAGGAAATACACGAAATGAAGGGCGGCAAAGGAACTATATTGAATGCCGGATGGCCCACA GGATATGACAAGTACCTTTCTATGGCGGATGTGGAGATTCCGGTGCAGATAAACGGTAAGATGCGTGGAAAAGTAAAAAT TCATCAGAAAGCTTCGGAAGATGAGGTTATAGAGAAGATAAAAGGCGATGAAAGGCTTGCGCACTACCTCAATAAAGGAG AGATACGAAAGGTTATATACGTCCAGGACAAAATAATTAACATTATTGTGAAGTAA
Upstream 100 bases:
>100_bases CGTATCTGTGGTGGAAAAAAGTGCGAGCTGTGCTATAATTTTGAAAACTGCTCTCGGTCGGAAATCTATTATTTGACCAG CTTAGGGAGGGGTACGAAGT
Downstream 100 bases:
>100_bases TAACAGGAAGTTGTGGGGGAGGTTCTACCGAACCTCCCTTCTTAGTTTGGAGAAAATTTTAACTTTATACATTGTAACTT CATAGAATGATATGGTAGAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MYDFKSIEKKWQKYYEEEEPFKVDLKNAKKPFYNLMMFPYPSASGLHIGNMYSFIGSDVYGRYKKLQGYDVFEPIGFDAF GIHSENYALKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDWSSEVNTSSPEYYKWTQWIFLQLYKAGLAEKKNSEVNWCPS CKTVLADEQVIDGKCERCSTEITKREMSQWFFKITKYADRLLENLEKLDWTETTKNIQRSWIGRSEGAKIRFPVENSDIE IEVFTTRPDTIYGVTYLTLAPEHKLVKKLIKEDKFSQFEEFLESVKKMDVATRTSKTRPKTGMFTGSYAIHPLTGERIPI WVGDYVLVEYGTGAVMAVPAHDERDYAFAKKYGLEIKQVIECDPEDLPYTEKGIMINSGPYTGWKSEDFIANIDSVHEKI ESAVTYHLHDWCVSRQRYWGPPIPIIYCDKCGIVPVPEEDLPVLLPETDDYIPDGSGKSPLARNEEFVNTTCPKCGGPAK RETDVSDNFLDSAWYFLRYISPHDQDRPFDPELAKKWLPVDMYIGGNEHANLHLMYARFITMALHDLGILHFEEPFKSFR GHGLIIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLMFMGSFLEGGDFRDSGMDAIKRFLNRVWEVANKPEGESSLQL KIKMAETIKKVEYSIENIKYNTAIAAIMEFINEAVKEERIERQLVVDLAKLLAPFAPFICEEIHEMKGGKGTILNAGWPT GYDKYLSMADVEIPVQINGKMRGKVKIHQKASEDEVIEKIKGDERLAHYLNKGEIRKVIYVQDKIINIIVK
Sequences:
>Translated_791_residues MYDFKSIEKKWQKYYEEEEPFKVDLKNAKKPFYNLMMFPYPSASGLHIGNMYSFIGSDVYGRYKKLQGYDVFEPIGFDAF GIHSENYALKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDWSSEVNTSSPEYYKWTQWIFLQLYKAGLAEKKNSEVNWCPS CKTVLADEQVIDGKCERCSTEITKREMSQWFFKITKYADRLLENLEKLDWTETTKNIQRSWIGRSEGAKIRFPVENSDIE IEVFTTRPDTIYGVTYLTLAPEHKLVKKLIKEDKFSQFEEFLESVKKMDVATRTSKTRPKTGMFTGSYAIHPLTGERIPI WVGDYVLVEYGTGAVMAVPAHDERDYAFAKKYGLEIKQVIECDPEDLPYTEKGIMINSGPYTGWKSEDFIANIDSVHEKI ESAVTYHLHDWCVSRQRYWGPPIPIIYCDKCGIVPVPEEDLPVLLPETDDYIPDGSGKSPLARNEEFVNTTCPKCGGPAK RETDVSDNFLDSAWYFLRYISPHDQDRPFDPELAKKWLPVDMYIGGNEHANLHLMYARFITMALHDLGILHFEEPFKSFR GHGLIIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLMFMGSFLEGGDFRDSGMDAIKRFLNRVWEVANKPEGESSLQL KIKMAETIKKVEYSIENIKYNTAIAAIMEFINEAVKEERIERQLVVDLAKLLAPFAPFICEEIHEMKGGKGTILNAGWPT GYDKYLSMADVEIPVQINGKMRGKVKIHQKASEDEVIEKIKGDERLAHYLNKGEIRKVIYVQDKIINIIVK >Mature_791_residues MYDFKSIEKKWQKYYEEEEPFKVDLKNAKKPFYNLMMFPYPSASGLHIGNMYSFIGSDVYGRYKKLQGYDVFEPIGFDAF GIHSENYALKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDWSSEVNTSSPEYYKWTQWIFLQLYKAGLAEKKNSEVNWCPS