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The map label for this gene is oppC [H]

Identifier: 238923358

GI number: 238923358

Start: 873516

End: 874574

Strand: Direct

Name: oppC [H]

Synonym: EUBREC_0978

Alternate gene names: 238923358

Gene position: 873516-874574 (Clockwise)

Preceding gene: 238923357

Following gene: 238923359

Centisome position: 25.32

GC content: 42.68

Gene sequence:

>1059_bases
ATGAAAGATAATATGAAGAGAGCTCCTTTCTCCACACAGATTGACCTTAGCAAGTTCAATATGAAGGATTTTGCCAAGGC
ATCAGATGAAGAGAAACGCCAGCAGGAGGTTATGGGTGAGTCAACTACCTTCTTTAAGGATGGTCTTAAGAGACTCCGTA
AAAATCCACTGGCTATGGGTTCTATTATAGTTTTGGTTTTACTTATTTTGGTTATTCTTCTGGCACCAAAGATTGTGCCT
TACGGCTATGCAGATATCGTTAAGGGTGCACAGAACTTAGGACCTTTCCAGTACAGCGATGCTGAGCAGGCACAGATTGA
TGCAGGTGAGAAGCTGTTCCCGCACATTTTTGGCACAGATGAGCTCGGAAGAGACTATTTTATCCGTGTTGTTTACGGAG
CTCGTGTTTCGCTGGGAGTCGGTGTGTTTGCATCACTGCTTGTGCTTATAATCGGTATCATTTACGGTTCCGTATCAGGC
TTCTGCGGTGGCAAGGTAGATATGGTTATGATGAGAATAGTAGATATCATTTATTCATTGCCGGATATGCTGCTCATCAT
TTTACTCGCAGTTGTATTAAATGAGGTGCTGACACCTGTAATAAAGGGTACAGTGCTTTCAAAGCTCGGTGTCAACATGA
TTGCACTTTTCATAGTGTTTGGATTGCTTTACTGGGTAGGAATGGCAAGACTTATAAGAGGTCAGATTCTTACCATTAAG
CAGAATGAGTACATTCTCGCAGCAAAGTGTATCGGAACATCATCAGCCCGCACTATCAGAAAACACATTTTACCGAACTG
TCTGTCAGTAATCATCATTACTACAGCGCTTCAGATACCATCAGCCATCTTTACTGAGAGTTATCTGTCATTTATCGGAC
TTGGTGTTTCGGCTCCTATGCCTTCACTTGGTTCGTTGGCAAATACAGCGCGTGGCGGACTCCAGAGCTACCCATTGCGT
CTTATTTTTCCGGCGCTTACGATTTGTATCATTGTTCTTACATTGAATCTTATCGGTGACGGCTTAAGAGATGCATTTGA
CCCTAAATTATCGAAATAG

Upstream 100 bases:

>100_bases
ACTTTTCCTTGCTGTCATCATGGTAGGCGCGAACCTCATTACAGATATTGTATACAAAGTGATTGATCCACGTATTAAGC
TTGATTAAGGAGAGATAAAG

Downstream 100 bases:

>100_bases
TAAGGAGTGAGTAAGATGGAAGATAATAAGTTTGTTCTTGAAGTATCTGATCTGCACACTACCTTCAAGACCGATAACGG
AGACGTATCAGCTGTAAACG

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKDNMKRAPFSTQIDLSKFNMKDFAKASDEEKRQQEVMGESTTFFKDGLKRLRKNPLAMGSIIVLVLLILVILLAPKIVP
YGYADIVKGAQNLGPFQYSDAEQAQIDAGEKLFPHIFGTDELGRDYFIRVVYGARVSLGVGVFASLLVLIIGIIYGSVSG
FCGGKVDMVMMRIVDIIYSLPDMLLIILLAVVLNEVLTPVIKGTVLSKLGVNMIALFIVFGLLYWVGMARLIRGQILTIK
QNEYILAAKCIGTSSARTIRKHILPNCLSVIIITTALQIPSAIFTESYLSFIGLGVSAPMPSLGSLANTARGGLQSYPLR
LIFPALTICIIVLTLNLIGDGLRDAFDPKLSK

Sequences:

>Translated_352_residues
MKDNMKRAPFSTQIDLSKFNMKDFAKASDEEKRQQEVMGESTTFFKDGLKRLRKNPLAMGSIIVLVLLILVILLAPKIVP
YGYADIVKGAQNLGPFQYSDAEQAQIDAGEKLFPHIFGTDELGRDYFIRVVYGARVSLGVGVFASLLVLIIGIIYGSVSG
FCGGKVDMVMMRIVDIIYSLPDMLLIILLAVVLNEVLTPVIKGTVLSKLGVNMIALFIVFGLLYWVGMARLIRGQILTIK
QNEYILAAKCIGTSSARTIRKHILPNCLSVIIITTALQIPSAIFTESYLSFIGLGVSAPMPSLGSLANTARGGLQSYPLR
LIFPALTICIIVLTLNLIGDGLRDAFDPKLSK
>Mature_352_residues
MKDNMKRAPFSTQIDLSKFNMKDFAKASDEEKRQQEVMGESTTFFKDGLKRLRKNPLAMGSIIVLVLLILVILLAPKIVP
YGYADIVKGAQNLGPFQYSDAEQAQIDAGEKLFPHIFGTDELGRDYFIRVVYGARVSLGVGVFASLLVLIIGIIYGSVSG
FCGGKVDMVMMRIVDIIYSLPDMLLIILLAVVLNEVLTPVIKGTVLSKLGVNMIALFIVFGLLYWVGMARLIRGQILTIK
QNEYILAAKCIGTSSARTIRKHILPNCLSVIIITTALQIPSAIFTESYLSFIGLGVSAPMPSLGSLANTARGGLQSYPLR
LIFPALTICIIVLTLNLIGDGLRDAFDPKLSK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=319, Percent_Identity=37.6175548589342, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787054, Length=308, Percent_Identity=36.038961038961, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1787760, Length=302, Percent_Identity=32.7814569536424, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=33.8983050847458, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1789964, Length=310, Percent_Identity=32.258064516129, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788505, Length=248, Percent_Identity=31.4516129032258, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787549, Length=266, Percent_Identity=28.1954887218045, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38452; Mature: 38452

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNMKRAPFSTQIDLSKFNMKDFAKASDEEKRQQEVMGESTTFFKDGLKRLRKNPLAMG
CCCCCCCCCCCCCCCHHHCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
SIIVLVLLILVILLAPKIVPYGYADIVKGAQNLGPFQYSDAEQAQIDAGEKLFPHIFGTD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHCHHCCCH
ELGRDYFIRVVYGARVSLGVGVFASLLVLIIGIIYGSVSGFCGGKVDMVMMRIVDIIYSL
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PDMLLIILLAVVLNEVLTPVIKGTVLSKLGVNMIALFIVFGLLYWVGMARLIRGQILTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QNEYILAAKCIGTSSARTIRKHILPNCLSVIIITTALQIPSAIFTESYLSFIGLGVSAPM
CCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSLGSLANTARGGLQSYPLRLIFPALTICIIVLTLNLIGDGLRDAFDPKLSK
CCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKDNMKRAPFSTQIDLSKFNMKDFAKASDEEKRQQEVMGESTTFFKDGLKRLRKNPLAMG
CCCCCCCCCCCCCCCHHHCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
SIIVLVLLILVILLAPKIVPYGYADIVKGAQNLGPFQYSDAEQAQIDAGEKLFPHIFGTD
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHCHHCCCH
ELGRDYFIRVVYGARVSLGVGVFASLLVLIIGIIYGSVSGFCGGKVDMVMMRIVDIIYSL
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PDMLLIILLAVVLNEVLTPVIKGTVLSKLGVNMIALFIVFGLLYWVGMARLIRGQILTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QNEYILAAKCIGTSSARTIRKHILPNCLSVIIITTALQIPSAIFTESYLSFIGLGVSAPM
CCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSLGSLANTARGGLQSYPLRLIFPALTICIIVLTLNLIGDGLRDAFDPKLSK
CCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]