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The map label for this gene is 238923764

Identifier: 238923764

GI number: 238923764

Start: 1262955

End: 1264064

Strand: Direct

Name: 238923764

Synonym: EUBREC_1386

Alternate gene names: NA

Gene position: 1262955-1264064 (Clockwise)

Preceding gene: 238923763

Following gene: 238923765

Centisome position: 36.61

GC content: 44.05

Gene sequence:

>1110_bases
ATGTCAAAATTTATTAAGGGTATGGATTTATCAACCTTGCTCGAGCTGGAACGCTGCGGAGCAAAATACTACGAGGATGG
AAAGGAGAAGGATATTCTTGACATCATGAAGGAGCATGATGTTGATACAATCCGTCTTCGTCTGTGGAACGACCCAAAAT
CAGAGGAGGGTGAGCCTTACGGTGCGGGTAACAATGACCTGGCTGAGACTATCGCTATCGGAAAAAAGGTTACAGATGCA
GGCTTTGGAGTGCTTTTGAATTTCCACTACAGTGATTTCTGGGCAGACCCGGGAAAGCAGATTAAGCCAAAGGCATGGAA
AGATTTCGGTGTGGACGAGCTGGAGCAGGCTGTATATGATTTTACACTTGAAAATCTGACAAAGATTATTGAGGCAGGTG
TAAATGTCACAATGATTCAGGTAGGTAATGAGCTTTCAAACGGACTTTTGTGGCCTGAGGGAAAGGTACCTGACTACGAT
AATATAGCAAAATTTGTGAATGCCGGAATACGTGCCTGCCGCAAGGTAAATGCTGATATTCCGATTATGATTCACCTTGA
TAATGGTGGAAACAATGAGCTTTATGTCAGATGGTTTACAAACTTCATCGAAAGAGGAGAGGAGTTTGAGTATATCGGAT
TGTCATACTATCCTTTCTGGCACGGCTCGCTCGATCAGCTTGAGTTCAATATGAACGATATTGCAAAGCGTTTCAATAAG
GACCTTATCATCGCTGAGGTATCCATGGGCTTTACAATGGACAGCTACCAGGAGTACGAGAAGCTTGCTGATTCTGAGCG
CAAGGGTTATGCGACAAAACCGGAGCTTGTTGAGAAGATAGATTATCCTATGACTATTGAGGGACAGGCTGACTTTACAA
AGGATTTCTTAAACAGAGTGGCAAATGTTGTGGATGACCACGGAAAAGGATTTTTCTGGTGGGAGCCTGCGTGGATTCCT
GTACCGGGCTCAGGCTGGGCTACACCTGCTTCACTTAAGTACATGAATGATCCGGGACCATGCGGCAATGAGTGGGCAAA
CCAGGCACTCTTTGACTATGATGGAAATGTGCTGCCGGCACTTGATGTTATTAAAAATTTTAAAAAATAA

Upstream 100 bases:

>100_bases
TTATTACGCATTTTGAGAGCAGGGACTATTACTGGGACTGCTCTCATGGTGTAAATAAATGATATAAGGATAAATGATAT
AAGAATTAAGGAGAATTAAA

Downstream 100 bases:

>100_bases
AATAATAACATATGTAATTTTGTTGCATGATTTGATTTGTTATGTTGCATTTTCAGTCGGATGTATTGCAATGTAAAAAT
GTGCAGTTATAATAGAGTTA

Product: glycosyl hydrolase, family 53

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSKFIKGMDLSTLLELERCGAKYYEDGKEKDILDIMKEHDVDTIRLRLWNDPKSEEGEPYGAGNNDLAETIAIGKKVTDA
GFGVLLNFHYSDFWADPGKQIKPKAWKDFGVDELEQAVYDFTLENLTKIIEAGVNVTMIQVGNELSNGLLWPEGKVPDYD
NIAKFVNAGIRACRKVNADIPIMIHLDNGGNNELYVRWFTNFIERGEEFEYIGLSYYPFWHGSLDQLEFNMNDIAKRFNK
DLIIAEVSMGFTMDSYQEYEKLADSERKGYATKPELVEKIDYPMTIEGQADFTKDFLNRVANVVDDHGKGFFWWEPAWIP
VPGSGWATPASLKYMNDPGPCGNEWANQALFDYDGNVLPALDVIKNFKK

Sequences:

>Translated_369_residues
MSKFIKGMDLSTLLELERCGAKYYEDGKEKDILDIMKEHDVDTIRLRLWNDPKSEEGEPYGAGNNDLAETIAIGKKVTDA
GFGVLLNFHYSDFWADPGKQIKPKAWKDFGVDELEQAVYDFTLENLTKIIEAGVNVTMIQVGNELSNGLLWPEGKVPDYD
NIAKFVNAGIRACRKVNADIPIMIHLDNGGNNELYVRWFTNFIERGEEFEYIGLSYYPFWHGSLDQLEFNMNDIAKRFNK
DLIIAEVSMGFTMDSYQEYEKLADSERKGYATKPELVEKIDYPMTIEGQADFTKDFLNRVANVVDDHGKGFFWWEPAWIP
VPGSGWATPASLKYMNDPGPCGNEWANQALFDYDGNVLPALDVIKNFKK
>Mature_368_residues
SKFIKGMDLSTLLELERCGAKYYEDGKEKDILDIMKEHDVDTIRLRLWNDPKSEEGEPYGAGNNDLAETIAIGKKVTDAG
FGVLLNFHYSDFWADPGKQIKPKAWKDFGVDELEQAVYDFTLENLTKIIEAGVNVTMIQVGNELSNGLLWPEGKVPDYDN
IAKFVNAGIRACRKVNADIPIMIHLDNGGNNELYVRWFTNFIERGEEFEYIGLSYYPFWHGSLDQLEFNMNDIAKRFNKD
LIIAEVSMGFTMDSYQEYEKLADSERKGYATKPELVEKIDYPMTIEGQADFTKDFLNRVANVVDDHGKGFFWWEPAWIPV
PGSGWATPASLKYMNDPGPCGNEWANQALFDYDGNVLPALDVIKNFKK

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 42049; Mature: 41918

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFIKGMDLSTLLELERCGAKYYEDGKEKDILDIMKEHDVDTIRLRLWNDPKSEEGEPY
CCCHHCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
GAGNNDLAETIAIGKKVTDAGFGVLLNFHYSDFWADPGKQIKPKAWKDFGVDELEQAVYD
CCCCCHHHHHHHHCCHHCCCCCEEEEEECCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHH
FTLENLTKIIEAGVNVTMIQVGNELSNGLLWPEGKVPDYDNIAKFVNAGIRACRKVNADI
HHHHHHHHHHHCCCCEEEEEECCHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PIMIHLDNGGNNELYVRWFTNFIERGEEFEYIGLSYYPFWHGSLDQLEFNMNDIAKRFNK
EEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEECHHHHHHHHCC
DLIIAEVSMGFTMDSYQEYEKLADSERKGYATKPELVEKIDYPMTIEGQADFTKDFLNRV
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHH
ANVVDDHGKGFFWWEPAWIPVPGSGWATPASLKYMNDPGPCGNEWANQALFDYDGNVLPA
HHHHHHCCCEEEEECCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHCCEECCCCCCCHH
LDVIKNFKK
HHHHHHCCC
>Mature Secondary Structure 
SKFIKGMDLSTLLELERCGAKYYEDGKEKDILDIMKEHDVDTIRLRLWNDPKSEEGEPY
CCHHCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
GAGNNDLAETIAIGKKVTDAGFGVLLNFHYSDFWADPGKQIKPKAWKDFGVDELEQAVYD
CCCCCHHHHHHHHCCHHCCCCCEEEEEECCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHH
FTLENLTKIIEAGVNVTMIQVGNELSNGLLWPEGKVPDYDNIAKFVNAGIRACRKVNADI
HHHHHHHHHHHCCCCEEEEEECCHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PIMIHLDNGGNNELYVRWFTNFIERGEEFEYIGLSYYPFWHGSLDQLEFNMNDIAKRFNK
EEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEECHHHHHHHHCC
DLIIAEVSMGFTMDSYQEYEKLADSERKGYATKPELVEKIDYPMTIEGQADFTKDFLNRV
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHH
ANVVDDHGKGFFWWEPAWIPVPGSGWATPASLKYMNDPGPCGNEWANQALFDYDGNVLPA
HHHHHHCCCEEEEECCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHCCEECCCCCCCHH
LDVIKNFKK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA