| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is pgcA [H]
Identifier: 238924964
GI number: 238924964
Start: 2491559
End: 2493289
Strand: Reverse
Name: pgcA [H]
Synonym: EUBREC_2615
Alternate gene names: 238924964
Gene position: 2493289-2491559 (Counterclockwise)
Preceding gene: 238924965
Following gene: 238924963
Centisome position: 72.28
GC content: 45.41
Gene sequence:
>1731_bases ATGGATTTTAGAGCGGAGTACGAGAAATGGTGTACAGACCCATATTTTGATGAGGCTACAAAGGCAGAGCTTAAGGCTAT CGCGGGTGATGATAAGGAGATAGAGGACAGATTCTATCGCACACTTGAGTTTGGTACAGCAGGTCTTCGTGGTGTAATAG GAGCCGGCACCAACAGGATGAATATATACACAGTCCGTCAGGCTACACAGGGATTGGCGAATTACATACTTTCACAGGGA GAGGACGCAGTAAAGAGAGGTGTTGCAATCGCACATGACTCACGTAATATGCATGATGAGTTCACAGATGCCACAGCACT CTGTCTTGCAGCTAACGGAATCAAGACATATGTATTCCCACAGCTCGCACCTGTTCCTGAGCTGTCATACGCAGTAAGGA CACTCGGTACAATAGCCGGTGTTGTTATCACAGCAAGCCACAATCCTCGTGAGTACAATGGATACAAGGTATACTGGGAG GATGGTGCACAGGTTACTCCACCTCATGATACAAGCATCATGGCTGAGGTGGCAAAGGTTACATCATTTGACCAGGTAAA GACTATGGACAAAGCTGCTGCTATTGAGGCTGGTCTTTACAATGTCATCTCTGATGAGGTTGAGGAGGGATATTTCGGAG AGCTCCGCAAGCTTTCTATCCATCCAGAGATTATCAAGGCTATGGCAAAGGATATCAAGATCGTTTACACACCACTCCAC GGCACAGGTCTTCGCCCTGTACAGAGAGTACTTAAGGATATGGGCTTTGAGAATGTATACATTGAGCCAAGCCAGGCAGT GCCTGATGGCAATTTCCCTACATGTCCTTATCCAAATCCTGAGAATCCTGATGCATGGAAGCTTGCACTTGAGCTGGCAA AGGAAAAGGATGCTGATATCGTTTTAGCAACTGACCCTGATGCCGACAGACTCGGTGTATACTGCAAGGATACAAAGACA GGTGAGTATGTGACATTTACAGGAAATATGTCAGCTATGCTTATCGGTGAGTATATTTTAAGCCAGAAGAGTGCCAATGG TACTCTGCCTGAGAATCCTGCATTTGTTGAGTCAATTGTTTCTACAGATATGGGTAAGGCAATTGCGGCAGCATATGGCG TAAAGCATATCGAGGTTTTAACAGGTTTCAAGTATATCGGAGAGCAGATGCTCAAATTTGAAAAAACCGGCTGCAACAAT TATGTATTCGGTATGGAGGAGAGCTACGGATGTCTGCCGGGCACATATGCAAGGGACAAGGATGCTCCTGCAGCAGTTTG TATGCTGTGTGAGGTGGCTGCCTTCTACAAGTCACAGGGCAAGACTCTCTGGGATGGCATGATTGACATGTACGAGAAGT ATGGCTACTACAGAGAGGGCATTTCCACAATGACCTTAAAGGGCATTGATGGTGCTGCACAGATAAATGAGATTATGACA AAGGCACGTGCCGCTGAGCCAAAGAAATTTGGTGATTATCAGGTGATTGCTATCCGTGATTACAAGAATGACACAAGAAA AGATATGACAACAGGAAAGGTTGAGCCGACAGGTCTTCCTTCTTCTAATGTACTTTACTACGAACTTAACGATAACGCTT GGTGCTGTGTACGCCCTTCTGGTACAGAGCCTAAGATTAAATTCTATTTCGGAGTTAAAGGAGTGTCTCTTGAAGATTCA CAGGCTAAGCTTGATGCTTTGTCAGCTGAGGTTCTCGGACAGTTTGAATAA
Upstream 100 bases:
>100_bases ATTAAGGAACTAAAACTTTTCAAATGCACGTTAATGTGGTAAAATCGGTATAGTTAACATTAATAGGCTTATTACTAGCT GACACAGGAGGTTAATATAA
Downstream 100 bases:
>100_bases AGACTATGATGAAAATATACATTTGCCCGGATTGTGGCTGGATACGGATGGTTTCAAGAAGGAAAGAGGTTGAATGCTTC AAGTGTGGCAGGCCGCAGAT
Product: putative phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MDFRAEYEKWCTDPYFDEATKAELKAIAGDDKEIEDRFYRTLEFGTAGLRGVIGAGTNRMNIYTVRQATQGLANYILSQG EDAVKRGVAIAHDSRNMHDEFTDATALCLAANGIKTYVFPQLAPVPELSYAVRTLGTIAGVVITASHNPREYNGYKVYWE DGAQVTPPHDTSIMAEVAKVTSFDQVKTMDKAAAIEAGLYNVISDEVEEGYFGELRKLSIHPEIIKAMAKDIKIVYTPLH GTGLRPVQRVLKDMGFENVYIEPSQAVPDGNFPTCPYPNPENPDAWKLALELAKEKDADIVLATDPDADRLGVYCKDTKT GEYVTFTGNMSAMLIGEYILSQKSANGTLPENPAFVESIVSTDMGKAIAAAYGVKHIEVLTGFKYIGEQMLKFEKTGCNN YVFGMEESYGCLPGTYARDKDAPAAVCMLCEVAAFYKSQGKTLWDGMIDMYEKYGYYREGISTMTLKGIDGAAQINEIMT KARAAEPKKFGDYQVIAIRDYKNDTRKDMTTGKVEPTGLPSSNVLYYELNDNAWCCVRPSGTEPKIKFYFGVKGVSLEDS QAKLDALSAEVLGQFE
Sequences:
>Translated_576_residues MDFRAEYEKWCTDPYFDEATKAELKAIAGDDKEIEDRFYRTLEFGTAGLRGVIGAGTNRMNIYTVRQATQGLANYILSQG EDAVKRGVAIAHDSRNMHDEFTDATALCLAANGIKTYVFPQLAPVPELSYAVRTLGTIAGVVITASHNPREYNGYKVYWE DGAQVTPPHDTSIMAEVAKVTSFDQVKTMDKAAAIEAGLYNVISDEVEEGYFGELRKLSIHPEIIKAMAKDIKIVYTPLH GTGLRPVQRVLKDMGFENVYIEPSQAVPDGNFPTCPYPNPENPDAWKLALELAKEKDADIVLATDPDADRLGVYCKDTKT GEYVTFTGNMSAMLIGEYILSQKSANGTLPENPAFVESIVSTDMGKAIAAAYGVKHIEVLTGFKYIGEQMLKFEKTGCNN YVFGMEESYGCLPGTYARDKDAPAAVCMLCEVAAFYKSQGKTLWDGMIDMYEKYGYYREGISTMTLKGIDGAAQINEIMT KARAAEPKKFGDYQVIAIRDYKNDTRKDMTTGKVEPTGLPSSNVLYYELNDNAWCCVRPSGTEPKIKFYFGVKGVSLEDS QAKLDALSAEVLGQFE >Mature_576_residues MDFRAEYEKWCTDPYFDEATKAELKAIAGDDKEIEDRFYRTLEFGTAGLRGVIGAGTNRMNIYTVRQATQGLANYILSQG EDAVKRGVAIAHDSRNMHDEFTDATALCLAANGIKTYVFPQLAPVPELSYAVRTLGTIAGVVITASHNPREYNGYKVYWE DGAQVTPPHDTSIMAEVAKVTSFDQVKTMDKAAAIEAGLYNVISDEVEEGYFGELRKLSIHPEIIKAMAKDIKIVYTPLH GTGLRPVQRVLKDMGFENVYIEPSQAVPDGNFPTCPYPNPENPDAWKLALELAKEKDADIVLATDPDADRLGVYCKDTKT GEYVTFTGNMSAMLIGEYILSQKSANGTLPENPAFVESIVSTDMGKAIAAAYGVKHIEVLTGFKYIGEQMLKFEKTGCNN YVFGMEESYGCLPGTYARDKDAPAAVCMLCEVAAFYKSQGKTLWDGMIDMYEKYGYYREGISTMTLKGIDGAAQINEIMT KARAAEPKKFGDYQVIAIRDYKNDTRKDMTTGKVEPTGLPSSNVLYYELNDNAWCCVRPSGTEPKIKFYFGVKGVSLEDS QAKLDALSAEVLGQFE
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI31377548, Length=560, Percent_Identity=32.8571428571429, Blast_Score=269, Evalue=6e-72, Organism=Homo sapiens, GI63055049, Length=562, Percent_Identity=31.8505338078292, Blast_Score=265, Evalue=7e-71, Organism=Caenorhabditis elegans, GI71993870, Length=557, Percent_Identity=33.0341113105925, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI71993878, Length=282, Percent_Identity=36.1702127659575, Blast_Score=163, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323934, Length=582, Percent_Identity=33.1615120274914, Blast_Score=239, Evalue=1e-63, Organism=Drosophila melanogaster, GI20129809, Length=553, Percent_Identity=31.1030741410488, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24651977, Length=509, Percent_Identity=30.8447937131631, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24653722, Length=585, Percent_Identity=27.3504273504274, Blast_Score=202, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 63628; Mature: 63628
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFRAEYEKWCTDPYFDEATKAELKAIAGDDKEIEDRFYRTLEFGTAGLRGVIGAGTNRM CCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCE NIYTVRQATQGLANYILSQGEDAVKRGVAIAHDSRNMHDEFTDATALCLAANGIKTYVFP EEEEHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECC QLAPVPELSYAVRTLGTIAGVVITASHNPREYNGYKVYWEDGAQVTPPHDTSIMAEVAKV CCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHH TSFDQVKTMDKAAAIEAGLYNVISDEVEEGYFGELRKLSIHPEIIKAMAKDIKIVYTPLH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCC GTGLRPVQRVLKDMGFENVYIEPSQAVPDGNFPTCPYPNPENPDAWKLALELAKEKDADI CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VLATDPDADRLGVYCKDTKTGEYVTFTGNMSAMLIGEYILSQKSANGTLPENPAFVESIV EEEECCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH STDMGKAIAAAYGVKHIEVLTGFKYIGEQMLKFEKTGCNNYVFGMEESYGCLPGTYARDK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC DAPAAVCMLCEVAAFYKSQGKTLWDGMIDMYEKYGYYREGISTMTLKGIDGAAQINEIMT CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCEEEEECCCCHHHHHHHHH KARAAEPKKFGDYQVIAIRDYKNDTRKDMTTGKVEPTGLPSSNVLYYELNDNAWCCVRPS HHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCC GTEPKIKFYFGVKGVSLEDSQAKLDALSAEVLGQFE CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDFRAEYEKWCTDPYFDEATKAELKAIAGDDKEIEDRFYRTLEFGTAGLRGVIGAGTNRM CCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCE NIYTVRQATQGLANYILSQGEDAVKRGVAIAHDSRNMHDEFTDATALCLAANGIKTYVFP EEEEHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECC QLAPVPELSYAVRTLGTIAGVVITASHNPREYNGYKVYWEDGAQVTPPHDTSIMAEVAKV CCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHH TSFDQVKTMDKAAAIEAGLYNVISDEVEEGYFGELRKLSIHPEIIKAMAKDIKIVYTPLH CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCC GTGLRPVQRVLKDMGFENVYIEPSQAVPDGNFPTCPYPNPENPDAWKLALELAKEKDADI CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VLATDPDADRLGVYCKDTKTGEYVTFTGNMSAMLIGEYILSQKSANGTLPENPAFVESIV EEEECCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH STDMGKAIAAAYGVKHIEVLTGFKYIGEQMLKFEKTGCNNYVFGMEESYGCLPGTYARDK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC DAPAAVCMLCEVAAFYKSQGKTLWDGMIDMYEKYGYYREGISTMTLKGIDGAAQINEIMT CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCEEEEECCCCHHHHHHHHH KARAAEPKKFGDYQVIAIRDYKNDTRKDMTTGKVEPTGLPSSNVLYYELNDNAWCCVRPS HHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCC GTEPKIKFYFGVKGVSLEDSQAKLDALSAEVLGQFE CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]