| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923677
Identifier: 238923677
GI number: 238923677
Start: 1176020
End: 1178470
Strand: Direct
Name: 238923677
Synonym: EUBREC_1299
Alternate gene names: NA
Gene position: 1176020-1178470 (Clockwise)
Preceding gene: 238923676
Following gene: 238923678
Centisome position: 34.09
GC content: 45.0
Gene sequence:
>2451_bases ATGAGCGACCCAAAATTAATAATTAAAACACTGCTGGACAACAGCCAGCTTAAGTCCGGATTATCGGACATGAACAGCAT GGTATCCGGTGCATCGGCCAAGGTTGGAACCTTTGCAAAGGTAGGGGCGGCAGCAGTCGGAACTGCAGTCACAGCAGGTA CCACGGCGGCGGCTGCACTGGTAAAGAAGTCAGTGGAAGGATATGCAACCTTTGAGCAGATGGTCGGAGGAGTTGAGACA CTGTTTGGAGCAGGCGGACAGAGCATGGAAGAATATGCACAGTCCACAGGCAAGACAGTGGGAGAGATAGAGAGTAAGTA TAACTCCCTGATGACAGCACAGACCACTATGCTCAACAATGCCAACAACGCATACAAGACTGCAGGCCTTTCAGCCAATA ATTACATGGAGACTGTAACAAGCTTCAGTGCAAGCCTTATACAGTCACTTGGAGGAGATACTGAAAAAGCCGCAAATTAT GCAGACAGAGCTATCACGGATATGTCAGATAACTCTAACAAGCTGGGTACTAACATGCATGATATCCAGAATGCATACCA GGGCTTTGCAAAGCAGAACTATACCATGCTTGACAACTTAAAGCTTGGATATGGCGGTACACAGGAAGAAATGAAGCGAC TCATCAAGGATGCTTCACAGATGACTGATGTACAGCAGAAACTTGGTGTGACTGTAGATGAAAGCAGTCTGTCGTTTGGA AATATCGTAAATGCCATTTCTGTAATGCAGGAGAGCTTAGGTATTGCCGGTACCACATCAAAAGAAGCTGCAACCACTAT TGAGGGTTCGTTGAACAGTGCAAAAGCAGCGTGGGAGAACCTTGTTGTTGGAATGGCAGACGATAATGCAGATTTTGATA CACTTGTACAGAATTTCGTTGATACTGCATCCACAGCTGTTGAGAACATGCTTCCTCGTATAGAGATAGCACTAACAGGA CTGGGACAACTGATAGAGAAACTGCTTCCAGTCATAGTACAGAAGGTACCGGAGATTATAATGCAGACTCTTCCGGGACT GATAAACGCGGGAATACAGATGGTATCGGCACTGGGACAGGGACTGATGCAGTATCTTCCGGAGCTGATTTCGTATGCTA CACAGCTTGTGGTACAGCTTGTACAGGGGCTGGTGTCAGCACTGCCAAAGATTGTTGAGTTTGCTTCACAGCTTATCGAG ACAATAGTTACATCACTGATAAATGCAGCACCGGATCTTATAGAGGCCGGCAAAGAACTCATAGAGTTTCTTGTAAACGG AATTGCTGAAAATCTGCCAAACATAGTCCAGACAATTACAGACCTGATTTCAAATATTAATTCTTTCTGGGCGGAGAACG GTCCGGAGTTTATCAAATGGGGAACCGACCTACTCAGCAACTTGATAGACGGAATCATACAGGCCGTGCCGGTATTACTG CAGAATCTGCCGGGAATTATCCAGTCCATGGTAGCGGGGCTGTTAAATAATGGCCCAGTACTCATTGAGTGTGGTCTTAA ACTTCTGTTGCAACTTATTGAGGGAATTTTATCATGCATACCGGATATACTGGCAGCAATACCGCAGATAATAGCCGCGA TAGTTGAAGCTTTTGTTAATTACGATTGGCTTGGACTGGGAGCCGAGGTTATAAATTTTGTGAAGGATGGAATGGGAGAA AGCTGGGACAACATAGTTGCTTTCTTCACAGAAACCATACCAAACTTTATCCAGTCGATATTTGACTGGTTTAATGAACT TCCCGGAAAACTCCTAGAGTGGGGACAGAACGTATACACAACAGTTACAACGGCTATATCAGACATGATAACTGCAGCAG TTGGGTTCATATCGGAACTTCCGGATAAAATAGCTTACTGGATAGGCTTTGCGCTTGGCAAGGTTGTAGAATGGGGCTCT AACATGAGAGAAAAAGGAAAAGCAGCCGCAAAAGGACTGTTCGATTCGGTAGTCAACGGACTTGCAAATCTCCCGAACAA AATTATGAGTACAGGAAAAAATATAGTATCAGGTCTTTGGAAAGGCATCAAAGGAGCATGGAGTGGACTGACAAAGAAAG TCAGCAACCTCGCAGGAAAACTGTTACAAGGATTCAAGGATGCGCTTGGCATCCACTCTCCGTCACGTAAATTTAAGTGG GTTGGAGAAATGTGCGTAGCCGGCATGGATGAACCTATAGCAGACTACAATCCTTACGATACGCTTAATAAGTCTATTAA GGCAAATGAATCTACCATGAAAGCAAACTTTGTGGGAAGCGGTTCATACGCGGCCACATACAATGCGGTATATGACTATG ATGCGCAGGCACAGGCTACAGCAAGGGCACTAAAAGGCATGAGTGTAAATATTGATGGCAAGAGAGCAGGAAAGATTATA GCACCTCACGTAGATGCTGCATTGGGCGATTTTGCAACAGTGAGAACATAA
Upstream 100 bases:
>100_bases ACAGAGGAAGAGAAAGCTGCAGATGAAGAGTTTGAGAAATACTTCGAAGGATAGATAGAGCCGGAGCCTTAGAGCCAGAG CCTTAAGAAAGGAGCTGGCA
Downstream 100 bases:
>100_bases GGAGAGTATATGGGAAACTTTGGAATTAAAATAATGACAGAAACTGATTCATTTCATACAAGTGAATTAGGACTTAAAAT GACAGCACTTAAGATTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tape Measure Protein; Phage Tail Tape Measure Protein; Phage Tail Tape Measure Protein Family; Prophage LambdaSa1 PblA Protein InteRNAl Deletion; Truncated Phage Protein; Phage-Related Protein Gp; Tail Protein; Phage-Related Minor Tail Protein; Phage Tale Measure Protein; TMP Repeat Protein
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MSDPKLIIKTLLDNSQLKSGLSDMNSMVSGASAKVGTFAKVGAAAVGTAVTAGTTAAAALVKKSVEGYATFEQMVGGVET LFGAGGQSMEEYAQSTGKTVGEIESKYNSLMTAQTTMLNNANNAYKTAGLSANNYMETVTSFSASLIQSLGGDTEKAANY ADRAITDMSDNSNKLGTNMHDIQNAYQGFAKQNYTMLDNLKLGYGGTQEEMKRLIKDASQMTDVQQKLGVTVDESSLSFG NIVNAISVMQESLGIAGTTSKEAATTIEGSLNSAKAAWENLVVGMADDNADFDTLVQNFVDTASTAVENMLPRIEIALTG LGQLIEKLLPVIVQKVPEIIMQTLPGLINAGIQMVSALGQGLMQYLPELISYATQLVVQLVQGLVSALPKIVEFASQLIE TIVTSLINAAPDLIEAGKELIEFLVNGIAENLPNIVQTITDLISNINSFWAENGPEFIKWGTDLLSNLIDGIIQAVPVLL QNLPGIIQSMVAGLLNNGPVLIECGLKLLLQLIEGILSCIPDILAAIPQIIAAIVEAFVNYDWLGLGAEVINFVKDGMGE SWDNIVAFFTETIPNFIQSIFDWFNELPGKLLEWGQNVYTTVTTAISDMITAAVGFISELPDKIAYWIGFALGKVVEWGS NMREKGKAAAKGLFDSVVNGLANLPNKIMSTGKNIVSGLWKGIKGAWSGLTKKVSNLAGKLLQGFKDALGIHSPSRKFKW VGEMCVAGMDEPIADYNPYDTLNKSIKANESTMKANFVGSGSYAATYNAVYDYDAQAQATARALKGMSVNIDGKRAGKII APHVDAALGDFATVRT
Sequences:
>Translated_816_residues MSDPKLIIKTLLDNSQLKSGLSDMNSMVSGASAKVGTFAKVGAAAVGTAVTAGTTAAAALVKKSVEGYATFEQMVGGVET LFGAGGQSMEEYAQSTGKTVGEIESKYNSLMTAQTTMLNNANNAYKTAGLSANNYMETVTSFSASLIQSLGGDTEKAANY ADRAITDMSDNSNKLGTNMHDIQNAYQGFAKQNYTMLDNLKLGYGGTQEEMKRLIKDASQMTDVQQKLGVTVDESSLSFG NIVNAISVMQESLGIAGTTSKEAATTIEGSLNSAKAAWENLVVGMADDNADFDTLVQNFVDTASTAVENMLPRIEIALTG LGQLIEKLLPVIVQKVPEIIMQTLPGLINAGIQMVSALGQGLMQYLPELISYATQLVVQLVQGLVSALPKIVEFASQLIE TIVTSLINAAPDLIEAGKELIEFLVNGIAENLPNIVQTITDLISNINSFWAENGPEFIKWGTDLLSNLIDGIIQAVPVLL QNLPGIIQSMVAGLLNNGPVLIECGLKLLLQLIEGILSCIPDILAAIPQIIAAIVEAFVNYDWLGLGAEVINFVKDGMGE SWDNIVAFFTETIPNFIQSIFDWFNELPGKLLEWGQNVYTTVTTAISDMITAAVGFISELPDKIAYWIGFALGKVVEWGS NMREKGKAAAKGLFDSVVNGLANLPNKIMSTGKNIVSGLWKGIKGAWSGLTKKVSNLAGKLLQGFKDALGIHSPSRKFKW VGEMCVAGMDEPIADYNPYDTLNKSIKANESTMKANFVGSGSYAATYNAVYDYDAQAQATARALKGMSVNIDGKRAGKII APHVDAALGDFATVRT >Mature_815_residues SDPKLIIKTLLDNSQLKSGLSDMNSMVSGASAKVGTFAKVGAAAVGTAVTAGTTAAAALVKKSVEGYATFEQMVGGVETL FGAGGQSMEEYAQSTGKTVGEIESKYNSLMTAQTTMLNNANNAYKTAGLSANNYMETVTSFSASLIQSLGGDTEKAANYA DRAITDMSDNSNKLGTNMHDIQNAYQGFAKQNYTMLDNLKLGYGGTQEEMKRLIKDASQMTDVQQKLGVTVDESSLSFGN IVNAISVMQESLGIAGTTSKEAATTIEGSLNSAKAAWENLVVGMADDNADFDTLVQNFVDTASTAVENMLPRIEIALTGL GQLIEKLLPVIVQKVPEIIMQTLPGLINAGIQMVSALGQGLMQYLPELISYATQLVVQLVQGLVSALPKIVEFASQLIET IVTSLINAAPDLIEAGKELIEFLVNGIAENLPNIVQTITDLISNINSFWAENGPEFIKWGTDLLSNLIDGIIQAVPVLLQ NLPGIIQSMVAGLLNNGPVLIECGLKLLLQLIEGILSCIPDILAAIPQIIAAIVEAFVNYDWLGLGAEVINFVKDGMGES WDNIVAFFTETIPNFIQSIFDWFNELPGKLLEWGQNVYTTVTTAISDMITAAVGFISELPDKIAYWIGFALGKVVEWGSN MREKGKAAAKGLFDSVVNGLANLPNKIMSTGKNIVSGLWKGIKGAWSGLTKKVSNLAGKLLQGFKDALGIHSPSRKFKWV GEMCVAGMDEPIADYNPYDTLNKSIKANESTMKANFVGSGSYAATYNAVYDYDAQAQATARALKGMSVNIDGKRAGKIIA PHVDAALGDFATVRT
Specific function: Unknown
COG id: COG5412
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86942; Mature: 86810
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPKLIIKTLLDNSQLKSGLSDMNSMVSGASAKVGTFAKVGAAAVGTAVTAGTTAAAAL CCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKKSVEGYATFEQMVGGVETLFGAGGQSMEEYAQSTGKTVGEIESKYNSLMTAQTTMLNN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC ANNAYKTAGLSANNYMETVTSFSASLIQSLGGDTEKAANYADRAITDMSDNSNKLGTNMH CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH DIQNAYQGFAKQNYTMLDNLKLGYGGTQEEMKRLIKDASQMTDVQQKLGVTVDESSLSFG HHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHH NIVNAISVMQESLGIAGTTSKEAATTIEGSLNSAKAAWENLVVGMADDNADFDTLVQNFV HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHH DTASTAVENMLPRIEIALTGLGQLIEKLLPVIVQKVPEIIMQTLPGLINAGIQMVSALGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMQYLPELISYATQLVVQLVQGLVSALPKIVEFASQLIETIVTSLINAAPDLIEAGKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IEFLVNGIAENLPNIVQTITDLISNINSFWAENGPEFIKWGTDLLSNLIDGIIQAVPVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNLPGIIQSMVAGLLNNGPVLIECGLKLLLQLIEGILSCIPDILAAIPQIIAAIVEAFVN HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDWLGLGAEVINFVKDGMGESWDNIVAFFTETIPNFIQSIFDWFNELPGKLLEWGQNVYT CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH TVTTAISDMITAAVGFISELPDKIAYWIGFALGKVVEWGSNMREKGKAAAKGLFDSVVNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LANLPNKIMSTGKNIVSGLWKGIKGAWSGLTKKVSNLAGKLLQGFKDALGIHSPSRKFKW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VGEMCVAGMDEPIADYNPYDTLNKSIKANESTMKANFVGSGSYAATYNAVYDYDAQAQAT HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCCCEEECHHCCCCCHHHHH ARALKGMSVNIDGKRAGKIIAPHVDAALGDFATVRT HHHHCCCCCCCCCCCCCCEECCHHHHHHHCHHHCCC >Mature Secondary Structure SDPKLIIKTLLDNSQLKSGLSDMNSMVSGASAKVGTFAKVGAAAVGTAVTAGTTAAAAL CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKKSVEGYATFEQMVGGVETLFGAGGQSMEEYAQSTGKTVGEIESKYNSLMTAQTTMLNN HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC ANNAYKTAGLSANNYMETVTSFSASLIQSLGGDTEKAANYADRAITDMSDNSNKLGTNMH CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH DIQNAYQGFAKQNYTMLDNLKLGYGGTQEEMKRLIKDASQMTDVQQKLGVTVDESSLSFG HHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHH NIVNAISVMQESLGIAGTTSKEAATTIEGSLNSAKAAWENLVVGMADDNADFDTLVQNFV HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHH DTASTAVENMLPRIEIALTGLGQLIEKLLPVIVQKVPEIIMQTLPGLINAGIQMVSALGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMQYLPELISYATQLVVQLVQGLVSALPKIVEFASQLIETIVTSLINAAPDLIEAGKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IEFLVNGIAENLPNIVQTITDLISNINSFWAENGPEFIKWGTDLLSNLIDGIIQAVPVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNLPGIIQSMVAGLLNNGPVLIECGLKLLLQLIEGILSCIPDILAAIPQIIAAIVEAFVN HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDWLGLGAEVINFVKDGMGESWDNIVAFFTETIPNFIQSIFDWFNELPGKLLEWGQNVYT CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH TVTTAISDMITAAVGFISELPDKIAYWIGFALGKVVEWGSNMREKGKAAAKGLFDSVVNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LANLPNKIMSTGKNIVSGLWKGIKGAWSGLTKKVSNLAGKLLQGFKDALGIHSPSRKFKW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VGEMCVAGMDEPIADYNPYDTLNKSIKANESTMKANFVGSGSYAATYNAVYDYDAQAQAT HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCCCEEECHHCCCCCHHHHH ARALKGMSVNIDGKRAGKIIAPHVDAALGDFATVRT HHHHCCCCCCCCCCCCCCEECCHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA