| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is secA [H]
Identifier: 238925136
GI number: 238925136
Start: 2668992
End: 2671562
Strand: Reverse
Name: secA [H]
Synonym: EUBREC_2789
Alternate gene names: 238925136
Gene position: 2671562-2668992 (Counterclockwise)
Preceding gene: 238925138
Following gene: 238925135
Centisome position: 77.44
GC content: 46.6
Gene sequence:
>2571_bases ATGAGCGCATTTTCAAAAATCTTTGGTTCTCACAGCGAGAGAGAGCTTAAGAGAATTTACCCGATTGCTGACAAGGTTGA GTCATATAAGGAAGCAATGGGAAAGCTTTCCGATGAAGAATTAAAGGATAAGACAAGGGAGTTTAAAAAGCGTCTGGAGG ACGGAGCAACACTTGATGATATTCTTCCGGAGGCATTTGCTACAGTAAGAGAGGCTGCTAAGCGTGTGCTTGGCATGGAA CATTATAGAGTACAGATAATCGGTGGTATTATTTTGCATCAGGGACGTATTGCAGAGATGCGAACCGGTGAAGGTAAGAC ACTTGTTTCTACACTTCCTGCATACCTTAATGCACTTGAGGGCAAGGGTGTGTGTATTGTCACAGTCAATGATTACCTTG CAAAGCGTGATGCTGAGTGGATGGGACAGGTTCATGAGTTCTTAGGGCTTAAGGTCGGCGTGGTACTTGGCGGCATGGAC AATGACGAGCGCAGGGAGGCTTACGGCTGTGATATTACATATATCACAAACAATGAGCTTGGATTTGATTACCTGCGTGA CAATATGGTTATCTACAAGGAACAGCTTGTTCAGAGAGGTCTCCACTATGCTATCATCGATGAGGTCGATTCAGTGCTTA TCGATGAGGCACGTACACCTCTTATCATTTCAGGACAGAGTGGCAAGTCGACAAGACTTTACGAGGCATGCGATATCCTG GCTACACAGATGAAGCGTGGTGAGGATGTTCCTGAGTATTCAAAGATGGATGCCATCATGGGCATTGTCCAGGACGAGAC AGGTGATTTCATCGTAAATGAGAAGGACAAGGTCGTAAACCTTACACAGGATGGTGTGAAAAAGGTAGAACAGTTCTTCC ATATCGAGAACCTTGCAGATCCGGAGAATCTTGAAATCCAGCACAATATCATACTTGCGCTTCGTGCGCACAACCTCATG TTCAAAGATCAGGACTATGTGGTAAAGGATGATGAGGTGCTTATCGTAGATGAGTTTACCGGACGTATCATGCCTGGACG CCGTTATTCGGACGGACTGCATCAGGCTATCGAGGCAAAGGAGCATGTAAAGGTTAAGAGAGAGAGCAAGACCCTTGCCA CAATCACATTCCAGAACTTCTTCAACAAGTTTGACAAGAAGGCCGGTATGACAGGTACAGCTCTCACAGAGGAAAAAGAG TTCCGTGATATCTATGGCATGGATGTTGTCGAGATACCTACAAATAAGCCGGTAGCGCGTATTGATTTACAGGATGCTGT ATACGCTACCAAAAAGGAAAAGTTCAAGGCAGTTGTGGATGCGGTTAAAGAGGCACATGAAAAGGGACAGCCTGTTCTTG TAGGTACAATTACCATCGAGACATCAGAGCTTTTGAGCGGCATGCTCAAGAGAGAGGGAATCCCTCACACAGTATTAAAT GCCAAGTTCCATGAGAAAGAGGCAGAGATTGTTGCACTTGCAGGACAGCACGGTGCAGTTACAATAGCAACCAACATGGC AGGCCGTGGTACCGATATTAAGCTTGACGATGAGGCAAAGGCTGCCGGAGGTCTTAAGATTATCGGTACAGAACGCCATG AGTCAAGACGTATAGACAATCAGCTCCGTGGACGTGCAGGACGTCAGGGAGATCCGGGTGAGTCACAGTTCTTCATCTCA CTCGAGGATGACCTCATGAGACTTTTCGGTTCGGAGCGTCTGATGGGCGTTTTCAATGCTCTCGGAGTACCGGAGGGCGA GCAGATCCAGCATAAGATGCTCACATCTGCTATCGAGAAGGCTCAGGAGAAAATCGAGGCCAACAACTTTGGTATTCGTA AAAATCTTCTCGAGTATGACCAGGTGGACAATGACCAGAGAGAGATTATCTACAGCGAGCGTATGAAGGTGCTTAACGGT GACAACATGCGTGATGCTATCCTTAAGATGGTTCAGGAGCAGGTTGAGAAGTCTGTCGACAGATGTATTTCCGAGGAAAT TGACAGAGCTGACTGGGATCTTGTAGAGCTCAACGAGCTTGTGCTTCCGGTCATTCCTCTTGATCCGATTACAAAAGAGG ATATTGAGTCAATCAAGAATGCAAAGCAGCTTAAGCAGTACTTAAAGGAAAAGGCCGTCATGCTTTATGAGCAGAAGGAG ACAGAATTCCCTGAGCCTGAGCAGTTCAGAGAGATTGAGCGTGTCGTGCTTCTTCGTGTAATCGACAGAAAGTGGATGGA TCACATCGATGATATGGCACAGCTTCGTCAGGGAATCGGCTTACAGGCTTATGGACAGAAAGATCCAATCGTAGAGTACA AGATGGCAGGCTTTGATATGTTTGACGACATGATTTCAGCTATCCAGGAGGATACTGTCAGACTGCTGTATCATGTACAG GTTGAGCAGAAGGTTGAGCGAGAGCAGGTTGCAAAGATTTCGGGCACAAACAAGGATGAGTCAGCACAGAATGCACCAAA GCGCCGTGCAGCAGCCAAGGTATATCCGAATGACCCATGTCCATGCGGCAGTGGCAAGAAATATAAGCAGTGCTGTGGAC GTGTGAAGTAA
Upstream 100 bases:
>100_bases AAAACATTCATCCCTTTAGGTTGTGCAATCATCCTCAAAGTGTTACAATAACACTATTGTGAGCCTGTACAAGGGCAATT TGAAGTTATAGGAGAAAAAT
Downstream 100 bases:
>100_bases ATTTTAAATGGCTGTAATCGTTGCTGGTCACACTGTTAGGTGTGAACAGTAACATAAAATAAATAAACAAGAACGAATGT TCTGAAAATTGTGGACAGAG
Product: protein translocase subunit secA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MSAFSKIFGSHSERELKRIYPIADKVESYKEAMGKLSDEELKDKTREFKKRLEDGATLDDILPEAFATVREAAKRVLGME HYRVQIIGGIILHQGRIAEMRTGEGKTLVSTLPAYLNALEGKGVCIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLGGMD NDERREAYGCDITYITNNELGFDYLRDNMVIYKEQLVQRGLHYAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDIL ATQMKRGEDVPEYSKMDAIMGIVQDETGDFIVNEKDKVVNLTQDGVKKVEQFFHIENLADPENLEIQHNIILALRAHNLM FKDQDYVVKDDEVLIVDEFTGRIMPGRRYSDGLHQAIEAKEHVKVKRESKTLATITFQNFFNKFDKKAGMTGTALTEEKE FRDIYGMDVVEIPTNKPVARIDLQDAVYATKKEKFKAVVDAVKEAHEKGQPVLVGTITIETSELLSGMLKREGIPHTVLN AKFHEKEAEIVALAGQHGAVTIATNMAGRGTDIKLDDEAKAAGGLKIIGTERHESRRIDNQLRGRAGRQGDPGESQFFIS LEDDLMRLFGSERLMGVFNALGVPEGEQIQHKMLTSAIEKAQEKIEANNFGIRKNLLEYDQVDNDQREIIYSERMKVLNG DNMRDAILKMVQEQVEKSVDRCISEEIDRADWDLVELNELVLPVIPLDPITKEDIESIKNAKQLKQYLKEKAVMLYEQKE TEFPEPEQFREIERVVLLRVIDRKWMDHIDDMAQLRQGIGLQAYGQKDPIVEYKMAGFDMFDDMISAIQEDTVRLLYHVQ VEQKVEREQVAKISGTNKDESAQNAPKRRAAAKVYPNDPCPCGSGKKYKQCCGRVK
Sequences:
>Translated_856_residues MSAFSKIFGSHSERELKRIYPIADKVESYKEAMGKLSDEELKDKTREFKKRLEDGATLDDILPEAFATVREAAKRVLGME HYRVQIIGGIILHQGRIAEMRTGEGKTLVSTLPAYLNALEGKGVCIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLGGMD NDERREAYGCDITYITNNELGFDYLRDNMVIYKEQLVQRGLHYAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDIL ATQMKRGEDVPEYSKMDAIMGIVQDETGDFIVNEKDKVVNLTQDGVKKVEQFFHIENLADPENLEIQHNIILALRAHNLM FKDQDYVVKDDEVLIVDEFTGRIMPGRRYSDGLHQAIEAKEHVKVKRESKTLATITFQNFFNKFDKKAGMTGTALTEEKE FRDIYGMDVVEIPTNKPVARIDLQDAVYATKKEKFKAVVDAVKEAHEKGQPVLVGTITIETSELLSGMLKREGIPHTVLN AKFHEKEAEIVALAGQHGAVTIATNMAGRGTDIKLDDEAKAAGGLKIIGTERHESRRIDNQLRGRAGRQGDPGESQFFIS LEDDLMRLFGSERLMGVFNALGVPEGEQIQHKMLTSAIEKAQEKIEANNFGIRKNLLEYDQVDNDQREIIYSERMKVLNG DNMRDAILKMVQEQVEKSVDRCISEEIDRADWDLVELNELVLPVIPLDPITKEDIESIKNAKQLKQYLKEKAVMLYEQKE TEFPEPEQFREIERVVLLRVIDRKWMDHIDDMAQLRQGIGLQAYGQKDPIVEYKMAGFDMFDDMISAIQEDTVRLLYHVQ VEQKVEREQVAKISGTNKDESAQNAPKRRAAAKVYPNDPCPCGSGKKYKQCCGRVK >Mature_855_residues SAFSKIFGSHSERELKRIYPIADKVESYKEAMGKLSDEELKDKTREFKKRLEDGATLDDILPEAFATVREAAKRVLGMEH YRVQIIGGIILHQGRIAEMRTGEGKTLVSTLPAYLNALEGKGVCIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLGGMDN DERREAYGCDITYITNNELGFDYLRDNMVIYKEQLVQRGLHYAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDILA TQMKRGEDVPEYSKMDAIMGIVQDETGDFIVNEKDKVVNLTQDGVKKVEQFFHIENLADPENLEIQHNIILALRAHNLMF KDQDYVVKDDEVLIVDEFTGRIMPGRRYSDGLHQAIEAKEHVKVKRESKTLATITFQNFFNKFDKKAGMTGTALTEEKEF RDIYGMDVVEIPTNKPVARIDLQDAVYATKKEKFKAVVDAVKEAHEKGQPVLVGTITIETSELLSGMLKREGIPHTVLNA KFHEKEAEIVALAGQHGAVTIATNMAGRGTDIKLDDEAKAAGGLKIIGTERHESRRIDNQLRGRAGRQGDPGESQFFISL EDDLMRLFGSERLMGVFNALGVPEGEQIQHKMLTSAIEKAQEKIEANNFGIRKNLLEYDQVDNDQREIIYSERMKVLNGD NMRDAILKMVQEQVEKSVDRCISEEIDRADWDLVELNELVLPVIPLDPITKEDIESIKNAKQLKQYLKEKAVMLYEQKET EFPEPEQFREIERVVLLRVIDRKWMDHIDDMAQLRQGIGLQAYGQKDPIVEYKMAGFDMFDDMISAIQEDTVRLLYHVQV EQKVEREQVAKISGTNKDESAQNAPKRRAAAKVYPNDPCPCGSGKKYKQCCGRVK
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=906, Percent_Identity=48.4547461368653, Blast_Score=805, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 97051; Mature: 96920
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFSKIFGSHSERELKRIYPIADKVESYKEAMGKLSDEELKDKTREFKKRLEDGATLDD CCHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH ILPEAFATVREAAKRVLGMEHYRVQIIGGIILHQGRIAEMRTGEGKTLVSTLPAYLNALE HHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHC GKGVCIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLGGMDNDERREAYGCDITYITNNEL CCCEEEEEECHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEEECCCC GFDYLRDNMVIYKEQLVQRGLHYAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDIL CHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHH ATQMKRGEDVPEYSKMDAIMGIVQDETGDFIVNEKDKVVNLTQDGVKKVEQFFHIENLAD HHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCC PENLEIQHNIILALRAHNLMFKDQDYVVKDDEVLIVDEFTGRIMPGRRYSDGLHQAIEAK CCCCEEEEEEEEEEEECCEEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EHVKVKRESKTLATITFQNFFNKFDKKAGMTGTALTEEKEFRDIYGMDVVEIPTNKPVAR HHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEE IDLQDAVYATKKEKFKAVVDAVKEAHEKGQPVLVGTITIETSELLSGMLKREGIPHTVLN EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHCCCCCHHHC AKFHEKEAEIVALAGQHGAVTIATNMAGRGTDIKLDDEAKAAGGLKIIGTERHESRRIDN CHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCCHHCCCCEEEEECCCHHHHHHHH