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The map label for this gene is ygbK [H]

Identifier: 238923583

GI number: 238923583

Start: 1111686

End: 1112939

Strand: Direct

Name: ygbK [H]

Synonym: EUBREC_1205

Alternate gene names: 238923583

Gene position: 1111686-1112939 (Clockwise)

Preceding gene: 238923582

Following gene: 238923584

Centisome position: 32.23

GC content: 42.34

Gene sequence:

>1254_bases
ATGGTAAAGCTGTTGATCATAGCAGATGACTTTACCGGTGCATTGGATACCGGAATCCAGTTTGTGAATAAGGGAATTGC
CACCCAGGTATTTACAAAAATGCCGGAAGCTATCGGGGATATAGATGAGACAACAGAGGTTCTGGTTATAGATTCTGAGA
CCAGACCAATGCCTGCAGCTAAGGCATATGATGCTGTGAAAAATATTACAGGATGGGCAAAAGCAATTAAGATTCCTATT
ATTTTCAAAAAGACGGACTCTGCGCTCCGCGGGAATATCGGAAGTGAGCTTCAGGCAGTTTTGGACGGAAGCAGACACGA
CAAAGTTTATTTTCTGCCGGGGTATCCGAAGATAGACCGCTGTACGGTAAACGGAACTCACTACATACAGGGACAGCTTC
TTGAAAAAAGTGTATTCGGGCAGGATCCGTTTGAACCGGTAAAGATGTCGTACATACCTGATATTATCGCACAGCAGACA
TCTTTGAAATGTGCCTGTGTTAAGCGGAATGAAGCTTTGAATGATATAAAAAGCGATGAACGTATCGTAATCTGCGATGT
GGAAAAACACAAAGACATAGAAGAAAGGCTTGATGAATTGCAGGAAAAAGATGAGCTTTGTATTATTGCCGGATGTGCCG
CACTTGCGGAAGCGCTTGCCGACAAGCTCAGATTTGATGCAGTGAAGCCGCAAAGCTATAGGAAGAGTGAAAATTTTCTT
GTGGAATGTGGCAGCTTGAATATGATTACGCAAAATCAGCTTGACTATGCCGAAAAACACGGATTTTCAAGAATCCATAT
GACCGTAGAACAAAAATTGCAGAAGGATTATTACAGCACGCAGGCGGGCTTGGAGTTTTTGCGCAAAATGCAGGAAGAAT
GTGAAAAAGACAGATGTCTCATCATTGATTCCATAGACCGGGAAGAAGACAAAAAGGGCTTTATGGAAGCAAATAAGCTG
ACTATGAATGATGTAAGAACCTTGATTCCAACGGCACATGGACACGTAGCTGACCATTTGGCAGCAAATAAGCAGGATAC
GACAATACTTATGACAGGCGGCGATACTTTGATGGGGTATATGAAGCTGATAGGCTGTACCCAGATTACACCGGTATGTG
AGATAGAACAGGGTGTGGTTGTTTCCAATCTGAAAAATCACGGATTTGTGCAGCAGATAATATCCAAATCAGGTGGGTTC
GGAACCAAAGATGTACTGGTAAAGATTGCAGACAAAATATTAAATCAAAAATAA

Upstream 100 bases:

>100_bases
ACCTTGCAGGAAAAGGCGAATCGAATGAGTTAAGCCTTGTAAATTCAATTGACTATGCGACAAAGCTTGCAGTAAACAAA
AAATAGCGGGAGGAAATGCG

Downstream 100 bases:

>100_bases
ACAAAATTAAACAAGTTTAAAAGGAGAAGAAAAACATGAAACAGACAGAATTAAAAGGAATTATTACACCAATTTTAACA
CCAATGAACGCAGATGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MVKLLIIADDFTGALDTGIQFVNKGIATQVFTKMPEAIGDIDETTEVLVIDSETRPMPAAKAYDAVKNITGWAKAIKIPI
IFKKTDSALRGNIGSELQAVLDGSRHDKVYFLPGYPKIDRCTVNGTHYIQGQLLEKSVFGQDPFEPVKMSYIPDIIAQQT
SLKCACVKRNEALNDIKSDERIVICDVEKHKDIEERLDELQEKDELCIIAGCAALAEALADKLRFDAVKPQSYRKSENFL
VECGSLNMITQNQLDYAEKHGFSRIHMTVEQKLQKDYYSTQAGLEFLRKMQEECEKDRCLIIDSIDREEDKKGFMEANKL
TMNDVRTLIPTAHGHVADHLAANKQDTTILMTGGDTLMGYMKLIGCTQITPVCEIEQGVVVSNLKNHGFVQQIISKSGGF
GTKDVLVKIADKILNQK

Sequences:

>Translated_417_residues
MVKLLIIADDFTGALDTGIQFVNKGIATQVFTKMPEAIGDIDETTEVLVIDSETRPMPAAKAYDAVKNITGWAKAIKIPI
IFKKTDSALRGNIGSELQAVLDGSRHDKVYFLPGYPKIDRCTVNGTHYIQGQLLEKSVFGQDPFEPVKMSYIPDIIAQQT
SLKCACVKRNEALNDIKSDERIVICDVEKHKDIEERLDELQEKDELCIIAGCAALAEALADKLRFDAVKPQSYRKSENFL
VECGSLNMITQNQLDYAEKHGFSRIHMTVEQKLQKDYYSTQAGLEFLRKMQEECEKDRCLIIDSIDREEDKKGFMEANKL
TMNDVRTLIPTAHGHVADHLAANKQDTTILMTGGDTLMGYMKLIGCTQITPVCEIEQGVVVSNLKNHGFVQQIISKSGGF
GTKDVLVKIADKILNQK
>Mature_417_residues
MVKLLIIADDFTGALDTGIQFVNKGIATQVFTKMPEAIGDIDETTEVLVIDSETRPMPAAKAYDAVKNITGWAKAIKIPI
IFKKTDSALRGNIGSELQAVLDGSRHDKVYFLPGYPKIDRCTVNGTHYIQGQLLEKSVFGQDPFEPVKMSYIPDIIAQQT
SLKCACVKRNEALNDIKSDERIVICDVEKHKDIEERLDELQEKDELCIIAGCAALAEALADKLRFDAVKPQSYRKSENFL
VECGSLNMITQNQLDYAEKHGFSRIHMTVEQKLQKDYYSTQAGLEFLRKMQEECEKDRCLIIDSIDREEDKKGFMEANKL
TMNDVRTLIPTAHGHVADHLAANKQDTTILMTGGDTLMGYMKLIGCTQITPVCEIEQGVVVSNLKNHGFVQQIISKSGGF
GTKDVLVKIADKILNQK

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1011 [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=237, Percent_Identity=26.5822784810127, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 46541; Mature: 46541

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLLIIADDFTGALDTGIQFVNKGIATQVFTKMPEAIGDIDETTEVLVIDSETRPMPAA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH
KAYDAVKNITGWAKAIKIPIIFKKTDSALRGNIGSELQAVLDGSRHDKVYFLPGYPKIDR
HHHHHHHHHHHHHHHEEEEEEEECCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCE
CTVNGTHYIQGQLLEKSVFGQDPFEPVKMSYIPDIIAQQTSLKCACVKRNEALNDIKSDE
EEECCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCC
RIVICDVEKHKDIEERLDELQEKDELCIIAGCAALAEALADKLRFDAVKPQSYRKSENFL
EEEEEECHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHCCCCCEE
VECGSLNMITQNQLDYAEKHGFSRIHMTVEQKLQKDYYSTQAGLEFLRKMQEECEKDRCL
EEECCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIDSIDREEDKKGFMEANKLTMNDVRTLIPTAHGHVADHLAANKQDTTILMTGGDTLMGY
EEECCCCCHHHHHHHHHCCEEHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCHHHHHH
MKLIGCTQITPVCEIEQGVVVSNLKNHGFVQQIISKSGGFGTKDVLVKIADKILNQK
HHHHHHCCCCCHHCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLLIIADDFTGALDTGIQFVNKGIATQVFTKMPEAIGDIDETTEVLVIDSETRPMPAA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH
KAYDAVKNITGWAKAIKIPIIFKKTDSALRGNIGSELQAVLDGSRHDKVYFLPGYPKIDR
HHHHHHHHHHHHHHHEEEEEEEECCCHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCE
CTVNGTHYIQGQLLEKSVFGQDPFEPVKMSYIPDIIAQQTSLKCACVKRNEALNDIKSDE
EEECCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCC
RIVICDVEKHKDIEERLDELQEKDELCIIAGCAALAEALADKLRFDAVKPQSYRKSENFL
EEEEEECHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHCCCCCEE
VECGSLNMITQNQLDYAEKHGFSRIHMTVEQKLQKDYYSTQAGLEFLRKMQEECEKDRCL
EEECCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIDSIDREEDKKGFMEANKLTMNDVRTLIPTAHGHVADHLAANKQDTTILMTGGDTLMGY
EEECCCCCHHHHHHHHHCCEEHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCHHHHHH
MKLIGCTQITPVCEIEQGVVVSNLKNHGFVQQIISKSGGFGTKDVLVKIADKILNQK
HHHHHHCCCCCHHCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]