| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925686
Identifier: 238925686
GI number: 238925686
Start: 3164913
End: 3166208
Strand: Reverse
Name: 238925686
Synonym: EUBREC_3343
Alternate gene names: NA
Gene position: 3166208-3164913 (Counterclockwise)
Preceding gene: 238925687
Following gene: 238925685
Centisome position: 91.78
GC content: 45.6
Gene sequence:
>1296_bases ATGAGCAGATTACTTATTATCGGATGTGGTGGAGTTGCGCAGGTGGCAATCAGAAAATGCTGCCAGAACAGCGAGGTATT TACCGAGATTATGATTGCAAGCAGAACCAAGTCAAAATGTGATGACTTAAAGGCAAAGCTTGAGGGAAAGACAAGCACAA AAATTGAGACTGCAAAGGTTGATGCCGACAATGTGGAGGAATTAAAAGAGCTGATTAATGCATACAAGCCGGATGCGGTT TTAAATGTTGCGCTTCCGTATCAGGATCTTACAATCATGGATGCATGTCTTGTGTGTGGTGTTGACTACATCGATACTGC CAACTATGAGTGTGAGGATACTGAGGATCCAAAGTGGAGAGCAATCTACGAAAAGCGCTGCAAGGAGCTTGGATTTACGG CATATTTTGATTATTCATGGCAGTGGGCATATCAGGAGAAATTTAAGGAGGCAGGGCTTACAGCTATTCTTGGAAGCGGA TTTGACCCGGGTGTGACCTCTGTTTATTCTGCATATGCGCTGAAGCATTATTTTGATGAAATACATACTATAGACATTCT CGACTGCAATGGCGGGGACCATGGATATCCGTTTGCGACAAACTTTAATCCGGAGATAAATCTGCGTGAGGTTTCTGCGA ACGGCTCATACTGGACAGACGGCCACTGGGTAGAGACAAAGCCTATGGAGTGGAGGGCGCAGTACAATTTTGACCAGGTC GGAGAAAAGGATATGTATCTGCTTCACCACGAGGAGATTGAGTCGCTCGCCAAAAATATTCCGGGAATAAAGAGAATCAG ATTCTTCATGACCTTTGGACAGAGCTATCTCACACATATGAAGTGTCTTGAGGATGTAGGCATGCTAAGGACAGACCCGA TTATGGTGGACGGAAAGGAAATAGTGCCAATACAGGTGCTTAAGGAGCTGCTTCCTGACCCTGCATCCCTGGGACCTCGT ACAGTCGGAAAGACAAATATCGGATGTATTTTTACAGGTGTCAAGGATGGCAAAGAAAAATCAATCTACATCTATAATGT ATGTGACCATCAGGAGTGCTACAAGGAGGTTGAGTCGCAGGCGATTTCTTATACCACAGGTGTGCCGGCAATGATTGGTG CCATGATGGTGGTAAAGGGACTCTGGAAGAAGCCGGGAGTGTTCAATCTCGAGGAGATGGATCCGGATCCATACATGGAG GCTCTTAATAAGTTCGGACTGCCTTGGCAGGTAGTGGAGAATCCGGTTCCTGTGGATTGCTACAAGACTGAGGATGAGTC AGTACATATGGATTAG
Upstream 100 bases:
>100_bases GCTTCCGAAATATGTGGAGGATTTACTCGAGGAAGAGGAAACAAAGTAAAACAAATTAGAAAAACTATATCATAACCAAA GCGAATCAGGAGGGACAAAA
Downstream 100 bases:
>100_bases TCCGGAGGCCGGTATGAAGATAAATGAATTAAGAACTCCCTGTTATGTGATAGACGAGGGAAAATTAACTGAAAATCTTT TGATATTAAACGGTGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein; Carboxynorspermide Hydratase
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSRLLIIGCGGVAQVAIRKCCQNSEVFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAKVDADNVEELKELINAYKPDAV LNVALPYQDLTIMDACLVCGVDYIDTANYECEDTEDPKWRAIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTAILGSG FDPGVTSVYSAYALKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSANGSYWTDGHWVETKPMEWRAQYNFDQV GEKDMYLLHHEEIESLAKNIPGIKRIRFFMTFGQSYLTHMKCLEDVGMLRTDPIMVDGKEIVPIQVLKELLPDPASLGPR TVGKTNIGCIFTGVKDGKEKSIYIYNVCDHQECYKEVESQAISYTTGVPAMIGAMMVVKGLWKKPGVFNLEEMDPDPYME ALNKFGLPWQVVENPVPVDCYKTEDESVHMD
Sequences:
