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The map label for this gene is 239616547

Identifier: 239616547

GI number: 239616547

Start: 157229

End: 157525

Strand: Reverse

Name: 239616547

Synonym: Kole_0139

Alternate gene names: NA

Gene position: 157525-157229 (Counterclockwise)

Preceding gene: 239616548

Following gene: 239616546

Centisome position: 6.84

GC content: 36.03

Gene sequence:

>297_bases
ATGAATCCAGGTTTCGTTTACATAATGTCAAACCCTGGTAGAACAACCTTCTATATAGGAGTAACGAACAATCTCCTGCG
TAGAGTTAAGGAACATAAAAGCAAGAAAATTGAAGGTTTTGCTTCTAAGTACAATTGTGTTGATATTGTGTATTATGAAT
CCTTCGAACAAATCTCCAGCGCAATCGAAAGAGAGAAGCAACTAAAAACATGGAAAAGGCAGTGGAAAATCGCTTTGATA
GAAAAGGTTAATCCAGAAATGCGTGATCTTTATGAAGATATACTATGTGGATCCTGA

Upstream 100 bases:

>100_bases
CTGTTTTTTTGTTACGTGACCGCCTGTGGTTAAAAAAGTAGTGTAAAATTTCAGACGCAGCGTTGTTTAATTTAGCATTT
GCATAAGTGAAGGTGATTTT

Downstream 100 bases:

>100_bases
ATCAAGTTCAGGATGACGGGTTAGGGGTGTTCTGGTTGGATAGTAATGTAGGGGAACAGCATGCTCGAAACTCGAGAACC
GATGTAGGAGTAAAATAAAG

Product: Excinuclease ABC C subunit domain protein

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNPGFVYIMSNPGRTTFYIGVTNNLLRRVKEHKSKKIEGFASKYNCVDIVYYESFEQISSAIEREKQLKTWKRQWKIALI
EKVNPEMRDLYEDILCGS

Sequences:

>Translated_98_residues
MNPGFVYIMSNPGRTTFYIGVTNNLLRRVKEHKSKKIEGFASKYNCVDIVYYESFEQISSAIEREKQLKTWKRQWKIALI
EKVNPEMRDLYEDILCGS
>Mature_98_residues
MNPGFVYIMSNPGRTTFYIGVTNNLLRRVKEHKSKKIEGFASKYNCVDIVYYESFEQISSAIEREKQLKTWKRQWKIALI
EKVNPEMRDLYEDILCGS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11587; Mature: 11587

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGFVYIMSNPGRTTFYIGVTNNLLRRVKEHKSKKIEGFASKYNCVDIVYYESFEQISS
CCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AIEREKQLKTWKRQWKIALIEKVNPEMRDLYEDILCGS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPGFVYIMSNPGRTTFYIGVTNNLLRRVKEHKSKKIEGFASKYNCVDIVYYESFEQISS
CCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AIEREKQLKTWKRQWKIALIEKVNPEMRDLYEDILCGS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA