| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is kch [C]
Identifier: 239616540
GI number: 239616540
Start: 146904
End: 147950
Strand: Reverse
Name: kch [C]
Synonym: Kole_0132
Alternate gene names: 239616540
Gene position: 147950-146904 (Counterclockwise)
Preceding gene: 239616546
Following gene: 239616539
Centisome position: 6.43
GC content: 43.74
Gene sequence:
>1047_bases ATGGAAGAAATTTCAACGAAACACCGGGTAATCTTACGTTCAATATTTATGATAATCGGTGTTATTCTATTTGGGACCTT TGGTTATGGAGTGATCGAGGATTGGTCATTCCTCGATTCTTTCTTTATGACAGTAATAACCATATCTACCGTAGGGTACG GTACTCCAGGAGACCTTTCAGAAGCTGGAAAAATATTTACCAGCTTTTTGATACTCTCCAGTGTAACGGTCGTTGTTTAC GGATTCTCGAATATCACGGCTTTTGTTGTTGAGGGAAGGGTTAATGAATTTCTCAGGAGGCGAAGGATCTTGAAAGCGAT AGAAAAGCTCACAGGGCATTGCATAGTTATCGGAGCTGGAACGGTCGGACTTACCGTCGCGAAGGAGCTAGCGAGAAAAG GGAAAAAGGTTGTTATCGTGGATCGGGATGAGCAACTGATATCTCATCTGCTAGATGAAGAAAAGAAAAATCTTTACTAC GTTCTTGGAGATGCCAAAAATGAAGAGGTCCTGATTCAAGCGGGCGTGACAAGGGCTGGAGGATTGGTAACAACGCTGGA TAGCGATGCGGAAAGCGTTTTTGTTATTCTAACCGCGAAAAGTCTCAATCCAAACCTGAACGTAATCGCTAGATCGAATG AGCATGAGAGCATTAAAAAACTGCAATACGCGGGCGCAAACAATGTGGTACCCATTACAGAGATTGGTGCACACAGGATC GTGAATATGCTAATGAACCCTGTAATTGTAGGGTTCCTCGATTCCATTACCCGCTCAGGCGATCTAGAACTGCGTTTTGA ACAAATTGTCGTTCCGGAAGAAGGATTCCCGGTTGATGGCTTGACCCTTGGTGAAATGGAGATTCCCAAAAAAGTTGGTT TGATCGTTATAGCGATTAACAATGGCGAGAAAAATATCTTCAATCCCAGTGCCGGAACGAGAATCTACCCCGGCTATACC CTCATGGTTCTTGGGGAGGAAGAAAAAATAGAAAAGTTCAACAAACTGCTTAGCGAAGGCGCCTTCACCAACCAGAATAA GCGATAG
Upstream 100 bases:
>100_bases ATTATAGCGCTTCATAGCTTCCTCCTCTTCAAAATTTTATCACAATCCGGAGCTAACTGTTTTACGCGATTTCTGTTATT ATTTTCTCTGGAGGGATAAA
Downstream 100 bases:
>100_bases GATTCAGATACTGAAAGAAACCTTATTCTGTTAAAAATAAGGAAATAAAAAACCTTCGTGCTTCGGATTACATATCTGCA TTTTTTTCAATCGCCACAAT
Product: TrkA-N domain protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MEEISTKHRVILRSIFMIIGVILFGTFGYGVIEDWSFLDSFFMTVITISTVGYGTPGDLSEAGKIFTSFLILSSVTVVVY GFSNITAFVVEGRVNEFLRRRRILKAIEKLTGHCIVIGAGTVGLTVAKELARKGKKVVIVDRDEQLISHLLDEEKKNLYY VLGDAKNEEVLIQAGVTRAGGLVTTLDSDAESVFVILTAKSLNPNLNVIARSNEHESIKKLQYAGANNVVPITEIGAHRI VNMLMNPVIVGFLDSITRSGDLELRFEQIVVPEEGFPVDGLTLGEMEIPKKVGLIVIAINNGEKNIFNPSAGTRIYPGYT LMVLGEEEKIEKFNKLLSEGAFTNQNKR
Sequences:
>Translated_348_residues MEEISTKHRVILRSIFMIIGVILFGTFGYGVIEDWSFLDSFFMTVITISTVGYGTPGDLSEAGKIFTSFLILSSVTVVVY GFSNITAFVVEGRVNEFLRRRRILKAIEKLTGHCIVIGAGTVGLTVAKELARKGKKVVIVDRDEQLISHLLDEEKKNLYY VLGDAKNEEVLIQAGVTRAGGLVTTLDSDAESVFVILTAKSLNPNLNVIARSNEHESIKKLQYAGANNVVPITEIGAHRI VNMLMNPVIVGFLDSITRSGDLELRFEQIVVPEEGFPVDGLTLGEMEIPKKVGLIVIAINNGEKNIFNPSAGTRIYPGYT LMVLGEEEKIEKFNKLLSEGAFTNQNKR >Mature_348_residues MEEISTKHRVILRSIFMIIGVILFGTFGYGVIEDWSFLDSFFMTVITISTVGYGTPGDLSEAGKIFTSFLILSSVTVVVY GFSNITAFVVEGRVNEFLRRRRILKAIEKLTGHCIVIGAGTVGLTVAKELARKGKKVVIVDRDEQLISHLLDEEKKNLYY VLGDAKNEEVLIQAGVTRAGGLVTTLDSDAESVFVILTAKSLNPNLNVIARSNEHESIKKLQYAGANNVVPITEIGAHRI VNMLMNPVIVGFLDSITRSGDLELRFEQIVVPEEGFPVDGLTLGEMEIPKKVGLIVIAINNGEKNIFNPSAGTRIYPGYT LMVLGEEEKIEKFNKLLSEGAFTNQNKR
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=188, Percent_Identity=26.063829787234, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 38313; Mature: 38313
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEISTKHRVILRSIFMIIGVILFGTFGYGVIEDWSFLDSFFMTVITISTVGYGTPGDLS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EAGKIFTSFLILSSVTVVVYGFSNITAFVVEGRVNEFLRRRRILKAIEKLTGHCIVIGAG HHHHHHHHHHHHHHHHEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECC TVGLTVAKELARKGKKVVIVDRDEQLISHLLDEEKKNLYYVLGDAKNEEVLIQAGVTRAG HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCC GLVTTLDSDAESVFVILTAKSLNPNLNVIARSNEHESIKKLQYAGANNVVPITEIGAHRI CEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHH VNMLMNPVIVGFLDSITRSGDLELRFEQIVVPEEGFPVDGLTLGEMEIPKKVGLIVIAIN HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEEE NGEKNIFNPSAGTRIYPGYTLMVLGEEEKIEKFNKLLSEGAFTNQNKR CCCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEEISTKHRVILRSIFMIIGVILFGTFGYGVIEDWSFLDSFFMTVITISTVGYGTPGDLS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EAGKIFTSFLILSSVTVVVYGFSNITAFVVEGRVNEFLRRRRILKAIEKLTGHCIVIGAG HHHHHHHHHHHHHHHHEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECC TVGLTVAKELARKGKKVVIVDRDEQLISHLLDEEKKNLYYVLGDAKNEEVLIQAGVTRAG HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCC GLVTTLDSDAESVFVILTAKSLNPNLNVIARSNEHESIKKLQYAGANNVVPITEIGAHRI CEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHH VNMLMNPVIVGFLDSITRSGDLELRFEQIVVPEEGFPVDGLTLGEMEIPKKVGLIVIAIN HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEEE NGEKNIFNPSAGTRIYPGYTLMVLGEEEKIEKFNKLLSEGAFTNQNKR CCCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]