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The map label for this gene is recJ [H]

Identifier: 238923690

GI number: 238923690

Start: 1189053

End: 1190813

Strand: Direct

Name: recJ [H]

Synonym: EUBREC_1312

Alternate gene names: 238923690

Gene position: 1189053-1190813 (Clockwise)

Preceding gene: 238923689

Following gene: 238923691

Centisome position: 34.47

GC content: 43.9

Gene sequence:

>1761_bases
ATGGCAAAGTGGTATGTTAGTGCGAAGAGGGCTGATTTTGCGGCAATCGGAGCGAAGTTTGGAATAGATCAGGTGACGGC
GCGGATAATCAGAAACAGAGGTGTTATAGGAGATGACGCGGTAAATGAATTTTTAAACGGCAAACTCTCAGACATTGCAG
ACCCGGCTCTTTTAAAGGATGGTCAGAGGCTGGTTGACATTCTTGCCCAAAAGATAGCTGACAAGGTCAAAATCAGGATA
ATCGGCGACTATGACATAGACGGAGTGATGTCTACATATATTCTTGTGAAGGCACTTAAAAGAGCCGGTGCATGTGTGGA
TTATATGATTCCCGACAGAGTGAAGGATGGCTATGGTTTGAATGTGCATCTGATTGACAAGGCATATGAGGATGGGATAG
ACACTGTGGTCACCTGTGACAACGGAATTGCAGCGATTGAGGAAATCGCACATGCAAAGGAGCTTGGAATGACGGTTCTC
GTAACAGACCACCATGCAGTGCCGTTTGAAGATATAAAGGGTATAAAGATTTACAAGGAGAGCAAAGCAGATGCCGTTGT
AAATCCGCATCAGATAGAGTGCAGCTATCCGTACAAGGAGCTTTGCGGAGCAGCTGTTGCCTGGAAAATTGTCATATTAC
TATATAGAAAAATCGGCATAGATGAGAAAGAGACCATGGATTTTATAGAGAATGTGGCATTTGCAACAGTCGGTGATGTC
ATGCCGCTGACGGGTGAAAACCGTATACTTGTAAAGGCCGGTTTAAAGAGTATTCATCATACGACAAATATCGGCATGAA
AGCCCTGCTTGAATGTTGTAATATAGAGGCTGAAAATGTAGATGCATATCATTTTGGATTTGTTCTTGGACCCTGTGTCA
ATGCGACAGGCCGTCTGGATACAGCCAAAAGAGCACTTGAGCTGTTTTTATGTGACAGGCAGGAGGAGGCCATGCGCATC
GCATCAGAGCTTGTAGCGCTCAATGATGACAGGAAGGAAATGACTGCAAAGGGTGTGGAAACCGCAGTTGAGATATATGA
GAGGGACAATTACGAAAAAGACAGGGTGCTTGTCATATATCTGCCGGATGTGCATGAGAGCATAGCAGGAATCATAGCAG
GCCGTATCAGGGAGAAATACAATAAGCCAACCTTTATACTCACAAAGAGTGAGGACGGAGTAAAGGGCTCAGGCCGCTCG
ATAGAGGAGTACTCCATGTATGAGGAAATGTGCAAATGCAGTGAGCTGTTCACGAAGTTTGGTGGCCATCCGATGGCTGC
AGGACTTTCACTGCCACAAGAAAACGTTGAGCCATTCCGTCAGAAAATAAATGAGTATGCATCGCTTACTGACGATGACC
TCGTGCCTAAAATACATATAGATGTGCCGATGCCGGTGGATTATGTATCAATGAGACTGGTGTCTGAGTTTTCAGTACTG
GCACCGTTTGGAAAGGACAATCCAAAGCCTGTTTTTGCGGATAAAAATCTACGTGTGAGCCGCATGTGGGTAGTGGGTAA
AAACAACAATGTGCTTAGACTTTCTTTGATATCCTCATATGGCACGCCAATCAATGCAATTTATTTTGGTGATATAGAAA
GCTTTTTTGATTATATCAGGCAAAGGTTTGGTTCTGACGCGCTTGAAGCTGCACAAAGAGGAAGGTTCAATAATATAGTG
CTGTCCGTAGTATATTCACCAAAGATAAATGTATTCAGGGAAAATGAGTCACTGCAGTTTGAAATACAGTATTATAAGTG
A

Upstream 100 bases:

>100_bases
AAAAATCCGGATGCTGTGATGGAAATTTTAGCTTCAAAGGATAGGGCACAGGCAGGCTACACAGCACCGGCGTGTGGGCT
GAGACTGGAAAGGGTAGATT

Downstream 100 bases:

>100_bases
TATTATATTCTAAAAAGGTAACCGGTAAAGGAGAATAGATCAGTGTTTGGGAACAGAGCAAAAATATCCGCTGAGGAATT
AGCGTATATGAAGGAACAAT

Product: SsDNA exonuclease, RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MAKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKLSDIADPALLKDGQRLVDILAQKIADKVKIRI
IGDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGLNVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVL
VTDHHAVPFEDIKGIKIYKESKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDV
MPLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLDTAKRALELFLCDRQEEAMRI
ASELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIYLPDVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRS
IEEYSMYEEMCKCSELFTKFGGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVL
APFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIRQRFGSDALEAAQRGRFNNIV
LSVVYSPKINVFRENESLQFEIQYYK

Sequences:

>Translated_586_residues
MAKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKLSDIADPALLKDGQRLVDILAQKIADKVKIRI
IGDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGLNVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVL
VTDHHAVPFEDIKGIKIYKESKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDV
MPLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLDTAKRALELFLCDRQEEAMRI
ASELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIYLPDVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRS
IEEYSMYEEMCKCSELFTKFGGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVL
APFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIRQRFGSDALEAAQRGRFNNIV
LSVVYSPKINVFRENESLQFEIQYYK
>Mature_585_residues
AKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKLSDIADPALLKDGQRLVDILAQKIADKVKIRII
GDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGLNVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVLV
TDHHAVPFEDIKGIKIYKESKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDVM
PLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLDTAKRALELFLCDRQEEAMRIA
SELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIYLPDVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRSI
EEYSMYEEMCKCSELFTKFGGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVLA
PFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIRQRFGSDALEAAQRGRFNNIVL
SVVYSPKINVFRENESLQFEIQYYK

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=545, Percent_Identity=32.6605504587156, Blast_Score=268, Evalue=7e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65581; Mature: 65450

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKLSDIADPALLKD
CCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCHHHHC
GQRLVDILAQKIADKVKIRIIGDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGL
CHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
NVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVLVTDHHAVPFEDIKGIKIYKE
EEEEECCHHHCCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCEEEEEC
SKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDV
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
MPLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLD
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCHH
TAKRALELFLCDRQEEAMRIASELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIY
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LPDVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRSIEEYSMYEEMCKCSELFTKF
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
APFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIR
CCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHH
QRFGSDALEAAQRGRFNNIVLSVVYSPKINVFRENESLQFEIQYYK
HHHCCHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEEEEC
>Mature Secondary Structure 
AKWYVSAKRADFAAIGAKFGIDQVTARIIRNRGVIGDDAVNEFLNGKLSDIADPALLKD
CCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCHHHHC
GQRLVDILAQKIADKVKIRIIGDYDIDGVMSTYILVKALKRAGACVDYMIPDRVKDGYGL
CHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
NVHLIDKAYEDGIDTVVTCDNGIAAIEEIAHAKELGMTVLVTDHHAVPFEDIKGIKIYKE
EEEEECCHHHCCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCEEEEEC
SKADAVVNPHQIECSYPYKELCGAAVAWKIVILLYRKIGIDEKETMDFIENVAFATVGDV
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
MPLTGENRILVKAGLKSIHHTTNIGMKALLECCNIEAENVDAYHFGFVLGPCVNATGRLD
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCHH
TAKRALELFLCDRQEEAMRIASELVALNDDRKEMTAKGVETAVEIYERDNYEKDRVLVIY
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LPDVHESIAGIIAGRIREKYNKPTFILTKSEDGVKGSGRSIEEYSMYEEMCKCSELFTKF
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GGHPMAAGLSLPQENVEPFRQKINEYASLTDDDLVPKIHIDVPMPVDYVSMRLVSEFSVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
APFGKDNPKPVFADKNLRVSRMWVVGKNNNVLRLSLISSYGTPINAIYFGDIESFFDYIR
CCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHH
QRFGSDALEAAQRGRFNNIVLSVVYSPKINVFRENESLQFEIQYYK
HHHCCHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]