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The map label for this gene is yesN [H]

Identifier: 238923426

GI number: 238923426

Start: 946016

End: 947611

Strand: Direct

Name: yesN [H]

Synonym: EUBREC_1046

Alternate gene names: 238923426

Gene position: 946016-947611 (Clockwise)

Preceding gene: 238923425

Following gene: 238923427

Centisome position: 27.42

GC content: 40.6

Gene sequence:

>1596_bases
ATGCTTAAAGTATTATTGGTGGATGATGAGCCTTTTATAATACAGGGGCTTAAGGTGATCATTGATTGGGAAAATGAAGG
ATTTGAGATAGCAGGAATGGTCTCAAATGGAAAGGAAGCCCTGCAGTTTCTTGAAAATGAGAATGTGGATCTGGTCATAG
CCGATATAAGGATGCCGGAGATGACAGGACTTGAGCTGCTTGAGACTTTGAGAAAAGATAAAAAATCAGATGTGTATTTT
GTGATATTAAGCGGTTATGCAGATTTTAGCTATGCGCAGCAGGCTATGCAGAATGACTGTACGGATTACATACTAAAGCC
GGTGGACAAGGAGATGCTGCTTAAGGTACTAAACAAGGTTCTTGTGCTCAAAAACGAGAAAAACAAGATCGACGAGGATA
ACAAAAAGATGAAACAGGCATACCTTGCAGGACACCTGATATCTCTGATACGGGGCAAATATGATGAAGTAAACCTGAAC
TATGTAAAAGAAAATATGAGGTGTGAGGGTGGAGCAAGGTATGTTGAGATACAGGTGGAGCAGTTTCCGGCAGGTGATGA
GATACTCGATAGTGATATGAGAAGCTTACAGCGCAAGATGTACGAAAGCTGTGTTGCTTTTCTGGGGGCTGATTCGGCAC
ATTGTGTATTTGATGTATCGGTAAATGAAAAAGTGTATGACATAGGCTTTATATGCTCAGATTATATGGCAGAGGAAGCC
GCAAAAAACGAGAGAAAATATCTGGAGGATCTGAGAAGGTATATATGTGATAATACACAAAAGAATATAGTTATGCTGGT
CGGAAGAAAAGTATCAGATATATCAAAGATAGCCAGATCATACGGCAATGCATGTATGCTCAGGTCGTTTCAGGGATTTC
GCATAGTAAAGAGCATATATTACTATGAGGATGAAGTAAAGATATCGGCAGATGGAATAGTGCTTTGTAAAGATAGTCTG
GATGAGCTGCTTAGGACAGTGGAACAGAACAACCATGTTGAGATAAGAAATGCAGTTGCCACATTTTATGATGAGATGTC
CAGCATGGGTATGAATGGGGAAAGCATGAACTTAAATATCAATTATCTGTTGTTTCAGTTCATACACCTGGCAAGTGAGC
AGGATGATAATGTAAATCAGCAGGAGATTTTGCGACTCATAAGTGAGAGCAGCTTTAAGACCGGTATTGAGAGGGGAAGC
CGTGCACATATGACCAGATTTTGCTGTGAGTATGGTGATTATCTGTCGCAGCTTAGAAAAAATGTGTCAAGAGGTGTGAT
CGGCATGGTAGAAAAGGAAGTAAGAGACAATTATGCCACGAACATCACGCTTAAGAGCCTGAGTGAGAAGTATTATGTAA
ACAGTGCATACTTAGGGCAGCTTTTCAGAAAAAAATACGGACAGTCCTTTAAGGATTATCTGAACAATTACAGGATGGAA
CGTGCGGCAGAGCTTCTGCTTAGGACTGATAAGAAGATAATACAGATAGCAGAGGAAGTCGGATATCATGATATGGATTA
TTTTGTGAACAGGTTTATACAGGTAAAAGGCTGCACACCGGCGCGTTTCAGACGGCAGATGCAAAGTGGAGAATAA

Upstream 100 bases:

>100_bases
GTAACGGAATCTAAAGCAGTATTTGATGTGGACAGTGAGGAAGGCTGCGGTACGACTGTGATGATAAAAATACCGGAAAC
ATATTTATAGGAGATTTAAA

Downstream 100 bases:

>100_bases
TATATATTACTGCAAAACAGGGTAAATTATAGTTTTTTCGAGAAACTATAGTTTACCCTGTTTTTGACTATAGTTACTCC
GATTGTTTGAAAACTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MLKVLLVDDEPFIIQGLKVIIDWENEGFEIAGMVSNGKEALQFLENENVDLVIADIRMPEMTGLELLETLRKDKKSDVYF
VILSGYADFSYAQQAMQNDCTDYILKPVDKEMLLKVLNKVLVLKNEKNKIDEDNKKMKQAYLAGHLISLIRGKYDEVNLN
YVKENMRCEGGARYVEIQVEQFPAGDEILDSDMRSLQRKMYESCVAFLGADSAHCVFDVSVNEKVYDIGFICSDYMAEEA
AKNERKYLEDLRRYICDNTQKNIVMLVGRKVSDISKIARSYGNACMLRSFQGFRIVKSIYYYEDEVKISADGIVLCKDSL
DELLRTVEQNNHVEIRNAVATFYDEMSSMGMNGESMNLNINYLLFQFIHLASEQDDNVNQQEILRLISESSFKTGIERGS
RAHMTRFCCEYGDYLSQLRKNVSRGVIGMVEKEVRDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSFKDYLNNYRME
RAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQSGE

Sequences:

>Translated_531_residues
MLKVLLVDDEPFIIQGLKVIIDWENEGFEIAGMVSNGKEALQFLENENVDLVIADIRMPEMTGLELLETLRKDKKSDVYF
VILSGYADFSYAQQAMQNDCTDYILKPVDKEMLLKVLNKVLVLKNEKNKIDEDNKKMKQAYLAGHLISLIRGKYDEVNLN
YVKENMRCEGGARYVEIQVEQFPAGDEILDSDMRSLQRKMYESCVAFLGADSAHCVFDVSVNEKVYDIGFICSDYMAEEA
AKNERKYLEDLRRYICDNTQKNIVMLVGRKVSDISKIARSYGNACMLRSFQGFRIVKSIYYYEDEVKISADGIVLCKDSL
DELLRTVEQNNHVEIRNAVATFYDEMSSMGMNGESMNLNINYLLFQFIHLASEQDDNVNQQEILRLISESSFKTGIERGS
RAHMTRFCCEYGDYLSQLRKNVSRGVIGMVEKEVRDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSFKDYLNNYRME
RAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQSGE
>Mature_531_residues
MLKVLLVDDEPFIIQGLKVIIDWENEGFEIAGMVSNGKEALQFLENENVDLVIADIRMPEMTGLELLETLRKDKKSDVYF
VILSGYADFSYAQQAMQNDCTDYILKPVDKEMLLKVLNKVLVLKNEKNKIDEDNKKMKQAYLAGHLISLIRGKYDEVNLN
YVKENMRCEGGARYVEIQVEQFPAGDEILDSDMRSLQRKMYESCVAFLGADSAHCVFDVSVNEKVYDIGFICSDYMAEEA
AKNERKYLEDLRRYICDNTQKNIVMLVGRKVSDISKIARSYGNACMLRSFQGFRIVKSIYYYEDEVKISADGIVLCKDSL
DELLRTVEQNNHVEIRNAVATFYDEMSSMGMNGESMNLNINYLLFQFIHLASEQDDNVNQQEILRLISESSFKTGIERGS
RAHMTRFCCEYGDYLSQLRKNVSRGVIGMVEKEVRDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSFKDYLNNYRME
RAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQSGE

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=150, Percent_Identity=34, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788550, Length=146, Percent_Identity=28.0821917808219, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1790391, Length=107, Percent_Identity=30.8411214953271, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787987, Length=118, Percent_Identity=32.2033898305085, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788905, Length=118, Percent_Identity=33.0508474576271, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 61429; Mature: 61429

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVLLVDDEPFIIQGLKVIIDWENEGFEIAGMVSNGKEALQFLENENVDLVIADIRMPE
CEEEEEECCCCHHEECEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECCCCC
MTGLELLETLRKDKKSDVYFVILSGYADFSYAQQAMQNDCTDYILKPVDKEMLLKVLNKV
CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
LVLKNEKNKIDEDNKKMKQAYLAGHLISLIRGKYDEVNLNYVKENMRCEGGARYVEIQVE
HEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEEEE
QFPAGDEILDSDMRSLQRKMYESCVAFLGADSAHCVFDVSVNEKVYDIGFICSDYMAEEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHH
AKNERKYLEDLRRYICDNTQKNIVMLVGRKVSDISKIARSYGNACMLRSFQGFRIVKSIY
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEHHCCCHHHHHHHHH
YYEDEVKISADGIVLCKDSLDELLRTVEQNNHVEIRNAVATFYDEMSSMGMNGESMNLNI
HCCCCEEEECCCEEEEHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEH
NYLLFQFIHLASEQDDNVNQQEILRLISESSFKTGIERGSRAHMTRFCCEYGDYLSQLRK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NVSRGVIGMVEKEVRDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSFKDYLNNYRME
HHHCCHHHHHHHHHHCCHHCEEEHHHHCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
RAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQSGE
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLKVLLVDDEPFIIQGLKVIIDWENEGFEIAGMVSNGKEALQFLENENVDLVIADIRMPE
CEEEEEECCCCHHEECEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECCCCC
MTGLELLETLRKDKKSDVYFVILSGYADFSYAQQAMQNDCTDYILKPVDKEMLLKVLNKV
CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
LVLKNEKNKIDEDNKKMKQAYLAGHLISLIRGKYDEVNLNYVKENMRCEGGARYVEIQVE
HEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEEEE
QFPAGDEILDSDMRSLQRKMYESCVAFLGADSAHCVFDVSVNEKVYDIGFICSDYMAEEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHH
AKNERKYLEDLRRYICDNTQKNIVMLVGRKVSDISKIARSYGNACMLRSFQGFRIVKSIY
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEHHCCCHHHHHHHHH
YYEDEVKISADGIVLCKDSLDELLRTVEQNNHVEIRNAVATFYDEMSSMGMNGESMNLNI
HCCCCEEEECCCEEEEHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEH
NYLLFQFIHLASEQDDNVNQQEILRLISESSFKTGIERGSRAHMTRFCCEYGDYLSQLRK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NVSRGVIGMVEKEVRDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSFKDYLNNYRME
HHHCCHHHHHHHHHHCCHHCEEEHHHHCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
RAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQSGE
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]