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The map label for this gene is gcdC [H]

Identifier: 238923990

GI number: 238923990

Start: 1518571

End: 1518933

Strand: Direct

Name: gcdC [H]

Synonym: EUBREC_1628

Alternate gene names: 238923990

Gene position: 1518571-1518933 (Clockwise)

Preceding gene: 238923989

Following gene: 238923991

Centisome position: 44.02

GC content: 47.38

Gene sequence:

>363_bases
ATGAAAAACTATACAATTACCGTTAACGGAAATGTTTACGATGTTACAGTAGAAGAGACAGGAAGCACACCTAGCACAGC
CAGCGCACCTAGAAGAGCTGCAGCACCTGCTGCCGCTGCACCAAAGGCTGCTGCACCTGCAGGAGCAGGAAGCATCAAGG
TTGAGGCCGGAGCTGCCGGAAAGGTATTTAAGCTCGAGGCTAAGGTTGGCGATGCAGTAAAGAAGGGTGATACACTTCTT
ATTCTTGAGATCATGAAGATGGAGACACCTGTTGTTGCACCACAGGATGGAACAGTAGCAAGCATTGATGTTGCTGTTGG
TGATTCAGTAGAGTCAGGTGCATTACTTGCAACATTAAACTAA

Upstream 100 bases:

>100_bases
AGCTGTTATCTCAGCAGCTATAGCAGCAAGCGAGGGTACTACAACAGAGGGCTTTGTAGTCCGTTCAATCAATAGAAGAT
AATTTAGGAGGACATTTGAG

Downstream 100 bases:

>100_bases
TTCCAGGAGGTAAACTAATTTGAGTTACGTAGGTGAAACACTTTCAAACCTCCTACATCAGACTGCCTTTTTTAATCTGT
CAGTCGGAAACTATGTTATG

Product: pyruvate carboxylase subunit B

Products: NA

Alternate protein names: Biotin carrier [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKNYTITVNGNVYDVTVEETGSTPSTASAPRRAAAPAAAAPKAAAPAGAGSIKVEAGAAGKVFKLEAKVGDAVKKGDTLL
ILEIMKMETPVVAPQDGTVASIDVAVGDSVESGALLATLN

Sequences:

>Translated_120_residues
MKNYTITVNGNVYDVTVEETGSTPSTASAPRRAAAPAAAAPKAAAPAGAGSIKVEAGAAGKVFKLEAKVGDAVKKGDTLL
ILEIMKMETPVVAPQDGTVASIDVAVGDSVESGALLATLN
>Mature_120_residues
MKNYTITVNGNVYDVTVEETGSTPSTASAPRRAAAPAAAAPKAAAPAGAGSIKVEAGAAGKVFKLEAKVGDAVKKGDTLL
ILEIMKMETPVVAPQDGTVASIDVAVGDSVESGALLATLN

Specific function: Biotin carrier subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 11910; Mature: 11910

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYTITVNGNVYDVTVEETGSTPSTASAPRRAAAPAAAAPKAAAPAGAGSIKVEAGAAG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
KVFKLEAKVGDAVKKGDTLLILEIMKMETPVVAPQDGTVASIDVAVGDSVESGALLATLN
CEEEEECCCCCHHHCCCEEEEEEEECCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEEC
>Mature Secondary Structure
MKNYTITVNGNVYDVTVEETGSTPSTASAPRRAAAPAAAAPKAAAPAGAGSIKVEAGAAG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
KVFKLEAKVGDAVKKGDTLLILEIMKMETPVVAPQDGTVASIDVAVGDSVESGALLATLN
CEEEEECCCCCHHHCCCEEEEEEEECCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]