CKTVLADEQVIDGKCERCSTEITKREMSQWFFKITKYADRLLENLEKLDWTETTKNIQRSWIGRSEGAKIRFPVENSDIE IEVFTTRPDTIYGVTYLTLAPEHKLVKKLIKEDKFSQFEEFLESVKKMDVATRTSKTRPKTGMFTGSYAIHPLTGERIPI WVGDYVLVEYGTGAVMAVPAHDERDYAFAKKYGLEIKQVIECDPEDLPYTEKGIMINSGPYTGWKSEDFIANIDSVHEKI ESAVTYHLHDWCVSRQRYWGPPIPIIYCDKCGIVPVPEEDLPVLLPETDDYIPDGSGKSPLARNEEFVNTTCPKCGGPAK RETDVSDNFLDSAWYFLRYISPHDQDRPFDPELAKKWLPVDMYIGGNEHANLHLMYARFITMALHDLGILHFEEPFKSFR GHGLIIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLMFMGSFLEGGDFRDSGMDAIKRFLNRVWEVANKPEGESSLQL KIKMAETIKKVEYSIENIKYNTAIAAIMEFINEAVKEERIERQLVVDLAKLLAPFAPFICEEIHEMKGGKGTILNAGWPT GYDKYLSMADVEIPVQINGKMRGKVKIHQKASEDEVIEKIKGDERLAHYLNKGEIRKVIYVQDKIINIIVK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=873, Percent_Identity=31.1569301260023, Blast_Score=422, Evalue=1e-118, Organism=Escherichia coli, GI1786861, Length=867, Percent_Identity=39.3310265282584, Blast_Score=613, Evalue=1e-176, Organism=Caenorhabditis elegans, GI71997510, Length=822, Percent_Identity=28.8321167883212, Blast_Score=285, Evalue=7e-77, Organism=Caenorhabditis elegans, GI71997517, Length=820, Percent_Identity=28.780487804878, Blast_Score=284, Evalue=1e-76, Organism=Caenorhabditis elegans, GI212645227, Length=336, Percent_Identity=25.5952380952381, Blast_Score=100, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323414, Length=877, Percent_Identity=33.6374002280502, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI21355409, Length=887, Percent_Identity=29.6505073280722, Blast_Score=350, Evalue=3e-96,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 91149; Mature: 91149
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDFKSIEKKWQKYYEEEEPFKVDLKNAKKPFYNLMMFPYPSASGLHIGNMYSFIGSDVY CCCHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHEEEEECCCCCCCCCHHHHHHHHCCHHH GRYKKLQGYDVFEPIGFDAFGIHSENYALKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDW HHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC SSEVNTSSPEYYKWTQWIFLQLYKAGLAEKKNSEVNWCPSCKTVLADEQVIDGKCERCST CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHCCHHHHHHH EITKREMSQWFFKITKYADRLLENLEKLDWTETTKNIQRSWIGRSEGAKIRFPVENSDIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEE IEVFTTRPDTIYGVTYLTLAPEHKLVKKLIKEDKFSQFEEFLESVKKMDVATRTSKTRPK EEEEECCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC TGMFTGSYAIHPLTGERIPIWVGDYVLVEYGTGAVMAVPAHDERDYAFAKKYGLEIKQVI CCEEECCEEEECCCCCEEEEEECCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHH ECDPEDLPYTEKGIMINSGPYTGWKSEDFIANIDSVHEKIESAVTYHLHDWCVSRQRYWG CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC PPIPIIYCDKCGIVPVPEEDLPVLLPETDDYIPDGSGKSPLARNEEFVNTTCPKCGGPAK CCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC RETDVSDNFLDSAWYFLRYISPHDQDRPFDPELAKKWLPVDMYIGGNEHANLHLMYARFI CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCEEEHHHHHH TMALHDLGILHFEEPFKSFRGHGLIIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLMF HHHHHHHCHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH MGSFLEGGDFRDSGMDAIKRFLNRVWEVANKPEGESSLQLKIKMAETIKKVEYSIENIKY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEH NTAIAAIMEFINEAVKEERIERQLVVDLAKLLAPFAPFICEEIHEMKGGKGTILNAGWPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GYDKYLSMADVEIPVQINGKMRGKVKIHQKASEDEVIEKIKGDERLAHYLNKGEIRKVIY CHHHHHHHCCEEEEEEECCCEECEEEEECCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEE VQDKIINIIVK EECCCEEEECC >Mature Secondary Structure MYDFKSIEKKWQKYYEEEEPFKVDLKNAKKPFYNLMMFPYPSASGLHIGNMYSFIGSDVY CCCHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHEEEEECCCCCCCCCHHHHHHHHCCHHH GRYKKLQGYDVFEPIGFDAFGIHSENYALKVGEHPAKLTPKSIKYFRDEQLKKIGNIYDW HHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC SSEVNTSSPEYYKWTQWIFLQLYKAGLAEKKNSEVNWCPSCKTVLADEQVIDGKCERCST CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHCCHHHHHHH EITKREMSQWFFKITKYADRLLENLEKLDWTETTKNIQRSWIGRSEGAKIRFPVENSDIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEE IEVFTTRPDTIYGVTYLTLAPEHKLVKKLIKEDKFSQFEEFLESVKKMDVATRTSKTRPK EEEEECCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC TGMFTGSYAIHPLTGERIPIWVGDYVLVEYGTGAVMAVPAHDERDYAFAKKYGLEIKQVI CCEEECCEEEECCCCCEEEEEECCEEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHH ECDPEDLPYTEKGIMINSGPYTGWKSEDFIANIDSVHEKIESAVTYHLHDWCVSRQRYWG CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC PPIPIIYCDKCGIVPVPEEDLPVLLPETDDYIPDGSGKSPLARNEEFVNTTCPKCGGPAK CCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC RETDVSDNFLDSAWYFLRYISPHDQDRPFDPELAKKWLPVDMYIGGNEHANLHLMYARFI CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCEEEHHHHHH TMALHDLGILHFEEPFKSFRGHGLIIKDGEKMSKSKGNIVNPNDYFDTHGVDALRTYLMF HHHHHHHCHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH MGSFLEGGDFRDSGMDAIKRFLNRVWEVANKPEGESSLQLKIKMAETIKKVEYSIENIKY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEH NTAIAAIMEFINEAVKEERIERQLVVDLAKLLAPFAPFICEEIHEMKGGKGTILNAGWPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GYDKYLSMADVEIPVQINGKMRGKVKIHQKASEDEVIEKIKGDERLAHYLNKGEIRKVIY CHHHHHHHCCEEEEEEECCCEECEEEEECCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEE VQDKIINIIVK EECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]