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The map label for this gene is ylxY [H]

Identifier: 238924949

GI number: 238924949

Start: 2475884

End: 2476735

Strand: Reverse

Name: ylxY [H]

Synonym: EUBREC_2600

Alternate gene names: 238924949

Gene position: 2476735-2475884 (Counterclockwise)

Preceding gene: 238924950

Following gene: 238924948

Centisome position: 71.8

GC content: 44.72

Gene sequence:

>852_bases
ATGAGTGAATACAGAGCATACATGCAAAATACAAAACTACATAATGGGACAAAACGAAAGAAACGCCGACACAGATTCCT
TTTTGGAGTGCTGCTGTCGGCGCTTCTTATTACAGGCGCTTTATATGGCAGAGAGTATGACATATCGCAGCTGAAAAATA
TAGAGGTGATGGAGACACTTAGCAGTGCTGTGAGTCAGTTCGGAGACAGAAAGCTGCCTGTATATTCGGTTCAGACAACG
GAAAAAAAGATAGCCCTTTCATTTGACTGTGCCTGGGGAGCAGAGGATTTTGACAGTATGATGGAGACACTTGACAAGCA
CAACGTAAAGGCTACATTTTTTATGACAGGAGGGTTTGTGAGTGATAATCCTGAATGTGTAAAGACGCTGGTTGAAAAAG
GGCATGAGCCCGGAAATCACAGTGAGCACCACTATGATATGGCAACAATCACGGCAGGCGAGATGAAGACGGAGATAATG
GATGTGCACAAAAAGGTCAAGGAGCTGACCGGAAAGGATATGAAGGTATTCAGACCGCCATACGGCTCGTACAACAATGA
ACTGATTGACACAGTTTATGGCTGTGACTATTATCCAATCCAGTGGGATGTGGATTCGCTCGACTGGAAAAACTATGGTG
TGCAAAACATCATAGATACAGTGTGCAATCACAAAAGCCTGGATTGTGGCTCGATAATACTCTGCCATCTAGGCGCCAAA
TACACCTCGCAGGCACTCGATGAAATGCTCACGAAGCTGCAGGACATGGGCTATGAGATAGTTCCGGTATCAAAGCTGAT
CATGAATGAAGGCTATCATATGGATGCAAACGGTATGCAGATCAAGGACTGA

Upstream 100 bases:

>100_bases
GTCGATTGAGGTAGTGCTTGAGTTTATCGGAAGGGCAGAAGAACTGAAATAGAGTTATTTCATTATTCATAATTTGTGAT
AATAAAGAATAGTATATAGC

Downstream 100 bases:

>100_bases
TCAATTTCATAAATCAATATTTTAGTCAATATTTTAGCCCCTTACGATATTGTTATTTACAGACAAGTGTGTTAAACTAA
AACTATATTTTAAAGAAGCT

Product: chitooligosaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSEYRAYMQNTKLHNGTKRKKRRHRFLFGVLLSALLITGALYGREYDISQLKNIEVMETLSSAVSQFGDRKLPVYSVQTT
EKKIALSFDCAWGAEDFDSMMETLDKHNVKATFFMTGGFVSDNPECVKTLVEKGHEPGNHSEHHYDMATITAGEMKTEIM
DVHKKVKELTGKDMKVFRPPYGSYNNELIDTVYGCDYYPIQWDVDSLDWKNYGVQNIIDTVCNHKSLDCGSIILCHLGAK
YTSQALDEMLTKLQDMGYEIVPVSKLIMNEGYHMDANGMQIKD

Sequences:

>Translated_283_residues
MSEYRAYMQNTKLHNGTKRKKRRHRFLFGVLLSALLITGALYGREYDISQLKNIEVMETLSSAVSQFGDRKLPVYSVQTT
EKKIALSFDCAWGAEDFDSMMETLDKHNVKATFFMTGGFVSDNPECVKTLVEKGHEPGNHSEHHYDMATITAGEMKTEIM
DVHKKVKELTGKDMKVFRPPYGSYNNELIDTVYGCDYYPIQWDVDSLDWKNYGVQNIIDTVCNHKSLDCGSIILCHLGAK
YTSQALDEMLTKLQDMGYEIVPVSKLIMNEGYHMDANGMQIKD
>Mature_282_residues
SEYRAYMQNTKLHNGTKRKKRRHRFLFGVLLSALLITGALYGREYDISQLKNIEVMETLSSAVSQFGDRKLPVYSVQTTE
KKIALSFDCAWGAEDFDSMMETLDKHNVKATFFMTGGFVSDNPECVKTLVEKGHEPGNHSEHHYDMATITAGEMKTEIMD
VHKKVKELTGKDMKVFRPPYGSYNNELIDTVYGCDYYPIQWDVDSLDWKNYGVQNIIDTVCNHKSLDCGSIILCHLGAKY
TSQALDEMLTKLQDMGYEIVPVSKLIMNEGYHMDANGMQIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 32277; Mature: 32146

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYRAYMQNTKLHNGTKRKKRRHRFLFGVLLSALLITGALYGREYDISQLKNIEVMETL
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
SSAVSQFGDRKLPVYSVQTTEKKIALSFDCAWGAEDFDSMMETLDKHNVKATFFMTGGFV
HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCC
SDNPECVKTLVEKGHEPGNHSEHHYDMATITAGEMKTEIMDVHKKVKELTGKDMKVFRPP
CCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCC
YGSYNNELIDTVYGCDYYPIQWDVDSLDWKNYGVQNIIDTVCNHKSLDCGSIILCHLGAK
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHEECCCCH
YTSQALDEMLTKLQDMGYEIVPVSKLIMNEGYHMDANGMQIKD
HHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCEECCCCCEECC
>Mature Secondary Structure 
SEYRAYMQNTKLHNGTKRKKRRHRFLFGVLLSALLITGALYGREYDISQLKNIEVMETL
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
SSAVSQFGDRKLPVYSVQTTEKKIALSFDCAWGAEDFDSMMETLDKHNVKATFFMTGGFV
HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCC
SDNPECVKTLVEKGHEPGNHSEHHYDMATITAGEMKTEIMDVHKKVKELTGKDMKVFRPP
CCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCC
YGSYNNELIDTVYGCDYYPIQWDVDSLDWKNYGVQNIIDTVCNHKSLDCGSIILCHLGAK
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHEECCCCH
YTSQALDEMLTKLQDMGYEIVPVSKLIMNEGYHMDANGMQIKD
HHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]