| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924939
Identifier: 238924939
GI number: 238924939
Start: 2462975
End: 2464315
Strand: Reverse
Name: 238924939
Synonym: EUBREC_2590
Alternate gene names: NA
Gene position: 2464315-2462975 (Counterclockwise)
Preceding gene: 238924940
Following gene: 238924938
Centisome position: 71.44
GC content: 41.54
Gene sequence:
>1341_bases ATGACAAAATTTCAGGTGGCATATGTGCCGGTCGGGGTTCCGACATTTCATTTGGAGAGCGCACAGAAGGAATTTGAAAA ATCAATAGACTTATTAAATACAATAACGGATGCTGCAATTGTACCGGATAAAATGCTTTTATCAATTCAGGATTTAACTA ATTTTCTTGATACAATAGAGCCATCCCTGATAATTTTACAGAATATAACCTTTGCAAATGCAGCTTATGCGAGTGAGGTT CTTAAAAGATTTTCGTGTCCGGTATTGCTTTGGACACTTCGTGAGCCGGTTATAGATGGAGGCCGGTTGAGATTAAATTC ATTGACGGGAGCATATTCGGCAGGAAATGCACTGGCTGCGTTTAGGGATGGTAACTTTGAATATATCTTTGGAGCTCCAC AGGAGGAGAGGACAAAGAAAACAATTAGTGCCTGTATTCGTGCAGCATGGCTTAAAAATGAGCTTAAAAATCTAAGGATT GCCTCAGTCGGACATACACCTCAGGGATTTGGATTTGGACGTGCAATGGATGCTGACATGCAAAAGGTATTCGGAGCAAC ACTTGAGTCAATTGAGGTGAGAGAGCTTATTGATATGGCAAAGGGATATACTGATGATGAGTGCAGTGAATATCTCGATA AAATGACTAAGTGTACTGTTGGTCTTGACAAGACTCCTGACAATAATCGAAAGGATTTTGCGAGACTGTGCAAGGCCTAT AAGGAGTATGTAGATGAAAATAATATTGGAGCACTTTCTTCAAGATGTTGGCCTGATTTCTTTACCGCGTTTGGAACACC TGTTTGTGGCGTGCTTGCTATGCTAAATGATATGGGGGTTGCTGCAAGCTGCGAGGCTGATACATATGGAGCACTCTCTA TGTATATGGGAATGAAATTATCTGAGCAGGCTGTATTTTTCGGAGATCCGGTGTCTCTTGATGAGAGTGAAAATACAATT ACATTCTGGCATTGCGGAACAGCTGCATGCTCTATCGCAAGAGAGGACACAGGTGCAACAATCGGAGTGCATCCGAACAG AAAGATTGGCCCTGTAATGGACTTTGGCTGTAAGGCGGCTGACAAAGTCACAGTGTTCAGAGTAGGACAAAAAGCAGATG GAAGCTTTAGATTTTTTGTCACAACAGGAAGTGCTCTCGACAAGCCTAAGCAGTTTTGCGGAACATCAATTGTAGTCAGG ACAGACAAAAATAGCTATGATATTGTAAATCAAAGTGTAAAGGATGGTTGGGAGCCTCATTTTGTGGTGATTTACGGAGA TTGTTCAGATGAGTTAAAGGTTTTAGGACATATGCTTGAAATCGAAGTCTGTGAGTACTGA
Upstream 100 bases:
>100_bases CCAGGAAATATTTATGAAGCTCACCTACATATTACTTTTTATATCAGGAATACTGCTTATGGTTAAGTAGTTTTTGAAAA TTTTATTGGAGGTAAAATAT
Downstream 100 bases:
>100_bases TTTTATGGAAATAGCTTAAATATCATGCTATAATAATAGTAGTATTTAGGTACCGAATAATTGGTTGGAGGATTTTTACA TGGCAAAGTATATTATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: L-Fucose Isomerase Related Protein; L-Fucose Isomerase; L-Fucose Isomerase-Like; L-Fucose Isomerase C-Terminal; L-Fucose Isomerase _2 Domain Protein; L-Fucose Isomerase And Related Proteins-Like Protein; L-Fucose Isomerase Domain-Containing Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTKFQVAYVPVGVPTFHLESAQKEFEKSIDLLNTITDAAIVPDKMLLSIQDLTNFLDTIEPSLIILQNITFANAAYASEV LKRFSCPVLLWTLREPVIDGGRLRLNSLTGAYSAGNALAAFRDGNFEYIFGAPQEERTKKTISACIRAAWLKNELKNLRI ASVGHTPQGFGFGRAMDADMQKVFGATLESIEVRELIDMAKGYTDDECSEYLDKMTKCTVGLDKTPDNNRKDFARLCKAY KEYVDENNIGALSSRCWPDFFTAFGTPVCGVLAMLNDMGVAASCEADTYGALSMYMGMKLSEQAVFFGDPVSLDESENTI TFWHCGTAACSIAREDTGATIGVHPNRKIGPVMDFGCKAADKVTVFRVGQKADGSFRFFVTTGSALDKPKQFCGTSIVVR TDKNSYDIVNQSVKDGWEPHFVVIYGDCSDELKVLGHMLEIEVCEY
Sequences:
>Translated_446_residues MTKFQVAYVPVGVPTFHLESAQKEFEKSIDLLNTITDAAIVPDKMLLSIQDLTNFLDTIEPSLIILQNITFANAAYASEV LKRFSCPVLLWTLREPVIDGGRLRLNSLTGAYSAGNALAAFRDGNFEYIFGAPQEERTKKTISACIRAAWLKNELKNLRI ASVGHTPQGFGFGRAMDADMQKVFGATLESIEVRELIDMAKGYTDDECSEYLDKMTKCTVGLDKTPDNNRKDFARLCKAY KEYVDENNIGALSSRCWPDFFTAFGTPVCGVLAMLNDMGVAASCEADTYGALSMYMGMKLSEQAVFFGDPVSLDESENTI TFWHCGTAACSIAREDTGATIGVHPNRKIGPVMDFGCKAADKVTVFRVGQKADGSFRFFVTTGSALDKPKQFCGTSIVVR TDKNSYDIVNQSVKDGWEPHFVVIYGDCSDELKVLGHMLEIEVCEY >Mature_445_residues TKFQVAYVPVGVPTFHLESAQKEFEKSIDLLNTITDAAIVPDKMLLSIQDLTNFLDTIEPSLIILQNITFANAAYASEVL KRFSCPVLLWTLREPVIDGGRLRLNSLTGAYSAGNALAAFRDGNFEYIFGAPQEERTKKTISACIRAAWLKNELKNLRIA SVGHTPQGFGFGRAMDADMQKVFGATLESIEVRELIDMAKGYTDDECSEYLDKMTKCTVGLDKTPDNNRKDFARLCKAYK EYVDENNIGALSSRCWPDFFTAFGTPVCGVLAMLNDMGVAASCEADTYGALSMYMGMKLSEQAVFFGDPVSLDESENTIT FWHCGTAACSIAREDTGATIGVHPNRKIGPVMDFGCKAADKVTVFRVGQKADGSFRFFVTTGSALDKPKQFCGTSIVVRT DKNSYDIVNQSVKDGWEPHFVVIYGDCSDELKVLGHMLEIEVCEY
Specific function: Unknown
COG id: COG2407
COG function: function code G; L-fucose isomerase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49200; Mature: 49068
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFQVAYVPVGVPTFHLESAQKEFEKSIDLLNTITDAAIVPDKMLLSIQDLTNFLDTIE CCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PSLIILQNITFANAAYASEVLKRFSCPVLLWTLREPVIDGGRLRLNSLTGAYSAGNALAA CCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCEEEEECCCCCCCCCCEEEE FRDGNFEYIFGAPQEERTKKTISACIRAAWLKNELKNLRIASVGHTPQGFGFGRAMDADM EECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHH QKVFGATLESIEVRELIDMAKGYTDDECSEYLDKMTKCTVGLDKTPDNNRKDFARLCKAY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH KEYVDENNIGALSSRCWPDFFTAFGTPVCGVLAMLNDMGVAASCEADTYGALSMYMGMKL HHHHCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCC SEQAVFFGDPVSLDESENTITFWHCGTAACSIAREDTGATIGVHPNRKIGPVMDFGCKAA CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCEEECCCCCCCCCHHHCCCCCC DKVTVFRVGQKADGSFRFFVTTGSALDKPKQFCGTSIVVRTDKNSYDIVNQSVKDGWEPH CCEEEEEECCCCCCCEEEEEEECCHHCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCCCE FVVIYGDCSDELKVLGHMLEIEVCEY EEEEECCCCHHHHHHHHHHEEEEECC >Mature Secondary Structure TKFQVAYVPVGVPTFHLESAQKEFEKSIDLLNTITDAAIVPDKMLLSIQDLTNFLDTIE CCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PSLIILQNITFANAAYASEVLKRFSCPVLLWTLREPVIDGGRLRLNSLTGAYSAGNALAA CCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCEEEEECCCCCCCCCCEEEE FRDGNFEYIFGAPQEERTKKTISACIRAAWLKNELKNLRIASVGHTPQGFGFGRAMDADM EECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHH QKVFGATLESIEVRELIDMAKGYTDDECSEYLDKMTKCTVGLDKTPDNNRKDFARLCKAY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH KEYVDENNIGALSSRCWPDFFTAFGTPVCGVLAMLNDMGVAASCEADTYGALSMYMGMKL HHHHCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCC SEQAVFFGDPVSLDESENTITFWHCGTAACSIAREDTGATIGVHPNRKIGPVMDFGCKAA CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCEEECCCCCCCCCHHHCCCCCC DKVTVFRVGQKADGSFRFFVTTGSALDKPKQFCGTSIVVRTDKNSYDIVNQSVKDGWEPH CCEEEEEECCCCCCCEEEEEEECCHHCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCCCE FVVIYGDCSDELKVLGHMLEIEVCEY EEEEECCCCHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA