| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925918
Identifier: 238925918
GI number: 238925918
Start: 3352053
End: 3352922
Strand: Reverse
Name: 238925918
Synonym: EUBREC_3576
Alternate gene names: NA
Gene position: 3352922-3352053 (Counterclockwise)
Preceding gene: 238925919
Following gene: 238925917
Centisome position: 97.2
GC content: 43.68
Gene sequence:
>870_bases ATGAACACCATCATTGAGAGAATTACGGAAGCGATAAAGGATATCCTGATCGGGCTTATCAAGTCATGTTTGGATAACAT GTTCACGTCTGTCAATGAGCAGGTGGGAACCATAGCCGGGCAGGTGGGACAGACACCGCAGGGATGGAATGCAGGGATCT TTAATCTGATCCAGAACATTTCCCAGACAGTAATTGTCCCCATTGCGGGACTGATCATCACCTTTGTCTTGTGCTATGAG CTGATTACGATGGTAACGCAGAAAAACAATTTCCATGAATTTGAGACTTACAACATTTTCCTCTGGATTTTCAAGGCGTA TGTAGCCATTTATTTGGTGACAAATACGTTCAATATCACGATGGCGGTCTTTGATGTTGGCCAGCATGTGGTCAACAATG CCGCCGGGGTGATCTCCGGGAACACAGCGGTGGATGCATCAGAAGCAGTCGCAAGGATTGTGGATGCACTGGAAGATATG GAACTGGGGGATTTGTTCCTGCTATCCATGGAAACGCTGTTGATCAGTATTACCATGCGGATTCTGTCGATCATCATAAC CGTTATTTTGTACGGAAGAATGATAGAAATTTACCTTTATACTTCCATAGCACCAATTCCGTTTGCCACCATGACCAATA AGGAATGGGGCAATATCGGAAACAACTATTTAAAAGGCTTGTTCGCACTGGCATTTCAGGGATTCTTCATGATGGTCTGT GTGGGAATTTATGCAGTTTTAGTAAATGCAATGACCATATCCAGTGACCTTCATGCAGCAATGTTTTCAGTAGCGGCGTA TACCGTGATTCTTGCATTTTCATTATTCAAGACCGGAAGCCTTAGCAAATCAATATTCAATGCCCACTAA
Upstream 100 bases:
>100_bases CCAGGGCATCAAACAGCTGATGGCTGGTGCCGGAATCATGCTGCTGGGAACTACCCTGATTCCACAGCTGGCAACATTGT TCTCTTAAGAGGAGTGGTAG
Downstream 100 bases:
>100_bases CGGGCAGGAAAGGAGCGCATACCATGGCGTATGTACCAGTACCAAAAGACCTTACCAAGGTCAAAACAAAAGTAGCGTTA AATCTGACAAAGCGGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNTIIERITEAIKDILIGLIKSCLDNMFTSVNEQVGTIAGQVGQTPQGWNAGIFNLIQNISQTVIVPIAGLIITFVLCYE LITMVTQKNNFHEFETYNIFLWIFKAYVAIYLVTNTFNITMAVFDVGQHVVNNAAGVISGNTAVDASEAVARIVDALEDM ELGDLFLLSMETLLISITMRILSIIITVILYGRMIEIYLYTSIAPIPFATMTNKEWGNIGNNYLKGLFALAFQGFFMMVC VGIYAVLVNAMTISSDLHAAMFSVAAYTVILAFSLFKTGSLSKSIFNAH
Sequences:
>Translated_289_residues MNTIIERITEAIKDILIGLIKSCLDNMFTSVNEQVGTIAGQVGQTPQGWNAGIFNLIQNISQTVIVPIAGLIITFVLCYE LITMVTQKNNFHEFETYNIFLWIFKAYVAIYLVTNTFNITMAVFDVGQHVVNNAAGVISGNTAVDASEAVARIVDALEDM ELGDLFLLSMETLLISITMRILSIIITVILYGRMIEIYLYTSIAPIPFATMTNKEWGNIGNNYLKGLFALAFQGFFMMVC VGIYAVLVNAMTISSDLHAAMFSVAAYTVILAFSLFKTGSLSKSIFNAH >Mature_289_residues MNTIIERITEAIKDILIGLIKSCLDNMFTSVNEQVGTIAGQVGQTPQGWNAGIFNLIQNISQTVIVPIAGLIITFVLCYE LITMVTQKNNFHEFETYNIFLWIFKAYVAIYLVTNTFNITMAVFDVGQHVVNNAAGVISGNTAVDASEAVARIVDALEDM ELGDLFLLSMETLLISITMRILSIIITVILYGRMIEIYLYTSIAPIPFATMTNKEWGNIGNNYLKGLFALAFQGFFMMVC VGIYAVLVNAMTISSDLHAAMFSVAAYTVILAFSLFKTGSLSKSIFNAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31841; Mature: 31841
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIIERITEAIKDILIGLIKSCLDNMFTSVNEQVGTIAGQVGQTPQGWNAGIFNLIQNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH SQTVIVPIAGLIITFVLCYELITMVTQKNNFHEFETYNIFLWIFKAYVAIYLVTNTFNIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVFDVGQHVVNNAAGVISGNTAVDASEAVARIVDALEDMELGDLFLLSMETLLISITMR HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILSIIITVILYGRMIEIYLYTSIAPIPFATMTNKEWGNIGNNYLKGLFALAFQGFFMMVC HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VGIYAVLVNAMTISSDLHAAMFSVAAYTVILAFSLFKTGSLSKSIFNAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MNTIIERITEAIKDILIGLIKSCLDNMFTSVNEQVGTIAGQVGQTPQGWNAGIFNLIQNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH SQTVIVPIAGLIITFVLCYELITMVTQKNNFHEFETYNIFLWIFKAYVAIYLVTNTFNIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVFDVGQHVVNNAAGVISGNTAVDASEAVARIVDALEDMELGDLFLLSMETLLISITMR HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILSIIITVILYGRMIEIYLYTSIAPIPFATMTNKEWGNIGNNYLKGLFALAFQGFFMMVC HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VGIYAVLVNAMTISSDLHAAMFSVAAYTVILAFSLFKTGSLSKSIFNAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA