| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923621
Identifier: 238923621
GI number: 238923621
Start: 1141262
End: 1142131
Strand: Direct
Name: 238923621
Synonym: EUBREC_1243
Alternate gene names: NA
Gene position: 1141262-1142131 (Clockwise)
Preceding gene: 238923620
Following gene: 238923622
Centisome position: 33.08
GC content: 42.18
Gene sequence:
>870_bases ATGATTTATATATTTAGCGCTTTTTATGCTGAGGCAAAAAATATAATAGACCACTATGGCTTAAAAAAGGAAAAAAGCCC TGAAATGGTGAGATTTGATGTGTTTGCAAATGAGAGTATCAGGCTTGTGATAACAGGCGTAGGAGAAATCAATGCGGCGG CAGCGGTTTCAAATATCGGTGGTGCGTATGGGATTTCACCGGATGATGAGATTTTGAATGTGGGGTGTGGCGCTGGTTTT AGCAGTGATATCTGTTTGGGCAGTATATTTCTGGGAAACAAGCTCACTGAGCAGATGACAGGGCGTACATTTTACCCCGA TATGCTGATGAAAGCAAATTTCAGGGAGTGTGAGATAGTAACGGTCGCAAGGGTGCTTAATGAAGGGAGCGATTCGGTTG TATATGATATGGAGGCAGCCGCCGTTTATCAGGCAGCAGCGTTTTTCGTGGGACCGCATCGTATGCATTTTATAAAGCTT GTTTCAGATGCCGGTGAGAGAATTGACCAGTCGAAAATCACAGAGCTTTTTGCTTTGCAGGAAGACAAAATATGCGGCTA TATTGATAGGCTTTTAAGTGTAGGTGGTAATAAAACTTCAATAGATGATAAGACTAGAGGCGAAAATATGGCAGACTGCA ATGCGACAGATGATACTAAATCCGCTTGGAATATTGACAGGCTGACCAGCGATATGCGCTGTTCCAAGGTAATGGGAGAT CAGCTGGCACAGCTTATAAAGTATTGCAGATTAAGTGGTATAGATTATAAAGCTGTTCTGGATGAGTACTATACAAATGG CTTGCTGCCGTGTGAGAGCAAGCGTGAAGGAAAGAAATGTCTGTTTGAATTGAAACAGAGATTGTTGTAA
Upstream 100 bases:
>100_bases ATGAAAAGCTCATGGTTGGAAGCAACAGGACAAGGCTTTTAAAGGAGCTTGAGAGATAAATCCTGTTGATGTATGCAGGG AAGATTTGAAGGAATTATCT
Downstream 100 bases:
>100_bases GAAGGAAATGTCAAATGTGCCAATACAATAAAATGTTTTCACATGTATATGTGGAAAAAGGCGTGGCCGAGCATCCACGT ACAAAGCAGATTTTAGAAAA
Product: spore photoproduct
Products: NA
Alternate protein names: Spore Photoproduct
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MIYIFSAFYAEAKNIIDHYGLKKEKSPEMVRFDVFANESIRLVITGVGEINAAAAVSNIGGAYGISPDDEILNVGCGAGF SSDICLGSIFLGNKLTEQMTGRTFYPDMLMKANFRECEIVTVARVLNEGSDSVVYDMEAAAVYQAAAFFVGPHRMHFIKL VSDAGERIDQSKITELFALQEDKICGYIDRLLSVGGNKTSIDDKTRGENMADCNATDDTKSAWNIDRLTSDMRCSKVMGD QLAQLIKYCRLSGIDYKAVLDEYYTNGLLPCESKREGKKCLFELKQRLL
Sequences:
>Translated_289_residues MIYIFSAFYAEAKNIIDHYGLKKEKSPEMVRFDVFANESIRLVITGVGEINAAAAVSNIGGAYGISPDDEILNVGCGAGF SSDICLGSIFLGNKLTEQMTGRTFYPDMLMKANFRECEIVTVARVLNEGSDSVVYDMEAAAVYQAAAFFVGPHRMHFIKL VSDAGERIDQSKITELFALQEDKICGYIDRLLSVGGNKTSIDDKTRGENMADCNATDDTKSAWNIDRLTSDMRCSKVMGD QLAQLIKYCRLSGIDYKAVLDEYYTNGLLPCESKREGKKCLFELKQRLL >Mature_289_residues MIYIFSAFYAEAKNIIDHYGLKKEKSPEMVRFDVFANESIRLVITGVGEINAAAAVSNIGGAYGISPDDEILNVGCGAGF SSDICLGSIFLGNKLTEQMTGRTFYPDMLMKANFRECEIVTVARVLNEGSDSVVYDMEAAAVYQAAAFFVGPHRMHFIKL VSDAGERIDQSKITELFALQEDKICGYIDRLLSVGGNKTSIDDKTRGENMADCNATDDTKSAWNIDRLTSDMRCSKVMGD QLAQLIKYCRLSGIDYKAVLDEYYTNGLLPCESKREGKKCLFELKQRLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32048; Mature: 32048
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYIFSAFYAEAKNIIDHYGLKKEKSPEMVRFDVFANESIRLVITGVGEINAAAAVSNIG CEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCC GAYGISPDDEILNVGCGAGFSSDICLGSIFLGNKLTEQMTGRTFYPDMLMKANFRECEIV CCCCCCCCHHHEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCHHHHH TVARVLNEGSDSVVYDMEAAAVYQAAAFFVGPHRMHFIKLVSDAGERIDQSKITELFALQ HHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDKICGYIDRLLSVGGNKTSIDDKTRGENMADCNATDDTKSAWNIDRLTSDMRCSKVMGD CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH QLAQLIKYCRLSGIDYKAVLDEYYTNGLLPCESKREGKKCLFELKQRLL HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIYIFSAFYAEAKNIIDHYGLKKEKSPEMVRFDVFANESIRLVITGVGEINAAAAVSNIG CEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCC GAYGISPDDEILNVGCGAGFSSDICLGSIFLGNKLTEQMTGRTFYPDMLMKANFRECEIV CCCCCCCCHHHEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCHHHHH TVARVLNEGSDSVVYDMEAAAVYQAAAFFVGPHRMHFIKLVSDAGERIDQSKITELFALQ HHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDKICGYIDRLLSVGGNKTSIDDKTRGENMADCNATDDTKSAWNIDRLTSDMRCSKVMGD CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH QLAQLIKYCRLSGIDYKAVLDEYYTNGLLPCESKREGKKCLFELKQRLL HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA