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The map label for this gene is licB [H]

Identifier: 238926032

GI number: 238926032

Start: 3431360

End: 3431773

Strand: Reverse

Name: licB [H]

Synonym: EUBREC_3690

Alternate gene names: 238926032

Gene position: 3431773-3431360 (Counterclockwise)

Preceding gene: 238926033

Following gene: 238926031

Centisome position: 99.48

GC content: 39.13

Gene sequence:

>414_bases
ATGGAACAGAAACCAGAAACAGGAAAAAGTACTGACAAAACGAAAAATACTTGTTATACTAGCACCATCAAAGCAAATGA
GAAAAAAATAAGGGAGGAAACAATCATGGTAATTCGATTATTTTGTGCAGCAGGAATGTCAACCAGTCTTCTCGTAAAGA
AGATGGAAGAGGCAGCAAAGGAAAAAGGAAAAGATGTTGATATCGTAGCATATCCATTTACAGAGATGGAACGCGTGATT
GAAGGCGTGGATGTAGCACTGCTCGGACCACAGGTAGGATATCAGCTTGCCAGAGCAAAAGAGATCTGTGATCCAAAAGG
GGTTCCGGTAGATGTGATCCCAATGCAGGATTATGGAATGTGCAATGGAATGAATGTTTTGAAATTTGCATATAAGCTTG
CGAAAAATAAATAA

Upstream 100 bases:

>100_bases
TAAAAAGTATCATAATATACAAAAAAGGAAAAGGAAAACAGTGCATTTTACACAATAAAGTAGAATGCCCTGTTTTTTTT
ATGTAACAAATTCCGTCTAT

Downstream 100 bases:

>100_bases
GAGAAAACAAAGATACACAATTTAAAGCAAAAAACAGAGCAAAGGGTAGTAGCAAATGAAAGAGAAATTTAACGAAAAAG
TAATCCCTGTAATCCTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MEQKPETGKSTDKTKNTCYTSTIKANEKKIREETIMVIRLFCAAGMSTSLLVKKMEEAAKEKGKDVDIVAYPFTEMERVI
EGVDVALLGPQVGYQLARAKEICDPKGVPVDVIPMQDYGMCNGMNVLKFAYKLAKNK

Sequences:

>Translated_137_residues
MEQKPETGKSTDKTKNTCYTSTIKANEKKIREETIMVIRLFCAAGMSTSLLVKKMEEAAKEKGKDVDIVAYPFTEMERVI
EGVDVALLGPQVGYQLARAKEICDPKGVPVDVIPMQDYGMCNGMNVLKFAYKLAKNK
>Mature_137_residues
MEQKPETGKSTDKTKNTCYTSTIKANEKKIREETIMVIRLFCAAGMSTSLLVKKMEEAAKEKGKDVDIVAYPFTEMERVI
EGVDVALLGPQVGYQLARAKEICDPKGVPVDVIPMQDYGMCNGMNVLKFAYKLAKNK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=90, Percent_Identity=44.4444444444444, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 15244; Mature: 15244

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKPETGKSTDKTKNTCYTSTIKANEKKIREETIMVIRLFCAAGMSTSLLVKKMEEAAK
CCCCCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EKGKDVDIVAYPFTEMERVIEGVDVALLGPQVGYQLARAKEICDPKGVPVDVIPMQDYGM
HCCCCCEEEEECHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
CNGMNVLKFAYKLAKNK
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEQKPETGKSTDKTKNTCYTSTIKANEKKIREETIMVIRLFCAAGMSTSLLVKKMEEAAK
CCCCCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EKGKDVDIVAYPFTEMERVIEGVDVALLGPQVGYQLARAKEICDPKGVPVDVIPMQDYGM
HCCCCCEEEEECHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
CNGMNVLKFAYKLAKNK
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]