QLRGRAGRQGDPGESQFFISLEDDLMRLFGSERLMGVFNALGVPEGEQIQHKMLTSAIEK HHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AQEKIEANNFGIRKNLLEYDQVDNDQREIIYSERMKVLNGDNMRDAILKMVQEQVEKSVD HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RCISEEIDRADWDLVELNELVLPVIPLDPITKEDIESIKNAKQLKQYLKEKAVMLYEQKE HHHHHHHCCCCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC TEFPEPEQFREIERVVLLRVIDRKWMDHIDDMAQLRQGIGLQAYGQKDPIVEYKMAGFDM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCCHHH FDDMISAIQEDTVRLLYHVQVEQKVEREQVAKISGTNKDESAQNAPKRRAAAKVYPNDPC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCC PCGSGKKYKQCCGRVK CCCCCCHHHHHCCCCC >Mature Secondary Structure SAFSKIFGSHSERELKRIYPIADKVESYKEAMGKLSDEELKDKTREFKKRLEDGATLDD CHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH ILPEAFATVREAAKRVLGMEHYRVQIIGGIILHQGRIAEMRTGEGKTLVSTLPAYLNALE HHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHC GKGVCIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLGGMDNDERREAYGCDITYITNNEL CCCEEEEEECHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEEECCCC GFDYLRDNMVIYKEQLVQRGLHYAIIDEVDSVLIDEARTPLIISGQSGKSTRLYEACDIL CHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHH ATQMKRGEDVPEYSKMDAIMGIVQDETGDFIVNEKDKVVNLTQDGVKKVEQFFHIENLAD HHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCC PENLEIQHNIILALRAHNLMFKDQDYVVKDDEVLIVDEFTGRIMPGRRYSDGLHQAIEAK CCCCEEEEEEEEEEEECCEEECCCCCEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EHVKVKRESKTLATITFQNFFNKFDKKAGMTGTALTEEKEFRDIYGMDVVEIPTNKPVAR HHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEE IDLQDAVYATKKEKFKAVVDAVKEAHEKGQPVLVGTITIETSELLSGMLKREGIPHTVLN EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHCCCCCHHHC AKFHEKEAEIVALAGQHGAVTIATNMAGRGTDIKLDDEAKAAGGLKIIGTERHESRRIDN CHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCCHHCCCCEEEEECCCHHHHHHHH QLRGRAGRQGDPGESQFFISLEDDLMRLFGSERLMGVFNALGVPEGEQIQHKMLTSAIEK HHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AQEKIEANNFGIRKNLLEYDQVDNDQREIIYSERMKVLNGDNMRDAILKMVQEQVEKSVD HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RCISEEIDRADWDLVELNELVLPVIPLDPITKEDIESIKNAKQLKQYLKEKAVMLYEQKE HHHHHHHCCCCCCHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC TEFPEPEQFREIERVVLLRVIDRKWMDHIDDMAQLRQGIGLQAYGQKDPIVEYKMAGFDM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCCHHH FDDMISAIQEDTVRLLYHVQVEQKVEREQVAKISGTNKDESAQNAPKRRAAAKVYPNDPC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCCCCCCCCCC PCGSGKKYKQCCGRVK CCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA