Click here to switch to the map view.

The map label for this gene is 238925566

Identifier: 238925566

GI number: 238925566

Start: 3065159

End: 3065935

Strand: Direct

Name: 238925566

Synonym: EUBREC_3222

Alternate gene names: NA

Gene position: 3065159-3065935 (Clockwise)

Preceding gene: 238925565

Following gene: 238925567

Centisome position: 88.85

GC content: 42.34

Gene sequence:

>777_bases
ATGACAAATCAGAGTACAATAGATAAACTTATTGAAATGCGCCTTACCACAATGGCAGATGCATTCCGTAACCAGCTTGA
CGATCCGAAATTCAAGGAAGTTCCTTTTGAAGACCGCTTTGGAATGCTAGTAGATATCGAATACAGCAACCGCAAGAATA
ACCGCCAGAAGCGTCTTATCCGCAACGCCGGATTCGATCAGCCGGAAGCAAGTATCATGGATATCAACTATACTTCCGGG
CGCAAGCTGAACAAGGATCTGATAAACAGACTTGCCACCTGCGAATATATATCTGAACACCGGAATCTTTTTATTACCGG
TGCAACAGGCTGTGGTAAAACATACATGGCATGTGCATTCGGCATGGAAGCCTGCAAGCAGTATTACAACACCAGGTATG
TCCGTATGCCAGACTTACTCATGGATCTGGATATTGCACGAACTGAAGGAAACTACCGTAAAGTTATAGCAAAATATTCC
AATCCGGTACTTCTCATTCTGGATGAATGGATGCTTCTCAAACCAACAGATATAGAGCAGAAAGATATCTTTGAACTTCT
TCATCGCAGACGTAAGAAATCATCAACTATCTTCTGTTCACAGTATGTGTTTGAGGAATGGTATGATCAGCTTGGAGGAG
AAGCAAGTCCTCTAGCCGATGCAATCATTGACCGTATTGCTTATGACAGCTATCAGATTAACATCACAAGCATTGATGCT
GAGCATGACAGATCCATGCGTGAGGTTTATGGCTTGGATAAATCAATGCGAAATTAA

Upstream 100 bases:

>100_bases
TGGTTCTGTAAAAACGGAGCCAGAATCATCTGGATCCAAGACCACACATAAAGCACACGGCATCACAAGAGGTGCCGACT
ACTATCGGAGGTAATCACAT

Downstream 100 bases:

>100_bases
ACTTGCATAGATGATTTCCACTTCCGGACATCTGATTTCCAAATTTCCGGAAGTGCGATTTCATCGCACAAGAATATTCA
AATACAGCAAAGGATATCTC

Product: possible transposase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTNQSTIDKLIEMRLTTMADAFRNQLDDPKFKEVPFEDRFGMLVDIEYSNRKNNRQKRLIRNAGFDQPEASIMDINYTSG
RKLNKDLINRLATCEYISEHRNLFITGATGCGKTYMACAFGMEACKQYYNTRYVRMPDLLMDLDIARTEGNYRKVIAKYS
NPVLLILDEWMLLKPTDIEQKDIFELLHRRRKKSSTIFCSQYVFEEWYDQLGGEASPLADAIIDRIAYDSYQINITSIDA
EHDRSMREVYGLDKSMRN

Sequences:

>Translated_258_residues
MTNQSTIDKLIEMRLTTMADAFRNQLDDPKFKEVPFEDRFGMLVDIEYSNRKNNRQKRLIRNAGFDQPEASIMDINYTSG
RKLNKDLINRLATCEYISEHRNLFITGATGCGKTYMACAFGMEACKQYYNTRYVRMPDLLMDLDIARTEGNYRKVIAKYS
NPVLLILDEWMLLKPTDIEQKDIFELLHRRRKKSSTIFCSQYVFEEWYDQLGGEASPLADAIIDRIAYDSYQINITSIDA
EHDRSMREVYGLDKSMRN
>Mature_257_residues
TNQSTIDKLIEMRLTTMADAFRNQLDDPKFKEVPFEDRFGMLVDIEYSNRKNNRQKRLIRNAGFDQPEASIMDINYTSGR
KLNKDLINRLATCEYISEHRNLFITGATGCGKTYMACAFGMEACKQYYNTRYVRMPDLLMDLDIARTEGNYRKVIAKYSN
PVLLILDEWMLLKPTDIEQKDIFELLHRRRKKSSTIFCSQYVFEEWYDQLGGEASPLADAIIDRIAYDSYQINITSIDAE
HDRSMREVYGLDKSMRN

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 30210; Mature: 30079

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQSTIDKLIEMRLTTMADAFRNQLDDPKFKEVPFEDRFGMLVDIEYSNRKNNRQKRLI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
RNAGFDQPEASIMDINYTSGRKLNKDLINRLATCEYISEHRNLFITGATGCGKTYMACAF
HHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
GMEACKQYYNTRYVRMPDLLMDLDIARTEGNYRKVIAKYSNPVLLILDEWMLLKPTDIEQ
HHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCEEECCCCCCH
KDIFELLHRRRKKSSTIFCSQYVFEEWYDQLGGEASPLADAIIDRIAYDSYQINITSIDA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECC
EHDRSMREVYGLDKSMRN
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNQSTIDKLIEMRLTTMADAFRNQLDDPKFKEVPFEDRFGMLVDIEYSNRKNNRQKRLI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
RNAGFDQPEASIMDINYTSGRKLNKDLINRLATCEYISEHRNLFITGATGCGKTYMACAF
HHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
GMEACKQYYNTRYVRMPDLLMDLDIARTEGNYRKVIAKYSNPVLLILDEWMLLKPTDIEQ
HHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCEEECCCCCCH
KDIFELLHRRRKKSSTIFCSQYVFEEWYDQLGGEASPLADAIIDRIAYDSYQINITSIDA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECC
EHDRSMREVYGLDKSMRN
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]