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The map label for this gene is ywaC [H]

Identifier: 238924912

GI number: 238924912

Start: 2438742

End: 2439404

Strand: Reverse

Name: ywaC [H]

Synonym: EUBREC_2563

Alternate gene names: 238924912

Gene position: 2439404-2438742 (Counterclockwise)

Preceding gene: 238924913

Following gene: 238924911

Centisome position: 70.71

GC content: 43.44

Gene sequence:

>663_bases
ATGGATGATACACAAATAGAGATGCTGCCGATGTTGGGCGAATTTAGTTCAATTGCCTCGCAGTATGAACACATCATGTT
CTACTACGAATCGGGTATACAGCAGATAGTCGCAAAGCTGCAGATATTAAATAATGAATTTAAAAACAATCATGAAAGAA
ATCCAATTGAGAATATAAAGAGCCGTGTAAAGTCGCTTGACAGCATAATAGACAAAATGAAGCGAAAGGGCATTCCGCTC
ACCACCAACGCCATGAAGCGTGAGATTAAGGATATAGCCGGCGTCAGGGTCATTTGTCCATTCATATCCGATGTATATCA
GGTGGCCAATATGCTTGTGAATCAGGCGGATGTCGAGATTGTCACAATAAAGGACTACATAAAAAAACCGAAGGAGAATG
GCTACAGGAGTCTTCATATGATAGTGCTGGTTGATGTGTATTTTTCGGATCACAAGGACAAGGTGCCGATAGAGATACAG
TTTCGTACCATTGCCATGAATTTCTGGGCCAGCACAGAGCATCAGCTCCGCTACAAGAAGAGCCGTATATTCACGGAGGA
GATGCAGCAGGAGCTCAAGAAATGCGCAGATATCATGGCAGACGCTGATGACAAGATGCAGAATCTGGCAAATGTTTCGG
GGATTGTGCAGCCGATTGAGTAA

Upstream 100 bases:

>100_bases
AAGGCAGTTAAAAAAGGAAAATCGAATACAGAAGCATAATATGTATAAACAGTATAAGGTATACAATTAGTAAGAAAACC
TAAAACCAAGGAGTATAAAC

Downstream 100 bases:

>100_bases
AAGAGAGTGATGTAAATCACTCTTTTTTGCTTGTAAATCAAAAGTTTATATTTATTTAATAAAAATTGTTAGCACTCTCA
CTTGACGAGTGCTAATCTGC

Product: GTP pyrophosphokinase (putative)

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDDTQIEMLPMLGEFSSIASQYEHIMFYYESGIQQIVAKLQILNNEFKNNHERNPIENIKSRVKSLDSIIDKMKRKGIPL
TTNAMKREIKDIAGVRVICPFISDVYQVANMLVNQADVEIVTIKDYIKKPKENGYRSLHMIVLVDVYFSDHKDKVPIEIQ
FRTIAMNFWASTEHQLRYKKSRIFTEEMQQELKKCADIMADADDKMQNLANVSGIVQPIE

Sequences:

>Translated_220_residues
MDDTQIEMLPMLGEFSSIASQYEHIMFYYESGIQQIVAKLQILNNEFKNNHERNPIENIKSRVKSLDSIIDKMKRKGIPL
TTNAMKREIKDIAGVRVICPFISDVYQVANMLVNQADVEIVTIKDYIKKPKENGYRSLHMIVLVDVYFSDHKDKVPIEIQ
FRTIAMNFWASTEHQLRYKKSRIFTEEMQQELKKCADIMADADDKMQNLANVSGIVQPIE
>Mature_220_residues
MDDTQIEMLPMLGEFSSIASQYEHIMFYYESGIQQIVAKLQILNNEFKNNHERNPIENIKSRVKSLDSIIDKMKRKGIPL
TTNAMKREIKDIAGVRVICPFISDVYQVANMLVNQADVEIVTIKDYIKKPKENGYRSLHMIVLVDVYFSDHKDKVPIEIQ
FRTIAMNFWASTEHQLRYKKSRIFTEEMQQELKKCADIMADADDKMQNLANVSGIVQPIE

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 25566; Mature: 25566

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTQIEMLPMLGEFSSIASQYEHIMFYYESGIQQIVAKLQILNNEFKNNHERNPIENIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SRVKSLDSIIDKMKRKGIPLTTNAMKREIKDIAGVRVICPFISDVYQVANMLVNQADVEI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEE
VTIKDYIKKPKENGYRSLHMIVLVDVYFSDHKDKVPIEIQFRTIAMNFWASTEHQLRYKK
EEHHHHHCCCCCCCHHHEEHHHEEEEHHCCCCCCCCEEEEEEEEEEEHHCCCHHHHHHHH
SRIFTEEMQQELKKCADIMADADDKMQNLANVSGIVQPIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDDTQIEMLPMLGEFSSIASQYEHIMFYYESGIQQIVAKLQILNNEFKNNHERNPIENIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SRVKSLDSIIDKMKRKGIPLTTNAMKREIKDIAGVRVICPFISDVYQVANMLVNQADVEI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEE
VTIKDYIKKPKENGYRSLHMIVLVDVYFSDHKDKVPIEIQFRTIAMNFWASTEHQLRYKK
EEHHHHHCCCCCCCHHHEEHHHEEEEHHCCCCCCCCEEEEEEEEEEEHHCCCHHHHHHHH
SRIFTEEMQQELKKCADIMADADDKMQNLANVSGIVQPIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]