| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238923688
Identifier: 238923688
GI number: 238923688
Start: 1187811
End: 1188197
Strand: Direct
Name: 238923688
Synonym: EUBREC_1310
Alternate gene names: NA
Gene position: 1187811-1188197 (Clockwise)
Preceding gene: 238923687
Following gene: 238923689
Centisome position: 34.43
GC content: 47.29
Gene sequence:
>387_bases ATGACACAGTGGGGCTCTAAAAGTCTCGGTGATCAGGGATACAGTGCAATTGAGATACTCAGATACTTTTACGGCAGCAA CATGTATATCAATACAGCGGAGGCTGTATCAGGAATCCCGGCGTCATGGCCCGGCTACAATATAGGCATAGGCTCGTCAG GGCAGAATGTATACCAGATACAAAAACAGCTCGCCCGCATCGCAAAGGCATATCCGGCCATTCCGTCTATTGTGCCGGAT GGAATATACGGACCAAAGACAAAGGCTGCCGTGGAAAAATTTCAGGCTGTATTCGGACTTCCGGTTTCAGGTGTGGTGGA CTACAATACATGGTATGAGATATCAAATATATATGTCGCTGTGACACGTATTGCGGAGCTTGCTTAA
Upstream 100 bases:
>100_bases ATCAAAGTATACCAATGAGCTTCCAACGGATTCAACGAATTAAATAGTTATTATCTCGGAATTATATGAAATTATTACTA TATACGCAAATACAATTTGG
Downstream 100 bases:
>100_bases TTGGATTAAAGGAGCAAAACAGTGCTGGCAAGAGAAAAAATGATGTGATATTATATAAAATAAAAGTAACTATTCACAAC CCTATTTTTCAGATAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Cortex-Lytic Pre-Pro-Form; Spore Cortex-Lytic Protein; Spore Peptidoglycan Hydrolase
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTQWGSKSLGDQGYSAIEILRYFYGSNMYINTAEAVSGIPASWPGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPD GIYGPKTKAAVEKFQAVFGLPVSGVVDYNTWYEISNIYVAVTRIAELA
Sequences:
>Translated_128_residues MTQWGSKSLGDQGYSAIEILRYFYGSNMYINTAEAVSGIPASWPGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPD GIYGPKTKAAVEKFQAVFGLPVSGVVDYNTWYEISNIYVAVTRIAELA >Mature_127_residues TQWGSKSLGDQGYSAIEILRYFYGSNMYINTAEAVSGIPASWPGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPDG IYGPKTKAAVEKFQAVFGLPVSGVVDYNTWYEISNIYVAVTRIAELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13907; Mature: 13776
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQWGSKSLGDQGYSAIEILRYFYGSNMYINTAEAVSGIPASWPGYNIGIGSSGQNVYQI CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHH QKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFGLPVSGVVDYNTWYEISNIYVA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHH VTRIAELA HHHHHHCC >Mature Secondary Structure TQWGSKSLGDQGYSAIEILRYFYGSNMYINTAEAVSGIPASWPGYNIGIGSSGQNVYQI CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHH QKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFGLPVSGVVDYNTWYEISNIYVA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHH VTRIAELA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA