| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925917
Identifier: 238925917
GI number: 238925917
Start: 3351565
End: 3352029
Strand: Reverse
Name: 238925917
Synonym: EUBREC_3575
Alternate gene names: NA
Gene position: 3352029-3351565 (Counterclockwise)
Preceding gene: 238925918
Following gene: 238925916
Centisome position: 97.17
GC content: 42.37
Gene sequence:
>465_bases ATGGCGTATGTACCAGTACCAAAAGACCTTACCAAGGTCAAAACAAAAGTAGCGTTAAATCTGACAAAGCGGCAGTTGAT TTTCTTTTCACTTGCCGCAGTTGTGGGAATTCCGTTTTATCTGTTCATGAGAAAACCAATCGGTTCCAGTATCGCTGCCA TTCTGATGGTAACGATCATGCTTCCGTTTTTCTTCATGGCGATGTATGAAAAAGACGGGCTTCCCTTTGAAAAAGTGGTG GCAAATATCATTCGACAGAAGTTTATATGTCCAGCGGTAAGACCATATAAGACAGAAAATTTTTATCAGGAGATTTCCAC CCTTGTAAAAAAGGAGGGTGTGCCGGATGGCAAAAAAGACAAAGCAGGAGGCTCAGCAGGAGCGTCTGTCCCTGGCGGAA AAAAGAAACCGTCAGGAAAGAAGAAACAAAAAAAGCAGAAAAGAAAGAGAACAGGAAAAGCGTAG
Upstream 100 bases:
>100_bases CGGCGTATACCGTGATTCTTGCATTTTCATTATTCAAGACCGGAAGCCTTAGCAAATCAATATTCAATGCCCACTAACGG GCAGGAAAGGAGCGCATACC
Downstream 100 bases:
>100_bases GAAGAAGCAGGAACGGGATCGTAGGAAACAGAAAAACATTCCTACAACTGCACAGCAGAGTATTCCGTATATTCGGATGC TGCAGGATGGTATCTGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAYVPVPKDLTKVKTKVALNLTKRQLIFFSLAAVVGIPFYLFMRKPIGSSIAAILMVTIMLPFFFMAMYEKDGLPFEKVV ANIIRQKFICPAVRPYKTENFYQEISTLVKKEGVPDGKKDKAGGSAGASVPGGKKKPSGKKKQKKQKRKRTGKA
Sequences:
>Translated_154_residues MAYVPVPKDLTKVKTKVALNLTKRQLIFFSLAAVVGIPFYLFMRKPIGSSIAAILMVTIMLPFFFMAMYEKDGLPFEKVV ANIIRQKFICPAVRPYKTENFYQEISTLVKKEGVPDGKKDKAGGSAGASVPGGKKKPSGKKKQKKQKRKRTGKA >Mature_153_residues AYVPVPKDLTKVKTKVALNLTKRQLIFFSLAAVVGIPFYLFMRKPIGSSIAAILMVTIMLPFFFMAMYEKDGLPFEKVVA NIIRQKFICPAVRPYKTENFYQEISTLVKKEGVPDGKKDKAGGSAGASVPGGKKKPSGKKKQKKQKRKRTGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17101; Mature: 16970
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYVPVPKDLTKVKTKVALNLTKRQLIFFSLAAVVGIPFYLFMRKPIGSSIAAILMVTIM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPFFFMAMYEKDGLPFEKVVANIIRQKFICPAVRPYKTENFYQEISTLVKKEGVPDGKKD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC KAGGSAGASVPGGKKKPSGKKKQKKQKRKRTGKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AYVPVPKDLTKVKTKVALNLTKRQLIFFSLAAVVGIPFYLFMRKPIGSSIAAILMVTIM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPFFFMAMYEKDGLPFEKVVANIIRQKFICPAVRPYKTENFYQEISTLVKKEGVPDGKKD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC KAGGSAGASVPGGKKKPSGKKKQKKQKRKRTGKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA