Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is 239616472

Identifier: 239616472

GI number: 239616472

Start: 73638

End: 76265

Strand: Reverse

Name: 239616472

Synonym: Kole_0061

Alternate gene names: NA

Gene position: 76265-73638 (Counterclockwise)

Preceding gene: 239616473

Following gene: 239616469

Centisome position: 3.31

GC content: 31.66

Gene sequence:

>2628_bases
ATGCCTGATAATCAAAGATTAAACCAGGAATATGATATTCTTTCAAAAATGGGGTATCTTAAAAAGGACATTCCTAAATA
CATTGAAGATAATCTCAATCCAAGGTTTAAATTAAGACCATACCAGATCGAGGCTATAGCAAGGTTTATACATTATCTTG
AAGAAAATCCTAATAGAAAAAGACCAACACAACTTCTCTTTAATATGGCAACCGGTTCTGGTAAAACTCTATTGATGGCT
GCAAATATTCTTTATCTTTACAATAAAGGCTATAGAAACTTCTTATTTTTCGTGAACAGCACCAACATAATAGAGAAAAC
AAGAGACAACTTTTTAAATCTCCTCTCTCCTAAATATCTTTTTAATCAGAGAATTAAATTTGAGGATAAAGAAGTTGTAA
TAAGAGAGGTTTCCAATTTTGATGAAGCAAATGAGGAAGACATAAATATAATCTTCACGACAATACAGGGACTGCATAGC
CAGTTAAATCTTTTCAGGGAAAATTCCATTACTTTTGAAGATCTTAAGGATAAGAAAATCGTTTTAATTTCAGATGAAGC
CCATCATATCAACGCCTGGACGAGGAATAGATTGAGCAAAACCGAGGAGATGAAAAAAACTTCTTGGGAATATACCGTTA
TGCAGATTCTAAACTCAAATCCTGAAAATATATTGCTTGAATATACCGCCACCATTGATTTAGAGAATCCCAGTATTTAC
AGCAAATACAAAGATAAGATAATTTTTGAGTATGATCTCAAGCAATTTAGAATTGACGGTTATTCAAAAGAGGTGAAGGT
TTTACAGGCAGATCTTGAAAACTGGGAAAGGATGTTGCAGGCGGTTATTTTAAGCCAGTATAGAAGAAAAATAGCGGAGA
GAAATGGGATTAGATTAAAACCTGTGATACTTTTTAAATCAAGGAGCATTAAAGAATCCAAAGAGAATTATGAATTATTT
AGAGAAAGAATGGACAATATGAGTGAAGCAGACATAGAGGCGATAAAATCAAATTCCACTGGAACTGTATTGGAGAGAGT
ATTTAATTATTTTGAAAACGAGGGAATAAATGTAGATAATCTTATAACCGAGTTAAAAGAGGATTTTTCAGAGGAAAAAT
GTATTTTGCTTGATTCTGAAAACATAGATAAAGAGAAACAGATTAGACTTAATACCCTTGAGGATGAAAATAATGAGATA
AGAGCTATTTTTGCTGTTAAGATGCTTGATGAAGGCTGGGATGTGTTAAATCTCTTTGATATAGTCAGGCTTTATGATAC
AAGGGATGGACGGTGGACAAGGGATGGTAGATATATCCCTGGTAATACCACTATTGCAGAGAGGCAGTTGATAGGAAGAG
GTGCAAGGTATTATCCATTCAAAATCAATGAAGAGGATGATCTATTTAAGAGAAAATTTGATAACCAACCGGAAAATCCC
TTGAAAATCCTTGAAGAGCTTTATTATCACAGCAAATATAATCCCAGATACATACAGGAACTTACTACGGCTCTCAAGGA
ATACGGTATTATGCCCTATGAAGAAAAAGAGATTCAATTAAGAGTGAAACCTGATATAAAAAACACTGAGTTTTGGAAAA
AAGGATTTTTATTTGTAAATAAAAAGGTTGAGGCTGACAGAAGAGGCATTAAAACTATTGATGATATAGAAATAGAAAGA
ACATATAAATACATCCTTCCAACGGGATTTTTGAGAGAAGATATTGTTTTACAAGAAGAAACTACCAGAAGAAATTCTTT
TGAAACAACTACACGGACATTTCGTTTAGGTGATTTTGGGGATGTGGTTATAAGAAAAGCCATGGCAAAACTTGATTTTT
ATAGATTCAGCAATCTTAAAAGATACTTTCCTGATTTGAATTCTTCAAAGGAATTTATCGAGTCTTTAAAAAAAATAAAT
GTTGATATTACCAGTTCTAGAGAGAAGTTAGATGACTTAACACCTGATGATAAATTAAAAGCATGTTTAAATGTGTTGCT
ACAACTGGAAAATGAAATTCTGAATGAATATGTTGAGTATAAAGGGACTGAAGTTTTCGTTCCGATTGAGATCAAGGAAG
TTGTAAAAGATAAACAGCTTAAAATAAATGTTGGAGACTATGGAGATCAGGAGTATGGGATACCTATGAGTAATGCGAAG
CACCCATATTTACAATTGAACCTTGCTAATAAAGATTGGTATATTTATGACGAGAATTATGGAACATACGAAGAAAAATC
TTTTGTTAAGTTTATTGATGGTGTCATAAATGAATTGAGACAAAAATATAGTGAAGTATATTTGTTAAGAAATGCAAATC
TATTTAAAATTTATAGATTCTCAGATGGTAAAGCTATGGAACCAGATTTTGTCTTGTTTCTAAGAAGGGAAGATTCTAAA
GAAATAGAACAGTATCAACTTTTCATAGAGACTAAAGGAGAACATTTGATTAAAACTGATCAATGGAAAGAAGATTTCTT
AAAAGAAATTGAAGAAAAATATAGTATCAATCTTAAAGCTACTATATTTGGAGAGAATGAAAAATATAGATTAATTGGGT
TGCCATTTTATAATGAAGGCAGGAAAAATGAGTTTATAAATGAGTTTAAGAAAAAACTAGGCTTATAA

Upstream 100 bases:

>100_bases
AACGACCTTTATGTAAATTACAGCGAAATTGATGATGTTATTTACAATGTGAGTGAAGAAGACAAAAAGCTCAATAAAGA
CTTTTACGAGGAGAGAAAAG

Downstream 100 bases:

>100_bases
AATTGAGATAGCGGGCGTGTCACATATTTTGTGTAAACCCCAAACTCCGGAAAAGATCAGACATAGGATTTCACCCAATC
AAATTCTATCATCAAAGTGG

Product: Type III site-specific deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 875; Mature: 874

Protein sequence:

>875_residues
MPDNQRLNQEYDILSKMGYLKKDIPKYIEDNLNPRFKLRPYQIEAIARFIHYLEENPNRKRPTQLLFNMATGSGKTLLMA
ANILYLYNKGYRNFLFFVNSTNIIEKTRDNFLNLLSPKYLFNQRIKFEDKEVVIREVSNFDEANEEDINIIFTTIQGLHS
QLNLFRENSITFEDLKDKKIVLISDEAHHINAWTRNRLSKTEEMKKTSWEYTVMQILNSNPENILLEYTATIDLENPSIY
SKYKDKIIFEYDLKQFRIDGYSKEVKVLQADLENWERMLQAVILSQYRRKIAERNGIRLKPVILFKSRSIKESKENYELF
RERMDNMSEADIEAIKSNSTGTVLERVFNYFENEGINVDNLITELKEDFSEEKCILLDSENIDKEKQIRLNTLEDENNEI
RAIFAVKMLDEGWDVLNLFDIVRLYDTRDGRWTRDGRYIPGNTTIAERQLIGRGARYYPFKINEEDDLFKRKFDNQPENP
LKILEELYYHSKYNPRYIQELTTALKEYGIMPYEEKEIQLRVKPDIKNTEFWKKGFLFVNKKVEADRRGIKTIDDIEIER
TYKYILPTGFLREDIVLQEETTRRNSFETTTRTFRLGDFGDVVIRKAMAKLDFYRFSNLKRYFPDLNSSKEFIESLKKIN
VDITSSREKLDDLTPDDKLKACLNVLLQLENEILNEYVEYKGTEVFVPIEIKEVVKDKQLKINVGDYGDQEYGIPMSNAK
HPYLQLNLANKDWYIYDENYGTYEEKSFVKFIDGVINELRQKYSEVYLLRNANLFKIYRFSDGKAMEPDFVLFLRREDSK
EIEQYQLFIETKGEHLIKTDQWKEDFLKEIEEKYSINLKATIFGENEKYRLIGLPFYNEGRKNEFINEFKKKLGL

Sequences:

>Translated_875_residues
MPDNQRLNQEYDILSKMGYLKKDIPKYIEDNLNPRFKLRPYQIEAIARFIHYLEENPNRKRPTQLLFNMATGSGKTLLMA
ANILYLYNKGYRNFLFFVNSTNIIEKTRDNFLNLLSPKYLFNQRIKFEDKEVVIREVSNFDEANEEDINIIFTTIQGLHS
QLNLFRENSITFEDLKDKKIVLISDEAHHINAWTRNRLSKTEEMKKTSWEYTVMQILNSNPENILLEYTATIDLENPSIY
SKYKDKIIFEYDLKQFRIDGYSKEVKVLQADLENWERMLQAVILSQYRRKIAERNGIRLKPVILFKSRSIKESKENYELF
RERMDNMSEADIEAIKSNSTGTVLERVFNYFENEGINVDNLITELKEDFSEEKCILLDSENIDKEKQIRLNTLEDENNEI
RAIFAVKMLDEGWDVLNLFDIVRLYDTRDGRWTRDGRYIPGNTTIAERQLIGRGARYYPFKINEEDDLFKRKFDNQPENP
LKILEELYYHSKYNPRYIQELTTALKEYGIMPYEEKEIQLRVKPDIKNTEFWKKGFLFVNKKVEADRRGIKTIDDIEIER
TYKYILPTGFLREDIVLQEETTRRNSFETTTRTFRLGDFGDVVIRKAMAKLDFYRFSNLKRYFPDLNSSKEFIESLKKIN
VDITSSREKLDDLTPDDKLKACLNVLLQLENEILNEYVEYKGTEVFVPIEIKEVVKDKQLKINVGDYGDQEYGIPMSNAK
HPYLQLNLANKDWYIYDENYGTYEEKSFVKFIDGVINELRQKYSEVYLLRNANLFKIYRFSDGKAMEPDFVLFLRREDSK
EIEQYQLFIETKGEHLIKTDQWKEDFLKEIEEKYSINLKATIFGENEKYRLIGLPFYNEGRKNEFINEFKKKLGL
>Mature_874_residues
PDNQRLNQEYDILSKMGYLKKDIPKYIEDNLNPRFKLRPYQIEAIARFIHYLEENPNRKRPTQLLFNMATGSGKTLLMAA
NILYLYNKGYRNFLFFVNSTNIIEKTRDNFLNLLSPKYLFNQRIKFEDKEVVIREVSNFDEANEEDINIIFTTIQGLHSQ
LNLFRENSITFEDLKDKKIVLISDEAHHINAWTRNRLSKTEEMKKTSWEYTVMQILNSNPENILLEYTATIDLENPSIYS
KYKDKIIFEYDLKQFRIDGYSKEVKVLQADLENWERMLQAVILSQYRRKIAERNGIRLKPVILFKSRSIKESKENYELFR
ERMDNMSEADIEAIKSNSTGTVLERVFNYFENEGINVDNLITELKEDFSEEKCILLDSENIDKEKQIRLNTLEDENNEIR
AIFAVKMLDEGWDVLNLFDIVRLYDTRDGRWTRDGRYIPGNTTIAERQLIGRGARYYPFKINEEDDLFKRKFDNQPENPL
KILEELYYHSKYNPRYIQELTTALKEYGIMPYEEKEIQLRVKPDIKNTEFWKKGFLFVNKKVEADRRGIKTIDDIEIERT
YKYILPTGFLREDIVLQEETTRRNSFETTTRTFRLGDFGDVVIRKAMAKLDFYRFSNLKRYFPDLNSSKEFIESLKKINV
DITSSREKLDDLTPDDKLKACLNVLLQLENEILNEYVEYKGTEVFVPIEIKEVVKDKQLKINVGDYGDQEYGIPMSNAKH
PYLQLNLANKDWYIYDENYGTYEEKSFVKFIDGVINELRQKYSEVYLLRNANLFKIYRFSDGKAMEPDFVLFLRREDSKE
IEQYQLFIETKGEHLIKTDQWKEDFLKEIEEKYSINLKATIFGENEKYRLIGLPFYNEGRKNEFINEFKKKLGL

Specific function: Unknown

COG id: COG3421

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.1.21.5 [H]

Molecular weight: Translated: 104410; Mature: 104279

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNQRLNQEYDILSKMGYLKKDIPKYIEDNLNPRFKLRPYQIEAIARFIHYLEENPNRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC
RPTQLLFNMATGSGKTLLMAANILYLYNKGYRNFLFFVNSTNIIEKTRDNFLNLLSPKYL
CCHHHHEEECCCCCCEEEEEHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCHHH
FNQRIKFEDKEVVIREVSNFDEANEEDINIIFTTIQGLHSQLNLFRENSITFEDLKDKKI
HCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCEE
VLISDEAHHINAWTRNRLSKTEEMKKTSWEYTVMQILNSNPENILLEYTATIDLENPSIY
EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHH
SKYKDKIIFEYDLKQFRIDGYSKEVKVLQADLENWERMLQAVILSQYRRKIAERNGIRLK
HHHCCCEEEEECCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
PVILFKSRSIKESKENYELFRERMDNMSEADIEAIKSNSTGTVLERVFNYFENEGINVDN
EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
LITELKEDFSEEKCILLDSENIDKEKQIRLNTLEDENNEIRAIFAVKMLDEGWDVLNLFD
HHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEHHCCCCHHHHHH
IVRLYDTRDGRWTRDGRYIPGNTTIAERQLIGRGARYYPFKINEEDDLFKRKFDNQPENP
HHHHHCCCCCCCCCCCEECCCCCCHHHHHHHCCCCEECCEEECCCHHHHHHHCCCCCCCH
LKILEELYYHSKYNPRYIQELTTALKEYGIMPYEEKEIQLRVKPDIKNTEFWKKGFLFVN
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHCCCEEEE
KKVEADRRGIKTIDDIEIERTYKYILPTGFLREDIVLQEETTRRNSFETTTRTFRLGDFG
CCCCHHHCCCCCCCCCCHHHHHHHHCCCCCHHHCEEECCHHHCCCCCCCHHEEEECCCHH
DVVIRKAMAKLDFYRFSNLKRYFPDLNSSKEFIESLKKINVDITSSREKLDDLTPDDKLK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCCCCHHHH
ACLNVLLQLENEILNEYVEYKGTEVFVPIEIKEVVKDKQLKINVGDYGDQEYGIPMSNAK
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
HPYLQLNLANKDWYIYDENYGTYEEKSFVKFIDGVINELRQKYSEVYLLRNANLFKIYRF
CCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEE
SDGKAMEPDFVLFLRREDSKEIEQYQLFIETKGEHLIKTDQWKEDFLKEIEEKYSINLKA
CCCCCCCCCEEEEEECCCCHHHHHEEEEEEECCCEEECCCCHHHHHHHHHHHHHCEEEEE
TIFGENEKYRLIGLPFYNEGRKNEFINEFKKKLGL
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PDNQRLNQEYDILSKMGYLKKDIPKYIEDNLNPRFKLRPYQIEAIARFIHYLEENPNRK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC
RPTQLLFNMATGSGKTLLMAANILYLYNKGYRNFLFFVNSTNIIEKTRDNFLNLLSPKYL
CCHHHHEEECCCCCCEEEEEHHEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCHHH
FNQRIKFEDKEVVIREVSNFDEANEEDINIIFTTIQGLHSQLNLFRENSITFEDLKDKKI
HCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCEE
VLISDEAHHINAWTRNRLSKTEEMKKTSWEYTVMQILNSNPENILLEYTATIDLENPSIY
EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHH
SKYKDKIIFEYDLKQFRIDGYSKEVKVLQADLENWERMLQAVILSQYRRKIAERNGIRLK
HHHCCCEEEEECCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
PVILFKSRSIKESKENYELFRERMDNMSEADIEAIKSNSTGTVLERVFNYFENEGINVDN
EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
LITELKEDFSEEKCILLDSENIDKEKQIRLNTLEDENNEIRAIFAVKMLDEGWDVLNLFD
HHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEHHCCCCHHHHHH
IVRLYDTRDGRWTRDGRYIPGNTTIAERQLIGRGARYYPFKINEEDDLFKRKFDNQPENP
HHHHHCCCCCCCCCCCEECCCCCCHHHHHHHCCCCEECCEEECCCHHHHHHHCCCCCCCH
LKILEELYYHSKYNPRYIQELTTALKEYGIMPYEEKEIQLRVKPDIKNTEFWKKGFLFVN
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHCCCEEEE
KKVEADRRGIKTIDDIEIERTYKYILPTGFLREDIVLQEETTRRNSFETTTRTFRLGDFG
CCCCHHHCCCCCCCCCCHHHHHHHHCCCCCHHHCEEECCHHHCCCCCCCHHEEEECCCHH
DVVIRKAMAKLDFYRFSNLKRYFPDLNSSKEFIESLKKINVDITSSREKLDDLTPDDKLK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCCCCHHHH
ACLNVLLQLENEILNEYVEYKGTEVFVPIEIKEVVKDKQLKINVGDYGDQEYGIPMSNAK
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
HPYLQLNLANKDWYIYDENYGTYEEKSFVKFIDGVINELRQKYSEVYLLRNANLFKIYRF
CCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEE
SDGKAMEPDFVLFLRREDSKEIEQYQLFIETKGEHLIKTDQWKEDFLKEIEEKYSINLKA
CCCCCCCCCEEEEEECCCCHHHHHEEEEEEECCCEEECCCCHHHHHHHHHHHHHCEEEEE
TIFGENEKYRLIGLPFYNEGRKNEFINEFKKKLGL
EEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]