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The map label for this gene is yqfA [C]

Identifier: 238925727

GI number: 238925727

Start: 3195408

End: 3196160

Strand: Reverse

Name: yqfA [C]

Synonym: EUBREC_3384

Alternate gene names: 238925727

Gene position: 3196160-3195408 (Counterclockwise)

Preceding gene: 238925730

Following gene: 238925726

Centisome position: 92.65

GC content: 46.75

Gene sequence:

>753_bases
ATGGCAGAAATAAAGAACTCGGAATCAGATATGAGCACTCAGCAGAAAGCTGAGCTGGACAAAGAGAAAAGAAAAGAAGA
GAAGAAAGAGGCAAAAAGAGCAAAAAGGCAGCACTACAGGGAACTGAATGAGCCACCAAAACTCACCGTGCTTGAGGAAG
TGGGAAATGCAGTCACCCATGGAATAGGAGCAGGACTTGCCATAGCCGGCTTTGTCCTTCTTCTCCTGAAGTCAGACACA
GGGCTCAAAGTGATGGCATCGTGTTTTTATGGAATATCACTGATATTGATGTTTCTTATGAGCTGCCTGTATCACTCATA
CAAATCCGGGCTAGCAGTCAAGCGTATCTGGAGAAGATTTGACTATTCCTCGATATATCTGCTGATAGGCGGAACATTTG
CTCCGATGTACCTTGTGTACTGGGAAAATGTGCTTGGAATAGTGTTGTTCTGTGTGCAGTGGGCGCTCATCATAGCGGGG
ATCACCATCATATGTGTGTTCGGACCAGGCAGGTTCCGACCGATACACTATACGCTGTACTTCGTCATCGGATGGAGCGC
CATCATGTTCATTCCAGACTGGTTCAGAAATGACAAGCCGCTTTTGGGGTGGATCGTGGGCGGTGGTATTGTCTATACGC
TCGGCATGATTCCATTTGTGAAGGACACCAAGGGGATGCACTTTATCTGGCATATCTTTGTGATGCTGGGGGCTGCGCTG
CATTGGTTTGGAATGTACCTTTATGTGTATTAA

Upstream 100 bases:

>100_bases
GGGCTGTACTCTGTACGGTGCAGGAAACTGCGGTTGTAAGACAGTGTAGATTATAGATAGCAGAATAAATTATAGATAGA
AAGGAGTTTCAGGATTAAAT

Downstream 100 bases:

>100_bases
TAAAAGATAGATAAAAATGGGCCTATTTTCACAGTCCATTTTTCTGTTGCTAGTAGTTGATTACAGACATAAACAATGGT
ATCCTTTAGTCAGTTATAAA

Product: putative membrane protein, hemolysin IIIrelated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAEIKNSESDMSTQQKAELDKEKRKEEKKEAKRAKRQHYRELNEPPKLTVLEEVGNAVTHGIGAGLAIAGFVLLLLKSDT
GLKVMASCFYGISLILMFLMSCLYHSYKSGLAVKRIWRRFDYSSIYLLIGGTFAPMYLVYWENVLGIVLFCVQWALIIAG
ITIICVFGPGRFRPIHYTLYFVIGWSAIMFIPDWFRNDKPLLGWIVGGGIVYTLGMIPFVKDTKGMHFIWHIFVMLGAAL
HWFGMYLYVY

Sequences:

>Translated_250_residues
MAEIKNSESDMSTQQKAELDKEKRKEEKKEAKRAKRQHYRELNEPPKLTVLEEVGNAVTHGIGAGLAIAGFVLLLLKSDT
GLKVMASCFYGISLILMFLMSCLYHSYKSGLAVKRIWRRFDYSSIYLLIGGTFAPMYLVYWENVLGIVLFCVQWALIIAG
ITIICVFGPGRFRPIHYTLYFVIGWSAIMFIPDWFRNDKPLLGWIVGGGIVYTLGMIPFVKDTKGMHFIWHIFVMLGAAL
HWFGMYLYVY
>Mature_249_residues
AEIKNSESDMSTQQKAELDKEKRKEEKKEAKRAKRQHYRELNEPPKLTVLEEVGNAVTHGIGAGLAIAGFVLLLLKSDTG
LKVMASCFYGISLILMFLMSCLYHSYKSGLAVKRIWRRFDYSSIYLLIGGTFAPMYLVYWENVLGIVLFCVQWALIIAGI
TIICVFGPGRFRPIHYTLYFVIGWSAIMFIPDWFRNDKPLLGWIVGGGIVYTLGMIPFVKDTKGMHFIWHIFVMLGAALH
WFGMYLYVY

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI52630445, Length=224, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI154759275, Length=238, Percent_Identity=28.1512605042017, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1789266, Length=205, Percent_Identity=35.1219512195122, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71996356, Length=227, Percent_Identity=28.1938325991189, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24640324, Length=262, Percent_Identity=24.4274809160305, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 28632; Mature: 28501

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIKNSESDMSTQQKAELDKEKRKEEKKEAKRAKRQHYRELNEPPKLTVLEEVGNAVTH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GIGAGLAIAGFVLLLLKSDTGLKVMASCFYGISLILMFLMSCLYHSYKSGLAVKRIWRRF
HHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
DYSSIYLLIGGTFAPMYLVYWENVLGIVLFCVQWALIIAGITIICVFGPGRFRPIHYTLY
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
FVIGWSAIMFIPDWFRNDKPLLGWIVGGGIVYTLGMIPFVKDTKGMHFIWHIFVMLGAAL
HHHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
HWFGMYLYVY
HHHHHHHHCC
>Mature Secondary Structure 
AEIKNSESDMSTQQKAELDKEKRKEEKKEAKRAKRQHYRELNEPPKLTVLEEVGNAVTH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GIGAGLAIAGFVLLLLKSDTGLKVMASCFYGISLILMFLMSCLYHSYKSGLAVKRIWRRF
HHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
DYSSIYLLIGGTFAPMYLVYWENVLGIVLFCVQWALIIAGITIICVFGPGRFRPIHYTLY
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
FVIGWSAIMFIPDWFRNDKPLLGWIVGGGIVYTLGMIPFVKDTKGMHFIWHIFVMLGAAL
HHHHHHHHHHCCHHHCCCCCEEEHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
HWFGMYLYVY
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]