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The map label for this gene is resD [H]

Identifier: 238925262

GI number: 238925262

Start: 2796482

End: 2797183

Strand: Direct

Name: resD [H]

Synonym: EUBREC_2916

Alternate gene names: 238925262

Gene position: 2796482-2797183 (Clockwise)

Preceding gene: 238925261

Following gene: 238925263

Centisome position: 81.06

GC content: 48.01

Gene sequence:

>702_bases
ATGGCTGTTAAACAGAAAATACTGATAGTAGACGACGACAACAATATAGCAGAGCTTATATCTCTATATCTGACCAAGGA
ATGCTATGACACCAAAATCGTAAATGACGGTGAGCAGGCGCTTATCGCATTTGAGCACTACAAGCCAAACATGCTTCTTT
TGGACCTCATGCTTCCGGGCATAGACGGCTATCAGGTATGCCGTGAGATACGTGCAAAGTCCGATGTGCCGATTATCATG
CTCTCCGCAAAGGGCGAGGTATTTGACAAGGTTTTAGGCCTGGAGCTTGGCGCCGACGACTATATACTCAAGCCCTTTGA
CTCAAAGGAGCTTGTGGCAAGAGTCAAGGCCGTGCTCAGACGCTTCCAGCCTGCAAAGCCGGAGGCCTATGCTTCCGTAG
ATATCAAGTGTGTGGAGTACCCGGGGCTTATTGTAAATCTGTCCAACTACTCTGTCACTTATGACGGACAGCAGATTGAT
ATGCCGCCAAAGGAGCTTGAGCTTTTATATTTTCTTGCCTCATCTCCAAATCAGGTGTTTACAAGGGAGCAGCTTCTGGA
CAACATATGGGGCTATGAATATGTCGGCGACACCCGCACTGTCGATGTGCATGTAAAGCGTCTCCGCGAGAAAATCAAGG
ACAAGCCAACCTGGCGCATCGCAACTGTCTGGGGCATCGGATACAAGTTTGAGGTAAAATAA

Upstream 100 bases:

>100_bases
TGAGTTTGGTGAGGGCGATGCCGGAGTAACCATCGCAACCTTTAAATAACGACAATTTACTTTTACGGAATATAAATAAT
TTTTAAGAAGGAGATTAGAA

Downstream 100 bases:

>100_bases
ATAATGAAACATACCATCTACACTAAGCTGTTAATCAGCTACCTGATTTACGGTGTCATCGCTTTTTTCATTATATGCAC
ATTTACACAGCATCTCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAVKQKILIVDDDNNIAELISLYLTKECYDTKIVNDGEQALIAFEHYKPNMLLLDLMLPGIDGYQVCREIRAKSDVPIIM
LSAKGEVFDKVLGLELGADDYILKPFDSKELVARVKAVLRRFQPAKPEAYASVDIKCVEYPGLIVNLSNYSVTYDGQQID
MPPKELELLYFLASSPNQVFTREQLLDNIWGYEYVGDTRTVDVHVKRLREKIKDKPTWRIATVWGIGYKFEVK

Sequences:

>Translated_233_residues
MAVKQKILIVDDDNNIAELISLYLTKECYDTKIVNDGEQALIAFEHYKPNMLLLDLMLPGIDGYQVCREIRAKSDVPIIM
LSAKGEVFDKVLGLELGADDYILKPFDSKELVARVKAVLRRFQPAKPEAYASVDIKCVEYPGLIVNLSNYSVTYDGQQID
MPPKELELLYFLASSPNQVFTREQLLDNIWGYEYVGDTRTVDVHVKRLREKIKDKPTWRIATVWGIGYKFEVK
>Mature_232_residues
AVKQKILIVDDDNNIAELISLYLTKECYDTKIVNDGEQALIAFEHYKPNMLLLDLMLPGIDGYQVCREIRAKSDVPIIML
SAKGEVFDKVLGLELGADDYILKPFDSKELVARVKAVLRRFQPAKPEAYASVDIKCVEYPGLIVNLSNYSVTYDGQQIDM
PPKELELLYFLASSPNQVFTREQLLDNIWGYEYVGDTRTVDVHVKRLREKIKDKPTWRIATVWGIGYKFEVK

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=41.0480349344978, Blast_Score=181, Evalue=2e-47,
Organism=Escherichia coli, GI1786599, Length=235, Percent_Identity=37.8723404255319, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=38.695652173913, Blast_Score=165, Evalue=2e-42,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=36.283185840708, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=37.6106194690265, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=35.3711790393013, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=30.8370044052863, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1790860, Length=239, Percent_Identity=32.2175732217573, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=31.5555555555556, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=34.9137931034483, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=30.8370044052863, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.9285714285714, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=31.0043668122271, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=26.9565217391304, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=34.8837209302326, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790299, Length=118, Percent_Identity=29.6610169491525, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26685; Mature: 26554

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKQKILIVDDDNNIAELISLYLTKECYDTKIVNDGEQALIAFEHYKPNMLLLDLMLPG
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEEEEEEECCC
IDGYQVCREIRAKSDVPIIMLSAKGEVFDKVLGLELGADDYILKPFDSKELVARVKAVLR
CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCEEECCCCCEECCCCCHHHHHHHHHHHH
RFQPAKPEAYASVDIKCVEYPGLIVNLSNYSVTYDGQQIDMPPKELELLYFLASSPNQVF
HCCCCCCCCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCHHHEEEEEEEECCCCHHH
TREQLLDNIWGYEYVGDTRTVDVHVKRLREKIKDKPTWRIATVWGIGYKFEVK
HHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEC
>Mature Secondary Structure 
AVKQKILIVDDDNNIAELISLYLTKECYDTKIVNDGEQALIAFEHYKPNMLLLDLMLPG
CCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEEEEEEECCC
IDGYQVCREIRAKSDVPIIMLSAKGEVFDKVLGLELGADDYILKPFDSKELVARVKAVLR
CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCEEECCCCCEECCCCCHHHHHHHHHHHH
RFQPAKPEAYASVDIKCVEYPGLIVNLSNYSVTYDGQQIDMPPKELELLYFLASSPNQVF
HCCCCCCCCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCHHHEEEEEEEECCCCHHH
TREQLLDNIWGYEYVGDTRTVDVHVKRLREKIKDKPTWRIATVWGIGYKFEVK
HHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]