| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616538
Identifier: 239616538
GI number: 239616538
Start: 144727
End: 145368
Strand: Reverse
Name: 239616538
Synonym: Kole_0130
Alternate gene names: NA
Gene position: 145368-144727 (Counterclockwise)
Preceding gene: 239616539
Following gene: 239616537
Centisome position: 6.31
GC content: 38.79
Gene sequence:
>642_bases ATGAGAAAATTTAAGATGGTCACGGGGCTTTTTTTGGTAATGGTGATAGTGGCGAGTGCCGTGCTTTCGGTTTCACTCAA CGATATATTGGTAACATCAGAAAATATGAAGACAATTAAGTGTGTTGTGAACGCTACCAAGTTCTCAAAAAGGAGCAAAA GCCAGGTCGAATTCCTGTTCTATTTCAATCGGGATGGCCAGAAACTGAGGATAGAATATACGGCACCGAGAAACATGAAA GGCAGCATTGTAGCGATCGACGGTGAGTACTTCTACAATTATATTTCCAGTTTAAAAAGGACTATGAAAAAGGAACTCAG TGGGGATTTTGATAAGAACAAAGCTCCTGGAAGGGATATGGGAATATTCTTTGATTTTGTTTATGGTGACCTTGACAGAG TTTTCAGCAACATGCAGCACGAATATATCGGCGAGGAAACCTTGAAGATAAACAAGAAAGAAGTTAATACTTACCATTAT GTATTTCAGAAAGCAGATGAAAAGCAGGAAGTGTGGTTTGATTCTGAAACGTTGGCTCCGGTGAAGATTGTTATATACCA GGATGGGAAGAAAGTGTACGAAATATTCGTCTTTGATATTCAGATCAATATCACACTTGAAGATTCGCTATTCAGATTGT GA
Upstream 100 bases:
>100_bases ATCTTCAGCATATCGTTTTATTCAACGCTGATACAGGTGGCCTTGAGTATTTTGGGATTGTTTGCGTTTAGAAAAATATT GATAAAAGGAGGTATCCGCA
Downstream 100 bases:
>100_bases GGCGGTAATATGAGAAAAATGCTGGTATTATTTATTTTGGTCATGTCAGTTCTTGCGTTTTCGTTGGATTATAGCCCTGT GCTGGCGGGGCTGTCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRKFKMVTGLFLVMVIVASAVLSVSLNDILVTSENMKTIKCVVNATKFSKRSKSQVEFLFYFNRDGQKLRIEYTAPRNMK GSIVAIDGEYFYNYISSLKRTMKKELSGDFDKNKAPGRDMGIFFDFVYGDLDRVFSNMQHEYIGEETLKINKKEVNTYHY VFQKADEKQEVWFDSETLAPVKIVIYQDGKKVYEIFVFDIQINITLEDSLFRL
Sequences:
>Translated_213_residues MRKFKMVTGLFLVMVIVASAVLSVSLNDILVTSENMKTIKCVVNATKFSKRSKSQVEFLFYFNRDGQKLRIEYTAPRNMK GSIVAIDGEYFYNYISSLKRTMKKELSGDFDKNKAPGRDMGIFFDFVYGDLDRVFSNMQHEYIGEETLKINKKEVNTYHY VFQKADEKQEVWFDSETLAPVKIVIYQDGKKVYEIFVFDIQINITLEDSLFRL >Mature_213_residues MRKFKMVTGLFLVMVIVASAVLSVSLNDILVTSENMKTIKCVVNATKFSKRSKSQVEFLFYFNRDGQKLRIEYTAPRNMK GSIVAIDGEYFYNYISSLKRTMKKELSGDFDKNKAPGRDMGIFFDFVYGDLDRVFSNMQHEYIGEETLKINKKEVNTYHY VFQKADEKQEVWFDSETLAPVKIVIYQDGKKVYEIFVFDIQINITLEDSLFRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24876; Mature: 24876
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFKMVTGLFLVMVIVASAVLSVSLNDILVTSENMKTIKCVVNATKFSKRSKSQVEFLF CCCHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCEEEEEEEEHHHHCCCCCCCEEEEE YFNRDGQKLRIEYTAPRNMKGSIVAIDGEYFYNYISSLKRTMKKELSGDFDKNKAPGRDM EECCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GIFFDFVYGDLDRVFSNMQHEYIGEETLKINKKEVNTYHYVFQKADEKQEVWFDSETLAP EEEEEHHHCCHHHHHHHHHHHHCCCHHEEECHHHHHHEEEEEECCCCCHHEEECCCCCCE VKIVIYQDGKKVYEIFVFDIQINITLEDSLFRL EEEEEEECCCEEEEEEEEEEEEEEEECCCCCCC >Mature Secondary Structure MRKFKMVTGLFLVMVIVASAVLSVSLNDILVTSENMKTIKCVVNATKFSKRSKSQVEFLF CCCHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCEEEEEEEEHHHHCCCCCCCEEEEE YFNRDGQKLRIEYTAPRNMKGSIVAIDGEYFYNYISSLKRTMKKELSGDFDKNKAPGRDM EECCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GIFFDFVYGDLDRVFSNMQHEYIGEETLKINKKEVNTYHYVFQKADEKQEVWFDSETLAP EEEEEHHHCCHHHHHHHHHHHHCCCHHEEECHHHHHHEEEEEECCCCCHHEEECCCCCCE VKIVIYQDGKKVYEIFVFDIQINITLEDSLFRL EEEEEEECCCEEEEEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA