Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238923927

Identifier: 238923927

GI number: 238923927

Start: 1450617

End: 1451981

Strand: Direct

Name: 238923927

Synonym: EUBREC_1565

Alternate gene names: NA

Gene position: 1450617-1451981 (Clockwise)

Preceding gene: 238923926

Following gene: 238923928

Centisome position: 42.05

GC content: 46.3

Gene sequence:

>1365_bases
ATGATAAATATTGGTGAAGTAATTGAGACCAATGACATGGTGGAGAAGGAAAATCTTGACGTGCGTACAATCACACTCGG
TATCAGCCTGCTCGACTGTATAGACTCAGACCTTGCAAAGGTAAATGAGAATATCTACAACAAGATTACAACACTTGCAA
AGAATCTTGTATCAACAGGAAAAGAGATAGAGAACAACTACTGTATCCCTATTGTAAACAAACGTATTTCAGTTACACCT
ATCGCCCTTGTCGGCGGTGCGGCCTGCAAGAGCTCAGAGGATTTTGTTACCATAGCAAAGACACTTGACAGAGCTGCCAA
AGAGGTAGGTGTCAACTTCATCGGTGGATACTCAGCACTTGTATCAAAGGGCATGACAAAGGCGGATGAGCTTTTAATCA
AATCCATCCCTCAGGCAATGCTTGAGACAGACCTGGTATGCAGCTCTGTAAATGTTGGCTCTACAAAAACCGGAATCAAC
ATGGATGCAGTAAAGCTGATTGGCGAGATGATAAAGGAGACAGCAGAGGTGACAAAACACCTTCCTGTATCAGGCTGTGC
CAAGTTTGTAGTATTCTGCAACGCTCCTGATGACAATCCGTTTATGGCAGGAGCCTTCCATGGTGTGACAGAGGCTGATG
CCATCATCAATGTAGGTGTCAGCGGACCCGGAGTAGTAAAGACTGCTCTTGAAAAGGTAAGAGGCGAGAACTTTGAGGTG
CTCTGTGAGACAATCAAGAAGACAGCCTTCAAGGTTACACGAGTAGGACAGCTTGTGGCAAAGGAGGCTTCAAAGAAGCT
TGGAGTGCCATTTGGAATCATAGACCTTTCACTTGCACCTACACCGGCTATCGGAGACTCTGTAGCTGATATTCTCTGTG
AGATAGGCTTAGAGAGAGCCGGAGCTCCGGGAACAACAGCAGCACTTGCACTCTTAAACGATCAGGTGAAAAAGGGCGGT
ATCATGGCATCCTCATATGTCGGCGGACTCTCAGGTGCCTTTATTCCGGTATCAGAGGATCAGGGAATGATAGATGCCGT
AAACGATGGTGCACTCACCCTCGAAAAGCTTGAGGCTATGACCTGTGTGTGCTCAGTGGGACTTGACATGATTGCAATCC
CGGGCGATACAAAGGCCACCACAATTTCAGGAATTATTGCAGATGAGATGGCTATCGGTATGATAAACCAGAAGACAACA
GCCTGCAGACTGCTTCCGGCAATCGGAAAGGATGTAGGTGATGTGGTAGAAATCGGAGGACTCCTTGGAAGTGCACCGGT
TATGCCGGTAAACAGATTCTCTTGTGATGCATTTGTAAATCGTGGAGGAAGAATCCCGGCACCTATTCATAGCTTTAAAA
ATTAG

Upstream 100 bases:

>100_bases
GGTGTAACAATAAAGTGTCAGAAGGAAGAAATCTTTGAGATGATGCATCGAATCTAGTTTAGCATAAAAATGTCATACAC
AGTTAAAGGAGAACAGCAAA

Downstream 100 bases:

>100_bases
TAAATAATGGCATTGTTTACAAGCATGTACTTATAAGAATAACTTATAAGTACATGCTTATTTTAAAGTGGTACTTGACA
ATGACAAAAATACATGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP
IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN
MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV
LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG
IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT
ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN

Sequences:

>Translated_454_residues
MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP
IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN
MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV
LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG
IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT
ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN
>Mature_454_residues
MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP
IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN
MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV
LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG
IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT
ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1565_EUBR3 (C4Z987)

Other databases:

- EMBL:   CP001107
- RefSeq:   YP_002937443.1
- ProteinModelPortal:   C4Z987
- GeneID:   7965522
- GenomeReviews:   CP001107_GR
- KEGG:   ere:EUBREC_1565
- ProtClustDB:   PRK05313
- HAMAP:   MF_01221
- InterPro:   IPR007841

Pfam domain/function: PF05167 DUF711

EC number: NA

Molecular weight: Translated: 47420; Mature: 47420

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTG
CCCCCCHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEIENNYCIPIVNKRISVTPIALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSAL
HHHCCCCEEEEECCCEEECEEHEECCHHCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHH
VSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGINMDAVKLIGEMIKETAEVTKH
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV
CCHHCCEEEEEEEECCCCCCEEEEHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHH
LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
GAPGTTAALALLNDQVKKGGIMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAM
CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH
TCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTTACRLLPAIGKDVGDVVEIGG
HHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
LLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN
HHCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTG
CCCCCCHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEIENNYCIPIVNKRISVTPIALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSAL
HHHCCCCEEEEECCCEEECEEHEECCHHCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHH
VSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGINMDAVKLIGEMIKETAEVTKH
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV
CCHHCCEEEEEEEECCCCCCEEEEHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHH
LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
GAPGTTAALALLNDQVKKGGIMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAM
CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH
TCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTTACRLLPAIGKDVGDVVEIGG
HHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
LLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN
HHCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA