| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yycG [H]
Identifier: 238923976
GI number: 238923976
Start: 1502120
End: 1503571
Strand: Direct
Name: yycG [H]
Synonym: EUBREC_1614
Alternate gene names: 238923976
Gene position: 1502120-1503571 (Clockwise)
Preceding gene: 238923975
Following gene: 238923977
Centisome position: 43.54
GC content: 42.91
Gene sequence:
>1452_bases ATGTTTAAGAGTAAAGTACATTTTGCATTTTATAAGAGTCTGAAATCCAGGCTGATTTTCATGATTTTTGTTCTCGTTCT GGTACCGGAGGTGGTGCTGTGCTTCGGCATACTTAACACCTACGAGTCCAGAGCGGTTTCAATCCGCGAAAGTGAAGTGC TTAGTCAGGCAAAGATTCTCGCAAACAAGATATCCACAAGTAAATACTTTGATAAGGATGGCAGTGACTTGAGTAATATT GATGCTCAGATTGACACTCTTACTACTATATATGAGGGCCGTGTGCTCATAGTTGACAAGCATTTTAAGATTATTAAGGA TACGTACAATTTAGATGATGGCAATACTATTGTCTCAGAGGAGGTTATCAAGACCTTCTCTGCTTCAGAGATTACTAACT ATGATTCTAAAAACCACTATATCGAGCTTTCTGTTCCGATAAGCAATCCAAACGACAAGGATTCAAAGATAGAGGGAGCA CTTGTTGTAAGTGTGTCGACGGACAATATATCGCTAAATATGTCGTATCTGACACAGATTGCTGTGACGGTTGCTATTAT CGCAGGTGCGGTGGTGCTCTTTTTTGGTGTGCTTGTGCTTTTGCACCTTTTTGTTCCGATTAAGAAGCTTTCTGACGAGA TATCAGACATTAAGGATGGCTTTGGAAAAGAGCAGCTGGATGTAGATGACTATGCGGAGACTGCTATAATAAGCAGGAAT TTTAATGAGCTGATGAGCGGAATGAAGGTCATGGATGAGTCCAGACAGGAGTTTGTATCGAATGTGTCACATGAGCTCAA GACACCTCTTACTTCCATGAAGGTACTCGCAGATTCCATCAACAGCATGGGTGATGAGGCTCCGATTGAGATGTACAGGG AGTTCATGGGAGATATCACAAGCGAGATAGACAGAGAGACAAAGATAATAAATGACCTGTTATCACTGGTTAAGATGGAT AAGTCGGCTGCCACGCTGAATATCGAGAGTGTTAATATCAATGACCTGCTCGAGCAGATTATGAAGAGACTTCAGCCGAT TGCTGACAAGCAGCAGGTGGAGCTTGTACTCGAGAGCTTCAGACCGGTAACTGCAGAGATAGATGAGGTGAAGCTGACGC TTGCTTTTACAAACCTCATTGAGAATGCAATCAAGTACAATGACAATGAGACCGGTGGCTATGTGCATGTATCCTTAAAT GCGGATCATCAGTATTTCTATCTGAAGGTGGAGGACAACGGTATCGGTATACCGGAGGAGTCCTTAGAGCACATCTATGA GAGATTTTATCGCGTGGACAAGTCGCATTCGAGAGAGATTGGCGGTACAGGTCTGGGACTTGCCATTACAAGAAGCTCTA TTCTTATGCATAGGGGAGCTATAAAGGCTCACAGTGTGATGGGAGAGGGCACTACCTTTGATGTGCGTATACCGCTCAAC TATATTGTATAG
Upstream 100 bases:
>100_bases AAAGATTGAGGCAAATCCAAGCGAGCCGAAGTACGTTCATACCAAGTGGGGTGTGGGATATTACTACAACCAGAAGTAAT ACTTTCAGAAAGGTTCTAAA
Downstream 100 bases:
>100_bases GAGGCTTGACGTGAAAAGAATAATTATATTCGTGCTCACTGCAGTAATTCTGCTCTCCATGGGCGGCTGCACAAAGAAAA AAGCAGATAATACGGTTGAG
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MFKSKVHFAFYKSLKSRLIFMIFVLVLVPEVVLCFGILNTYESRAVSIRESEVLSQAKILANKISTSKYFDKDGSDLSNI DAQIDTLTTIYEGRVLIVDKHFKIIKDTYNLDDGNTIVSEEVIKTFSASEITNYDSKNHYIELSVPISNPNDKDSKIEGA LVVSVSTDNISLNMSYLTQIAVTVAIIAGAVVLFFGVLVLLHLFVPIKKLSDEISDIKDGFGKEQLDVDDYAETAIISRN FNELMSGMKVMDESRQEFVSNVSHELKTPLTSMKVLADSINSMGDEAPIEMYREFMGDITSEIDRETKIINDLLSLVKMD KSAATLNIESVNINDLLEQIMKRLQPIADKQQVELVLESFRPVTAEIDEVKLTLAFTNLIENAIKYNDNETGGYVHVSLN ADHQYFYLKVEDNGIGIPEESLEHIYERFYRVDKSHSREIGGTGLGLAITRSSILMHRGAIKAHSVMGEGTTFDVRIPLN YIV
Sequences:
>Translated_483_residues MFKSKVHFAFYKSLKSRLIFMIFVLVLVPEVVLCFGILNTYESRAVSIRESEVLSQAKILANKISTSKYFDKDGSDLSNI DAQIDTLTTIYEGRVLIVDKHFKIIKDTYNLDDGNTIVSEEVIKTFSASEITNYDSKNHYIELSVPISNPNDKDSKIEGA LVVSVSTDNISLNMSYLTQIAVTVAIIAGAVVLFFGVLVLLHLFVPIKKLSDEISDIKDGFGKEQLDVDDYAETAIISRN FNELMSGMKVMDESRQEFVSNVSHELKTPLTSMKVLADSINSMGDEAPIEMYREFMGDITSEIDRETKIINDLLSLVKMD KSAATLNIESVNINDLLEQIMKRLQPIADKQQVELVLESFRPVTAEIDEVKLTLAFTNLIENAIKYNDNETGGYVHVSLN ADHQYFYLKVEDNGIGIPEESLEHIYERFYRVDKSHSREIGGTGLGLAITRSSILMHRGAIKAHSVMGEGTTFDVRIPLN YIV >Mature_483_residues MFKSKVHFAFYKSLKSRLIFMIFVLVLVPEVVLCFGILNTYESRAVSIRESEVLSQAKILANKISTSKYFDKDGSDLSNI DAQIDTLTTIYEGRVLIVDKHFKIIKDTYNLDDGNTIVSEEVIKTFSASEITNYDSKNHYIELSVPISNPNDKDSKIEGA LVVSVSTDNISLNMSYLTQIAVTVAIIAGAVVLFFGVLVLLHLFVPIKKLSDEISDIKDGFGKEQLDVDDYAETAIISRN FNELMSGMKVMDESRQEFVSNVSHELKTPLTSMKVLADSINSMGDEAPIEMYREFMGDITSEIDRETKIINDLLSLVKMD KSAATLNIESVNINDLLEQIMKRLQPIADKQQVELVLESFRPVTAEIDEVKLTLAFTNLIENAIKYNDNETGGYVHVSLN ADHQYFYLKVEDNGIGIPEESLEHIYERFYRVDKSHSREIGGTGLGLAITRSSILMHRGAIKAHSVMGEGTTFDVRIPLN YIV
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG5002
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=31.9502074688797, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=28.0575539568345, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1790346, Length=277, Percent_Identity=27.4368231046931, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=28.1746031746032, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1786783, Length=311, Percent_Identity=25.4019292604502, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1787894, Length=317, Percent_Identity=25.2365930599369, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI48994928, Length=230, Percent_Identity=29.5652173913043, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789808, Length=278, Percent_Identity=24.4604316546763, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=31.3559322033898, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789403, Length=293, Percent_Identity=25.938566552901, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788279, Length=300, Percent_Identity=22, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=26.0683760683761, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=26.431718061674, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1790861, Length=355, Percent_Identity=21.9718309859155, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787374, Length=424, Percent_Identity=22.1698113207547, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=25.1082251082251, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87082128, Length=304, Percent_Identity=25.9868421052632, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790551, Length=292, Percent_Identity=24.6575342465753, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=24.0343347639485, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322044, Length=100, Percent_Identity=36, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54206; Mature: 54206
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSKVHFAFYKSLKSRLIFMIFVLVLVPEVVLCFGILNTYESRAVSIRESEVLSQAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH ANKISTSKYFDKDGSDLSNIDAQIDTLTTIYEGRVLIVDKHFKIIKDTYNLDDGNTIVSE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCCCCCEEHHH EVIKTFSASEITNYDSKNHYIELSVPISNPNDKDSKIEGALVVSVSTDNISLNMSYLTQI HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHH AVTVAIIAGAVVLFFGVLVLLHLFVPIKKLSDEISDIKDGFGKEQLDVDDYAETAIISRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC FNELMSGMKVMDESRQEFVSNVSHELKTPLTSMKVLADSINSMGDEAPIEMYREFMGDIT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SEIDRETKIINDLLSLVKMDKSAATLNIESVNINDLLEQIMKRLQPIADKQQVELVLESF HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHC RPVTAEIDEVKLTLAFTNLIENAIKYNDNETGGYVHVSLNADHQYFYLKVEDNGIGIPEE CCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCHH SLEHIYERFYRVDKSHSREIGGTGLGLAITRSSILMHRGAIKAHSVMGEGTTFDVRIPLN HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECHH YIV CCC >Mature Secondary Structure MFKSKVHFAFYKSLKSRLIFMIFVLVLVPEVVLCFGILNTYESRAVSIRESEVLSQAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH ANKISTSKYFDKDGSDLSNIDAQIDTLTTIYEGRVLIVDKHFKIIKDTYNLDDGNTIVSE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCCCCCEEHHH EVIKTFSASEITNYDSKNHYIELSVPISNPNDKDSKIEGALVVSVSTDNISLNMSYLTQI HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHH AVTVAIIAGAVVLFFGVLVLLHLFVPIKKLSDEISDIKDGFGKEQLDVDDYAETAIISRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC FNELMSGMKVMDESRQEFVSNVSHELKTPLTSMKVLADSINSMGDEAPIEMYREFMGDIT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SEIDRETKIINDLLSLVKMDKSAATLNIESVNINDLLEQIMKRLQPIADKQQVELVLESF HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHC RPVTAEIDEVKLTLAFTNLIENAIKYNDNETGGYVHVSLNADHQYFYLKVEDNGIGIPEE CCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCHH SLEHIYERFYRVDKSHSREIGGTGLGLAITRSSILMHRGAIKAHSVMGEGTTFDVRIPLN HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECHH YIV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]