>Translated_431_residues MSRLLIIGCGGVAQVAIRKCCQNSEVFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAKVDADNVEELKELINAYKPDAV LNVALPYQDLTIMDACLVCGVDYIDTANYECEDTEDPKWRAIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTAILGSG FDPGVTSVYSAYALKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSANGSYWTDGHWVETKPMEWRAQYNFDQV GEKDMYLLHHEEIESLAKNIPGIKRIRFFMTFGQSYLTHMKCLEDVGMLRTDPIMVDGKEIVPIQVLKELLPDPASLGPR TVGKTNIGCIFTGVKDGKEKSIYIYNVCDHQECYKEVESQAISYTTGVPAMIGAMMVVKGLWKKPGVFNLEEMDPDPYME ALNKFGLPWQVVENPVPVDCYKTEDESVHMD >Mature_430_residues SRLLIIGCGGVAQVAIRKCCQNSEVFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAKVDADNVEELKELINAYKPDAVL NVALPYQDLTIMDACLVCGVDYIDTANYECEDTEDPKWRAIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTAILGSGF DPGVTSVYSAYALKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSANGSYWTDGHWVETKPMEWRAQYNFDQVG EKDMYLLHHEEIESLAKNIPGIKRIRFFMTFGQSYLTHMKCLEDVGMLRTDPIMVDGKEIVPIQVLKELLPDPASLGPRT VGKTNIGCIFTGVKDGKEKSIYIYNVCDHQECYKEVESQAISYTTGVPAMIGAMMVVKGLWKKPGVFNLEEMDPDPYMEA LNKFGLPWQVVENPVPVDCYKTEDESVHMD
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48796; Mature: 48665
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLIIGCGGVAQVAIRKCCQNSEVFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAKV CCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEC DADNVEELKELINAYKPDAVLNVALPYQDLTIMDACLVCGVDYIDTANYECEDTEDPKWR CCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHH AIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTAILGSGFDPGVTSVYSAYALKHYFDE HHHHHHHHHCCCEEEECCCEEEHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH IHTIDILDCNGGDHGYPFATNFNPEINLREVSANGSYWTDGHWVETKPMEWRAQYNFDQV HCEEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCHHHC GEKDMYLLHHEEIESLAKNIPGIKRIRFFMTFGQSYLTHMKCLEDVGMLRTDPIMVDGKE CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC IVPIQVLKELLPDPASLGPRTVGKTNIGCIFTGVKDGKEKSIYIYNVCDHQECYKEVESQ CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH AISYTTGVPAMIGAMMVVKGLWKKPGVFNLEEMDPDPYMEALNKFGLPWQVVENPVPVDC HEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCHHHHCCCCCCEE YKTEDESVHMD EECCCCCCCCC >Mature Secondary Structure SRLLIIGCGGVAQVAIRKCCQNSEVFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAKV CCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEC DADNVEELKELINAYKPDAVLNVALPYQDLTIMDACLVCGVDYIDTANYECEDTEDPKWR CCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHH AIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTAILGSGFDPGVTSVYSAYALKHYFDE HHHHHHHHHCCCEEEECCCEEEHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH IHTIDILDCNGGDHGYPFATNFNPEINLREVSANGSYWTDGHWVETKPMEWRAQYNFDQV HCEEEEEECCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCHHHC GEKDMYLLHHEEIESLAKNIPGIKRIRFFMTFGQSYLTHMKCLEDVGMLRTDPIMVDGKE CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC IVPIQVLKELLPDPASLGPRTVGKTNIGCIFTGVKDGKEKSIYIYNVCDHQECYKEVESQ CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH AISYTTGVPAMIGAMMVVKGLWKKPGVFNLEEMDPDPYMEALNKFGLPWQVVENPVPVDC HEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCHHHHCCCCCCEE YKTEDESVHMD EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA