| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925028
Identifier: 238925028
GI number: 238925028
Start: 2557876
End: 2559237
Strand: Reverse
Name: 238925028
Synonym: EUBREC_2679
Alternate gene names: NA
Gene position: 2559237-2557876 (Counterclockwise)
Preceding gene: 238925029
Following gene: 238925025
Centisome position: 74.19
GC content: 28.71
Gene sequence:
>1362_bases TTGCAAAACTTAATTGATAATAAAATTTTGTTGTATAACTCTGATAATACTATTTCTCCAATTCATGATATTGATTATAG GGATTTAGAGAACATCTTCGAAAACTCACCTTTTAGACCTATGTTTTCACAATATGCATATGAGTTTTTAAATGGAAAAA AGACTATTTTGGAAAAACAAAAATTACTCTGTAAACTTGCTCGTAATGCAGAAATTGTAGGTTGGGAACATCTCAATTTT CGTTATGGAAAAATGTTAGCACGAAACAAACAATATTATGATGCACAAAAGGTTTTTTCTTGTTTAAGTGCTTCGTTTAA TAAATTAAATATTATGAATGTAATTTTTATTGCAATAAACTCTTATCGAACAGGAGAGTATAACCTTGCAATAGAAGAAT TTAATACCATAGATTGGAATGAGTTACAATATAATAAAGTTAAATTTTATTATCTTTTTTATATTGGAAAAAGTTATAAT AATATAGGAAGAACTAAACAAGCAGCAGAAACATTGGAAGAGGCACTAAAATATGTTGAAACAAATAGTCGTGAATACGT GCAAACTCTGAATGTATTGCATATGTACTATTTTGAGATAAATGATACAGTAGACAAATCAAAAAAATATTTTAATATAA TAAAGAATGAGTATCGAGAAATGTTTCCAGATATTTGGGCAAATACTATGAGAGGTTGTCACAATTTTTTGAAATTTGAT GATGCCATAAATGTATTGTGTGAAGCAGAAAGACTATTAAATGATGAGTTAGAAATTGCATATATAAAGACAACAAAAGG ATTTCTTTATGCAAAAAATGATCAACTGTCTGATGCAAAGGAAATTTTTTATGAATCTTCCAGAACCATAAAAAAGCTTC GGCTTCATGAGTATTCATACGCTGCGAATAATTATGCAATCTGTTGCATGTTAGAGCAGAATTACCAAGAAGCAATAGAA GTACTTCAGGAGGCACTTCTATGGAATCGAACTGAGTATGGCAATATTGTATTACAAAATCATTTAATGGTGTGTACACT CTATTTGCATCAAGAGCAAGAAACAGAAAGATACTATAGTTTTTTAAAAAATTACGTGGAAAAATATTCTCAAATTGATA CTATAATGAAAAGAAAATTATATATTAATCTTGCCATTGTAAGCAATGAACTTAATTTAGAAATTGATAAAAATAGTTAT TTGAAACAATGTGAATCCTTAGTCAAGGGCACTTCTAGTGAATGGCGTTACTATTACTTATTGAATAATAACTCGAATAA TAATCCGATACCACGCCCCAAGGAACAATGTTCAAATACATTGTACTTCGAACCTTGGTTTTTAGTGTACGCGCATGATT AA
Upstream 100 bases:
>100_bases CATGATACAAAAATACCGCCCGTAGTCTCGTTTGGGCGGTACTTTGTGTAAGATTGGCAGTCCATTATTAAGTTTTTTAT TATGTTCCCTTTGTACACCG
Downstream 100 bases:
>100_bases TTCATGTTAATCGATCAAGAACAGTAGTTAAATAATATTGAACCATTTTAGAAAATAGAATATTGTTTTTTTGTGCAATA AATCCAATTTCACTTGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MQNLIDNKILLYNSDNTISPIHDIDYRDLENIFENSPFRPMFSQYAYEFLNGKKTILEKQKLLCKLARNAEIVGWEHLNF RYGKMLARNKQYYDAQKVFSCLSASFNKLNIMNVIFIAINSYRTGEYNLAIEEFNTIDWNELQYNKVKFYYLFYIGKSYN NIGRTKQAAETLEEALKYVETNSREYVQTLNVLHMYYFEINDTVDKSKKYFNIIKNEYREMFPDIWANTMRGCHNFLKFD DAINVLCEAERLLNDELEIAYIKTTKGFLYAKNDQLSDAKEIFYESSRTIKKLRLHEYSYAANNYAICCMLEQNYQEAIE VLQEALLWNRTEYGNIVLQNHLMVCTLYLHQEQETERYYSFLKNYVEKYSQIDTIMKRKLYINLAIVSNELNLEIDKNSY LKQCESLVKGTSSEWRYYYLLNNNSNNNPIPRPKEQCSNTLYFEPWFLVYAHD
Sequences:
>Translated_453_residues MQNLIDNKILLYNSDNTISPIHDIDYRDLENIFENSPFRPMFSQYAYEFLNGKKTILEKQKLLCKLARNAEIVGWEHLNF RYGKMLARNKQYYDAQKVFSCLSASFNKLNIMNVIFIAINSYRTGEYNLAIEEFNTIDWNELQYNKVKFYYLFYIGKSYN NIGRTKQAAETLEEALKYVETNSREYVQTLNVLHMYYFEINDTVDKSKKYFNIIKNEYREMFPDIWANTMRGCHNFLKFD DAINVLCEAERLLNDELEIAYIKTTKGFLYAKNDQLSDAKEIFYESSRTIKKLRLHEYSYAANNYAICCMLEQNYQEAIE VLQEALLWNRTEYGNIVLQNHLMVCTLYLHQEQETERYYSFLKNYVEKYSQIDTIMKRKLYINLAIVSNELNLEIDKNSY LKQCESLVKGTSSEWRYYYLLNNNSNNNPIPRPKEQCSNTLYFEPWFLVYAHD >Mature_453_residues MQNLIDNKILLYNSDNTISPIHDIDYRDLENIFENSPFRPMFSQYAYEFLNGKKTILEKQKLLCKLARNAEIVGWEHLNF RYGKMLARNKQYYDAQKVFSCLSASFNKLNIMNVIFIAINSYRTGEYNLAIEEFNTIDWNELQYNKVKFYYLFYIGKSYN NIGRTKQAAETLEEALKYVETNSREYVQTLNVLHMYYFEINDTVDKSKKYFNIIKNEYREMFPDIWANTMRGCHNFLKFD DAINVLCEAERLLNDELEIAYIKTTKGFLYAKNDQLSDAKEIFYESSRTIKKLRLHEYSYAANNYAICCMLEQNYQEAIE VLQEALLWNRTEYGNIVLQNHLMVCTLYLHQEQETERYYSFLKNYVEKYSQIDTIMKRKLYINLAIVSNELNLEIDKNSY LKQCESLVKGTSSEWRYYYLLNNNSNNNPIPRPKEQCSNTLYFEPWFLVYAHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54209; Mature: 54209
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLIDNKILLYNSDNTISPIHDIDYRDLENIFENSPFRPMFSQYAYEFLNGKKTILEKQ CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHH KLLCKLARNAEIVGWEHLNFRYGKMLARNKQYYDAQKVFSCLSASFNKLNIMNVIFIAIN HHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHEEEEEEEEE SYRTGEYNLAIEEFNTIDWNELQYNKVKFYYLFYIGKSYNNIGRTKQAAETLEEALKYVE CCCCCCEEEEEEECCCCCCCCCEECEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH TNSREYVQTLNVLHMYYFEINDTVDKSKKYFNIIKNEYREMFPDIWANTMRGCHNFLKFD CCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAINVLCEAERLLNDELEIAYIKTTKGFLYAKNDQLSDAKEIFYESSRTIKKLRLHEYSY HHHHHHHHHHHHCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC AANNYAICCMLEQNYQEAIEVLQEALLWNRTEYGNIVLQNHLMVCTLYLHQEQETERYYS CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCHHHHHHHH FLKNYVEKYSQIDTIMKRKLYINLAIVSNELNLEIDKNSYLKQCESLVKGTSSEWRYYYL HHHHHHHHHHHHHHHHHHEEEEEEEEEECCEEEEECCHHHHHHHHHHHCCCCCCEEEEEE LNNNSNNNPIPRPKEQCSNTLYFEPWFLVYAHD EECCCCCCCCCCCHHHHCCCEEECCEEEEEECC >Mature Secondary Structure MQNLIDNKILLYNSDNTISPIHDIDYRDLENIFENSPFRPMFSQYAYEFLNGKKTILEKQ CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHH KLLCKLARNAEIVGWEHLNFRYGKMLARNKQYYDAQKVFSCLSASFNKLNIMNVIFIAIN HHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHEEEEEEEEE SYRTGEYNLAIEEFNTIDWNELQYNKVKFYYLFYIGKSYNNIGRTKQAAETLEEALKYVE CCCCCCEEEEEEECCCCCCCCCEECEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH TNSREYVQTLNVLHMYYFEINDTVDKSKKYFNIIKNEYREMFPDIWANTMRGCHNFLKFD CCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAINVLCEAERLLNDELEIAYIKTTKGFLYAKNDQLSDAKEIFYESSRTIKKLRLHEYSY HHHHHHHHHHHHCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC AANNYAICCMLEQNYQEAIEVLQEALLWNRTEYGNIVLQNHLMVCTLYLHQEQETERYYS CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCHHHHHHHH FLKNYVEKYSQIDTIMKRKLYINLAIVSNELNLEIDKNSYLKQCESLVKGTSSEWRYYYL HHHHHHHHHHHHHHHHHHEEEEEEEEEECCEEEEECCHHHHHHHHHHHCCCCCCEEEEEE LNNNSNNNPIPRPKEQCSNTLYFEPWFLVYAHD EECCCCCCCCCCCHHHHCCCEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA