| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923678
Identifier: 238923678
GI number: 238923678
Start: 1178480
End: 1179202
Strand: Direct
Name: 238923678
Synonym: EUBREC_1300
Alternate gene names: NA
Gene position: 1178480-1179202 (Clockwise)
Preceding gene: 238923677
Following gene: 238923679
Centisome position: 34.16
GC content: 36.1
Gene sequence:
>723_bases ATGGGAAACTTTGGAATTAAAATAATGACAGAAACTGATTCATTTCATACAAGTGAATTAGGACTTAAAATGACAGCACT TAAGATTCCATTCCCGAACCCAAAAACCAATTATATTTCGGTACCAGGCGCCTCTGGCAATATTGATTTGTCGGAGGTGT TTGGCAGGGTATTATATGAGGATAGAAGCAATGTAACATTTGAGTTTGTTCTTCGTGGAAATTTTGATTTATGGGAGGTT GTTACGTTTAGGATTGCCACTATGATACATGGGAAAAAATGCAAGGTGATTGTAGACAATGACCTTAGTCACTATTATGT ATGTAGGCTGTCTGTTGACCGTAGCAAATCAAAAAGAAGTGTTGGAACTATAACCTTAAGTGGAACAGCCGAATCATTTA AATATGATATTTATAATACGGCTGAAGAATGGCTTTGGGATACGTTTGACTTTGAAGAGGGAGTACTGCGTGAATATAAT GAAATCACTGTAAATGAATACAATAAAGAACTTGTATTAATAGGCGGAATTATGCCGCAGGTGCCAGTTTTTACCGTAAA AAATGTAAATGAATTAAAACTGACATATGCAGGAAGAACTTATGATATGCCGGAGGATGGTACATATCGTTTCCCGGCCA TAGTTGTAGCAGAAAATGATATAACTCTTAGTTTTACAGGAACTGGAATTGTAACCATAAATTACAGAGGAGCATACCTA TGA
Upstream 100 bases:
>100_bases GAGTGTAAATATTGATGGCAAGAGAGCAGGAAAGATTATAGCACCTCACGTAGATGCTGCATTGGGCGATTTTGCAACAG TGAGAACATAAGGAGAGTAT
Downstream 100 bases:
>100_bases TATATGAAGTTTTACTTGATGGAAAAACACTATATTTTCCGAATGATAAAGAGGCTGTTATTTGTGATGCAACGCTGACA CAGGCATTAAATGATGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGNFGIKIMTETDSFHTSELGLKMTALKIPFPNPKTNYISVPGASGNIDLSEVFGRVLYEDRSNVTFEFVLRGNFDLWEV VTFRIATMIHGKKCKVIVDNDLSHYYVCRLSVDRSKSKRSVGTITLSGTAESFKYDIYNTAEEWLWDTFDFEEGVLREYN EITVNEYNKELVLIGGIMPQVPVFTVKNVNELKLTYAGRTYDMPEDGTYRFPAIVVAENDITLSFTGTGIVTINYRGAYL
Sequences:
>Translated_240_residues MGNFGIKIMTETDSFHTSELGLKMTALKIPFPNPKTNYISVPGASGNIDLSEVFGRVLYEDRSNVTFEFVLRGNFDLWEV VTFRIATMIHGKKCKVIVDNDLSHYYVCRLSVDRSKSKRSVGTITLSGTAESFKYDIYNTAEEWLWDTFDFEEGVLREYN EITVNEYNKELVLIGGIMPQVPVFTVKNVNELKLTYAGRTYDMPEDGTYRFPAIVVAENDITLSFTGTGIVTINYRGAYL >Mature_239_residues GNFGIKIMTETDSFHTSELGLKMTALKIPFPNPKTNYISVPGASGNIDLSEVFGRVLYEDRSNVTFEFVLRGNFDLWEVV TFRIATMIHGKKCKVIVDNDLSHYYVCRLSVDRSKSKRSVGTITLSGTAESFKYDIYNTAEEWLWDTFDFEEGVLREYNE ITVNEYNKELVLIGGIMPQVPVFTVKNVNELKLTYAGRTYDMPEDGTYRFPAIVVAENDITLSFTGTGIVTINYRGAYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27236; Mature: 27105
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFGIKIMTETDSFHTSELGLKMTALKIPFPNPKTNYISVPGASGNIDLSEVFGRVLYE CCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHCC DRSNVTFEFVLRGNFDLWEVVTFRIATMIHGKKCKVIVDNDLSHYYVCRLSVDRSKSKRS CCCCCEEEEEEECCCCHHHHHHHHHHHEECCCEEEEEEECCCCEEEEEEEEECCCCCCCE VGTITLSGTAESFKYDIYNTAEEWLWDTFDFEEGVLREYNEITVNEYNKELVLIGGIMPQ EEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCHHHHCCEEEEECCCCEEEEEECCCCC VPVFTVKNVNELKLTYAGRTYDMPEDGTYRFPAIVVAENDITLSFTGTGIVTINYRGAYL CCEEEECCCCEEEEEECCCEECCCCCCCEECCEEEEECCCEEEEEECCEEEEEEECCCCC >Mature Secondary Structure GNFGIKIMTETDSFHTSELGLKMTALKIPFPNPKTNYISVPGASGNIDLSEVFGRVLYE CCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCEEHHHHHHHHHCC DRSNVTFEFVLRGNFDLWEVVTFRIATMIHGKKCKVIVDNDLSHYYVCRLSVDRSKSKRS CCCCCEEEEEEECCCCHHHHHHHHHHHEECCCEEEEEEECCCCEEEEEEEEECCCCCCCE VGTITLSGTAESFKYDIYNTAEEWLWDTFDFEEGVLREYNEITVNEYNKELVLIGGIMPQ EEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCHHHHCCEEEEECCCCEEEEEECCCCC VPVFTVKNVNELKLTYAGRTYDMPEDGTYRFPAIVVAENDITLSFTGTGIVTINYRGAYL CCEEEECCCCEEEEEECCCEECCCCCCCEECCEEEEECCCEEEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA