| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923838
Identifier: 238923838
GI number: 238923838
Start: 1344277
End: 1345836
Strand: Direct
Name: 238923838
Synonym: EUBREC_1466
Alternate gene names: NA
Gene position: 1344277-1345836 (Clockwise)
Preceding gene: 238923837
Following gene: 238923839
Centisome position: 38.97
GC content: 42.12
Gene sequence:
>1560_bases ATGGATTATAGATGGAGAATACTAATGAGCGATAAATCGACAGAAAACTATCTGGACAATTTGCTGGATTCAATGAATAA GCTGCAGGATACAGATACGAAGATGTCTGGGGCTGATCAGGATGAATTCCTCAAAAAGTTTGAGGACGAGCTTGAAAATG AGACATATGATGAGTATCTGTCGAACTTTGAAAAGGAACTTGAGAGGGAAAATGAGCAGGCCAAGGGTCAGGCTCTTAAT GTACAGACTCCGGCTCCTGATGACAAGGATGCTTCACTTGATGATATGCTCACTGAGTTTGACCGCAGGATGAAGGAACA GGAGACTCAGGGAGATAAACAGGAAAACAAAGCAGACAATAATCTAAGCGATGCGGTATTTAATTTTACACCGGCAGATT CTGGGATAGAGATGATGGATGCAAACATGCCGGAAATGGCTGAGAATCCCAAACAGGAGGAGACTCCGGAGAGTATAATA ACAAATGAACCTCAGATGGTTGAAGAAATAGGAGAGCCGGATTTGGCAGGAAATGCATCAAAGGATATACTTGACATACT GGGTAGTGATGGTCTGGATAATATCGGTGATCTGCTTGAAGGAAAAACCGGTGAGACAGGGGCTGATATAGATGATTATG CAAGCAGCCAGATGAAAGTGCACGAGACGGCTGATGCAGCAGTTGATGCACAAGATACTGAAAAAAAGAGCCTTTTAAAA AGAATAATATCATTTTTTACAAAAGAGCCGCAGTCAGATGATGTCACAGATATACAGAGCACAGCAGAAGGTGCAGAAAC TGACGCAAAGACACTCTCAGATGAGAATAAGCAGATACTTGAAGCGCTGGATGCTGACGGAGAGCTAAACGAAGCCACAG ATAAGCCAAAGAAGGGCAAAAAGCCTAAAAAAGAAAAGAAGCCAAAAAAACCTAAAAAAGAAAAAAAGCCAAAGGCTCCA AAGGAAAAGAAGGAACGCATTGGATGGGAGAAGGGACCTAAGCTTCCTAAGGGACCTGTTATAGTAATCTGGGTATTTGT TATGTCGATAGTTGTGTTTGTTCTCATATGCACCTTTTTGCTCGGAAACAACTCCAAAGTGACTGATGCTCAGAATACGT ACAATCAGGCAATAGCTGATCTGGGACAGAATAAAGCTGATTCAATAGAACTGTATACAAAGGCCTACAGCAGGCTGAGC GGCTTGAAGCTTTCGGGTGACGATAAGCAGTTGTACAATAAGCTGTCGGTGCTTGCATCAGTGTCAGGTAAGTATGATGC CTATAAGAGCTTTAGCGATTCAGGCTATGTAACCATGGCAGCGGATTCCTTAGTATGTGCGGCAGGACGATGTGCTGTAA ATGCAGACAATGCAAAGGAATACGGATGTGAGCTGCAGCTTGAGCAGCTTAAAAACATTATTTCTGATACCCTGAGCAGT CAGTATGGCTTATCATATGATGATGCCATTGCTCTATATAATATAGATGATAGAGATGACTATACACTGGCACTGACACA GAAATTAAATGAATTAGGCATTAAAGAGGAGACAAAATGA
Upstream 100 bases:
>100_bases GCCTGAAATCGGAAAGCTTGTAGAGGCGATTGACAAGCTGATTGATAAAGCATAATATATTTAGATACAAGGGGTGTGGC TTGTTTAGCTGCACCCTTTA
Downstream 100 bases:
>100_bases TATGATTGCAATCATCGATTATGGAGCAGGCAACCTGCGAAGTGTGGAAAAGGCTCTTACAGCTATAGGCGAGGAGAGTA TTGTGACCAGAGACAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MDYRWRILMSDKSTENYLDNLLDSMNKLQDTDTKMSGADQDEFLKKFEDELENETYDEYLSNFEKELERENEQAKGQALN VQTPAPDDKDASLDDMLTEFDRRMKEQETQGDKQENKADNNLSDAVFNFTPADSGIEMMDANMPEMAENPKQEETPESII TNEPQMVEEIGEPDLAGNASKDILDILGSDGLDNIGDLLEGKTGETGADIDDYASSQMKVHETADAAVDAQDTEKKSLLK RIISFFTKEPQSDDVTDIQSTAEGAETDAKTLSDENKQILEALDADGELNEATDKPKKGKKPKKEKKPKKPKKEKKPKAP KEKKERIGWEKGPKLPKGPVIVIWVFVMSIVVFVLICTFLLGNNSKVTDAQNTYNQAIADLGQNKADSIELYTKAYSRLS GLKLSGDDKQLYNKLSVLASVSGKYDAYKSFSDSGYVTMAADSLVCAAGRCAVNADNAKEYGCELQLEQLKNIISDTLSS QYGLSYDDAIALYNIDDRDDYTLALTQKLNELGIKEETK
Sequences:
>Translated_519_residues MDYRWRILMSDKSTENYLDNLLDSMNKLQDTDTKMSGADQDEFLKKFEDELENETYDEYLSNFEKELERENEQAKGQALN VQTPAPDDKDASLDDMLTEFDRRMKEQETQGDKQENKADNNLSDAVFNFTPADSGIEMMDANMPEMAENPKQEETPESII TNEPQMVEEIGEPDLAGNASKDILDILGSDGLDNIGDLLEGKTGETGADIDDYASSQMKVHETADAAVDAQDTEKKSLLK RIISFFTKEPQSDDVTDIQSTAEGAETDAKTLSDENKQILEALDADGELNEATDKPKKGKKPKKEKKPKKPKKEKKPKAP KEKKERIGWEKGPKLPKGPVIVIWVFVMSIVVFVLICTFLLGNNSKVTDAQNTYNQAIADLGQNKADSIELYTKAYSRLS GLKLSGDDKQLYNKLSVLASVSGKYDAYKSFSDSGYVTMAADSLVCAAGRCAVNADNAKEYGCELQLEQLKNIISDTLSS QYGLSYDDAIALYNIDDRDDYTLALTQKLNELGIKEETK >Mature_519_residues MDYRWRILMSDKSTENYLDNLLDSMNKLQDTDTKMSGADQDEFLKKFEDELENETYDEYLSNFEKELERENEQAKGQALN VQTPAPDDKDASLDDMLTEFDRRMKEQETQGDKQENKADNNLSDAVFNFTPADSGIEMMDANMPEMAENPKQEETPESII TNEPQMVEEIGEPDLAGNASKDILDILGSDGLDNIGDLLEGKTGETGADIDDYASSQMKVHETADAAVDAQDTEKKSLLK RIISFFTKEPQSDDVTDIQSTAEGAETDAKTLSDENKQILEALDADGELNEATDKPKKGKKPKKEKKPKKPKKEKKPKAP KEKKERIGWEKGPKLPKGPVIVIWVFVMSIVVFVLICTFLLGNNSKVTDAQNTYNQAIADLGQNKADSIELYTKAYSRLS GLKLSGDDKQLYNKLSVLASVSGKYDAYKSFSDSGYVTMAADSLVCAAGRCAVNADNAKEYGCELQLEQLKNIISDTLSS QYGLSYDDAIALYNIDDRDDYTLALTQKLNELGIKEETK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57841; Mature: 57841
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRWRILMSDKSTENYLDNLLDSMNKLQDTDTKMSGADQDEFLKKFEDELENETYDEYL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH SNFEKELERENEQAKGQALNVQTPAPDDKDASLDDMLTEFDRRMKEQETQGDKQENKADN HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC NLSDAVFNFTPADSGIEMMDANMPEMAENPKQEETPESIITNEPQMVEEIGEPDLAGNAS CHHHHHEECCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCH KDILDILGSDGLDNIGDLLEGKTGETGADIDDYASSQMKVHETADAAVDAQDTEKKSLLK HHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCEEHHHHHHHHCCCCCHHHHHHHH RIISFFTKEPQSDDVTDIQSTAEGAETDAKTLSDENKQILEALDADGELNEATDKPKKGK HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCCCCC KPKKEKKPKKPKKEKKPKAPKEKKERIGWEKGPKLPKGPVIVIWVFVMSIVVFVLICTFL CCCHHCCCCCCCHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGNNSKVTDAQNTYNQAIADLGQNKADSIELYTKAYSRLSGLKLSGDDKQLYNKLSVLAS HCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VSGKYDAYKSFSDSGYVTMAADSLVCAAGRCAVNADNAKEYGCELQLEQLKNIISDTLSS HCCCHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH QYGLSYDDAIALYNIDDRDDYTLALTQKLNELGIKEETK HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDYRWRILMSDKSTENYLDNLLDSMNKLQDTDTKMSGADQDEFLKKFEDELENETYDEYL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH SNFEKELERENEQAKGQALNVQTPAPDDKDASLDDMLTEFDRRMKEQETQGDKQENKADN HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC NLSDAVFNFTPADSGIEMMDANMPEMAENPKQEETPESIITNEPQMVEEIGEPDLAGNAS CHHHHHEECCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCH KDILDILGSDGLDNIGDLLEGKTGETGADIDDYASSQMKVHETADAAVDAQDTEKKSLLK HHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCEEHHHHHHHHCCCCCHHHHHHHH RIISFFTKEPQSDDVTDIQSTAEGAETDAKTLSDENKQILEALDADGELNEATDKPKKGK HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCCCCC KPKKEKKPKKPKKEKKPKAPKEKKERIGWEKGPKLPKGPVIVIWVFVMSIVVFVLICTFL CCCHHCCCCCCCHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGNNSKVTDAQNTYNQAIADLGQNKADSIELYTKAYSRLSGLKLSGDDKQLYNKLSVLAS HCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VSGKYDAYKSFSDSGYVTMAADSLVCAAGRCAVNADNAKEYGCELQLEQLKNIISDTLSS HCCCHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH QYGLSYDDAIALYNIDDRDDYTLALTQKLNELGIKEETK HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA