| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is dpiB [C]
Identifier: 238923727
GI number: 238923727
Start: 1223617
End: 1224936
Strand: Direct
Name: dpiB [C]
Synonym: EUBREC_1349
Alternate gene names: 238923727
Gene position: 1223617-1224936 (Clockwise)
Preceding gene: 238923726
Following gene: 238923728
Centisome position: 35.47
GC content: 28.71
Gene sequence:
>1320_bases ATGTTTGTTTACATTCAGAGTCTTTTGATTATGATGTTGGAAATATTATGCTGCAAAATTTTTTTTGAAGCATTTGGAAT AAAAAGAGAGGAAAATAATTGTTGGAAAAATTATAGTATAGTTATCGGATTGACAGTGCTTTGCTATTTTATTGCAATGA TTTTTCGAGACTATTTTATTGTAAAGCAGGTATTTTCAATTATTCTCATAACATTCTTTATGTTGCTTTATCTTAAACTG AGTTTTGGTAAGGCGATGATTTTATCAGCATTATTTGAGAGTCTTTTGCTCGTGATGGATTATTTCGCGTTACTTATGAA TATTTATATTTTTCATAACATGGAAGAAGTATGGGAATCACATGTTATACAGGGTTCATTGGTCGTTGTTTTAGGAAAGG CATTGTTACTTTTTGCTGTATTAATTATTAGAAATCATATGGAGAAAAAATCTTTGGCTATGCTGGCAGATACAGAATGG CTTCGGTTTATTTTTTTCCCTATTTTCACAATATGTGTTATTACAGCTATGATAAAAATGTCTGAAGATATAAAAAATAA AGCCCAGGAGAATTTATTTTTTGTTATAGCGTGTGGATTGGCGGGAATGAACATAGTTGTATTTTATTTAATATATGATA TTTTAAAACGAGAAAATAAATTGCAGGAGGAACGTATTTATAGGATACAGGTTAAAAACCAAATAGGTATGTATCGTTCT ATTTCTGAAAATTTTGATAAACAAAAGAAAATGACACATGAATATAAAAATCAGATTATGTGCATTGATTCTTTGATAAA AAAGAAGAAATATGATTCATTGGAAAGCTTTGTAAATAAAATCAGTGGTCAAATTAGTAAAGAATTGGATTTTATTTGTA CAAATAATGTGATTGTGGATGCGGTATTGAATACTAAATATCAGGAAATAAGGGATAAAGGTATTGTTTTTGTATTTAAA ATTAATGATTTATCATCTTTGAATATTAGCGATGAGGATGTTGTGGTTATTATGTCCAATTTATTAAACAATGCGATTGA AGCATGTGAAAAGTGCAGAGGGGATAAAATAATAAAATTGAAAATTGTTATAGAGGACAATAATGCGATTATATCGGTGA AAAATACTTATGAGAATGCTGTTATTTATGAAAATGGAGAGATACAGACTACAAAGATTCTGGATACAGATGAACATGGA ATAGGAATAAAAAATATAGCTGAAACAATAAGGAAGTACGGGGGCTCTTATGTGATTCAAAACGATGAACGAGAGTTTTA TTTTTCCATTATGATTCCTCTAGTGAAAAGTGATTTCTGA
Upstream 100 bases:
>100_bases ATACAGAGTATTGCTGAATAATGGAATTCTATTAGATATAGCTAGAGCGAGATATAAATATGTAGAAGAAAAGTTTATCG CTTATAGAGGTGAAGTATAA
Downstream 100 bases:
>100_bases GAACAAATCACTTTTTTGTCGTTTTCTGCAAAATAAGTACACTTTCTGCAATAGACCTTGTTAAGAAATTGTGTATTGTT ATACTTACAGTAGAAGGAGG
Product: sensor kinase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MFVYIQSLLIMMLEILCCKIFFEAFGIKREENNCWKNYSIVIGLTVLCYFIAMIFRDYFIVKQVFSIILITFFMLLYLKL SFGKAMILSALFESLLLVMDYFALLMNIYIFHNMEEVWESHVIQGSLVVVLGKALLLFAVLIIRNHMEKKSLAMLADTEW LRFIFFPIFTICVITAMIKMSEDIKNKAQENLFFVIACGLAGMNIVVFYLIYDILKRENKLQEERIYRIQVKNQIGMYRS ISENFDKQKKMTHEYKNQIMCIDSLIKKKKYDSLESFVNKISGQISKELDFICTNNVIVDAVLNTKYQEIRDKGIVFVFK INDLSSLNISDEDVVVIMSNLLNNAIEACEKCRGDKIIKLKIVIEDNNAIISVKNTYENAVIYENGEIQTTKILDTDEHG IGIKNIAETIRKYGGSYVIQNDEREFYFSIMIPLVKSDF
Sequences:
>Translated_439_residues MFVYIQSLLIMMLEILCCKIFFEAFGIKREENNCWKNYSIVIGLTVLCYFIAMIFRDYFIVKQVFSIILITFFMLLYLKL SFGKAMILSALFESLLLVMDYFALLMNIYIFHNMEEVWESHVIQGSLVVVLGKALLLFAVLIIRNHMEKKSLAMLADTEW LRFIFFPIFTICVITAMIKMSEDIKNKAQENLFFVIACGLAGMNIVVFYLIYDILKRENKLQEERIYRIQVKNQIGMYRS ISENFDKQKKMTHEYKNQIMCIDSLIKKKKYDSLESFVNKISGQISKELDFICTNNVIVDAVLNTKYQEIRDKGIVFVFK INDLSSLNISDEDVVVIMSNLLNNAIEACEKCRGDKIIKLKIVIEDNNAIISVKNTYENAVIYENGEIQTTKILDTDEHG IGIKNIAETIRKYGGSYVIQNDEREFYFSIMIPLVKSDF >Mature_439_residues MFVYIQSLLIMMLEILCCKIFFEAFGIKREENNCWKNYSIVIGLTVLCYFIAMIFRDYFIVKQVFSIILITFFMLLYLKL SFGKAMILSALFESLLLVMDYFALLMNIYIFHNMEEVWESHVIQGSLVVVLGKALLLFAVLIIRNHMEKKSLAMLADTEW LRFIFFPIFTICVITAMIKMSEDIKNKAQENLFFVIACGLAGMNIVVFYLIYDILKRENKLQEERIYRIQVKNQIGMYRS ISENFDKQKKMTHEYKNQIMCIDSLIKKKKYDSLESFVNKISGQISKELDFICTNNVIVDAVLNTKYQEIRDKGIVFVFK INDLSSLNISDEDVVVIMSNLLNNAIEACEKCRGDKIIKLKIVIEDNNAIISVKNTYENAVIYENGEIQTTKILDTDEHG IGIKNIAETIRKYGGSYVIQNDEREFYFSIMIPLVKSDF
Specific function: Member Of The Two-Component Regulatory System Dpia/Dpib Essential For Expression Of Citrate-Specific Fermentation Genes And Genes Involved In Plasmid Inheritance. May Activate Dpia By Phosphorylation. [C]
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 51102; Mature: 51102
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVYIQSLLIMMLEILCCKIFFEAFGIKREENNCWKNYSIVIGLTVLCYFIAMIFRDYFI CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKQVFSIILITFFMLLYLKLSFGKAMILSALFESLLLVMDYFALLMNIYIFHNMEEVWES HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HVIQGSLVVVLGKALLLFAVLIIRNHMEKKSLAMLADTEWLRFIFFPIFTICVITAMIKM HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEDIKNKAQENLFFVIACGLAGMNIVVFYLIYDILKRENKLQEERIYRIQVKNQIGMYRS HHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHH ISENFDKQKKMTHEYKNQIMCIDSLIKKKKYDSLESFVNKISGQISKELDFICTNNVIVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEE AVLNTKYQEIRDKGIVFVFKINDLSSLNISDEDVVVIMSNLLNNAIEACEKCRGDKIIKL HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE KIVIEDNNAIISVKNTYENAVIYENGEIQTTKILDTDEHGIGIKNIAETIRKYGGSYVIQ EEEEECCCEEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE NDEREFYFSIMIPLVKSDF CCCCEEEHEEEHHHHHCCC >Mature Secondary Structure MFVYIQSLLIMMLEILCCKIFFEAFGIKREENNCWKNYSIVIGLTVLCYFIAMIFRDYFI CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKQVFSIILITFFMLLYLKLSFGKAMILSALFESLLLVMDYFALLMNIYIFHNMEEVWES HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HVIQGSLVVVLGKALLLFAVLIIRNHMEKKSLAMLADTEWLRFIFFPIFTICVITAMIKM HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEDIKNKAQENLFFVIACGLAGMNIVVFYLIYDILKRENKLQEERIYRIQVKNQIGMYRS HHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHH ISENFDKQKKMTHEYKNQIMCIDSLIKKKKYDSLESFVNKISGQISKELDFICTNNVIVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEE AVLNTKYQEIRDKGIVFVFKINDLSSLNISDEDVVVIMSNLLNNAIEACEKCRGDKIIKL HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE KIVIEDNNAIISVKNTYENAVIYENGEIQTTKILDTDEHGIGIKNIAETIRKYGGSYVIQ EEEEECCCEEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE NDEREFYFSIMIPLVKSDF CCCCEEEHEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA